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Citation for Study 16761

Citation title: "Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex".

Study name: "Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex".

This study is part of submission 16761 (Status: Published).

Citation

Liu F., Weir B.S., Damm U., Crous P.W., Wang Y., Liu B., Meng Z., & Cai L. 2015. Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex. Persoonia, 35: 63-86.

Authors

• Liu F. (submitter)
• Weir B.S. +64 9 574 4115
• Damm U. +49 3581 4760 5312
• Crous P.W.
• Wang Y. +8618798899302
• Liu B.
• Meng Z.
• Cai L.

Abstract

We investigated the phylogenetic diversity of 144Colletotrichumisolates associated withsymptomatic and asymptomatic tissues of Camellia sinensis and other Camellia spp. from seven provinces in China (Fujian, Guizhou, Henan, Jiangxi, Sichuan, Yunnan, Zhejiang), and sevenisolates obtained from other countries, including Indonesia, UK, and the USA. Based on the multi-locus(ACT, CAL, GAPDH, GS, ITS, TUB2) phylogenetic analysesand phenotypic characters, 11 species weredistinguished, including ninewell-characterisedspecies (i.e., C. alienum, C. boninense, C. cliviae, C. fioriniae, C. fructicola, C. gloeosporioides, C. karstii, C. siamense), one which was epitypified (C. camelliae), and two novel species (C. henanense and C. jiangxiense). Of these, C. camelliae proved to be the most dominant andprobably host specifictaxon occurring on Camellia. Colletotrichum jiangxienseis shown to be phylogenetically closely related to the coffee berry pathogen C. kahawae subsp. kahawae.Pathogenicity testsand pairwise homoplasy index test suggest that C. jiangxiense and C. kahawae subsp. kahawae are two independent species. This study represents the first reports of C. alienum and C. cliviae occurring on Camellia sinensis. In addition, our study demonstrated that the combineduse of ApMat and GS loci in phylogenetic analysis is able to resolve all currently accepted species in the C. gloeosporioides species complex.

Keywords

Camellia, Colletotrichum, morphology, phylogeny, tea plants

External links

• DOI: 10.3767/003158515X687597

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16761
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref23961,
  	 author = {Fang  Liu and Bevan S Weir and Ulrike  Damm and Pedro W. Crous and Yong  Wang and Bingxuan  Liu and Zhang  Meng and Lei  Cai},
  	 title = {Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex},
  	 year = {2015},
  	 keywords = {Camellia, Colletotrichum, morphology, phylogeny, tea plants},
  	 doi = {10.3767/003158515X687597},
  	 url = {http://},
  	 pmid = {},
  	 journal = {Persoonia},
  	 volume = {35},
  	 number = {},
  	 pages = {63--86},
  	 abstract = {We investigated the phylogenetic diversity of 144Colletotrichumisolates associated withsymptomatic and asymptomatic tissues of Camellia sinensis and other Camellia spp. from seven provinces in China (Fujian, Guizhou, Henan, Jiangxi, Sichuan, Yunnan, Zhejiang), and sevenisolates obtained from other countries, including Indonesia, UK, and the USA. Based on the multi-locus(ACT, CAL, GAPDH, GS, ITS, TUB2) phylogenetic analysesand phenotypic characters, 11 species weredistinguished, including ninewell-characterisedspecies (i.e., C. alienum, C. boninense, C. cliviae, C. fioriniae, C. fructicola, C. gloeosporioides, C. karstii, C. siamense), one which was epitypified (C. camelliae), and two novel species (C. henanense and C. jiangxiense). Of these, C. camelliae proved to be the most dominant andprobably host specifictaxon occurring on Camellia. Colletotrichum jiangxienseis shown to be phylogenetically closely related to the coffee berry pathogen C. kahawae subsp. kahawae.Pathogenicity testsand pairwise homoplasy index test suggest that C. jiangxiense and C. kahawae subsp. kahawae are two independent species. This study represents the first reports of C. alienum and C. cliviae occurring on Camellia sinensis. In addition, our study demonstrated that the combineduse of ApMat and GS loci in phylogenetic analysis is able to resolve all currently accepted species in the C. gloeosporioides species complex.}
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 23961
  AU  - Liu,Fang 
  AU  - Weir,Bevan S
  AU  - Damm,Ulrike 
  AU  - Crous,Pedro W.
  AU  - Wang,Yong 
  AU  - Liu,Bingxuan 
  AU  - Meng,Zhang 
  AU  - Cai,Lei 
  T1  - Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex
  PY  - 2015
  KW  - Camellia
  KW  - Colletotrichum
  KW  - morphology
  KW  - phylogeny
  KW  - tea plants
  UR  - http://dx.doi.org/10.3767/003158515X687597
  N2  - We investigated the phylogenetic diversity of 144Colletotrichumisolates associated withsymptomatic and asymptomatic tissues of Camellia sinensis and other Camellia spp. from seven provinces in China (Fujian, Guizhou, Henan, Jiangxi, Sichuan, Yunnan, Zhejiang), and sevenisolates obtained from other countries, including Indonesia, UK, and the USA. Based on the multi-locus(ACT, CAL, GAPDH, GS, ITS, TUB2) phylogenetic analysesand phenotypic characters, 11 species weredistinguished, including ninewell-characterisedspecies (i.e., C. alienum, C. boninense, C. cliviae, C. fioriniae, C. fructicola, C. gloeosporioides, C. karstii, C. siamense), one which was epitypified (C. camelliae), and two novel species (C. henanense and C. jiangxiense). Of these, C. camelliae proved to be the most dominant andprobably host specifictaxon occurring on Camellia. Colletotrichum jiangxienseis shown to be phylogenetically closely related to the coffee berry pathogen C. kahawae subsp. kahawae.Pathogenicity testsand pairwise homoplasy index test suggest that C. jiangxiense and C. kahawae subsp. kahawae are two independent species. This study represents the first reports of C. alienum and C. cliviae occurring on Camellia sinensis. In addition, our study demonstrated that the combineduse of ApMat and GS loci in phylogenetic analysis is able to resolve all currently accepted species in the C. gloeosporioides species complex.
  L3  - 10.3767/003158515X687597
  JF  - Persoonia
  VL  - 35
  IS  - 
  SP  - 63
  EP  - 86
  ER  -