@ARTICLE{TreeBASE2Ref16472,
author = {H. Thorsten Lumbsch and Ralf Lindemuth},
title = {Major lineages of Dothideomycetes (Ascomycota) inferred from SSU and LSU rDNA sequences.},
year = {2001},
keywords = {},
doi = {10.1016/S0953-7562(08)61945-0},
url = {},
pmid = {},
journal = {Molecular Ecology},
volume = {105},
number = {8},
pages = {901--908},
abstract = {The phylogeny of the Dothideomycetes was investigated using nucleotide sequences of SSU and LSU rDNA. New sequences of these regions from 18 species were aligned to the sequences of Aureobasidium xx obtained from Genbank and those of two representatives of Pezizomycetes used as outgroup. A combined data set of SSU and LSU rDNA was analysed using minimum evolution and maximum likelihood. The pseudoparaphysate taxa (Pleosporales incl. Melanommatales) form a monophyletic group. A separation of Melanommatales can be rejected using parametric bootstrapping and this supports previous results obtained from SSU rDNA studies. The aparaphysate loculoascomycetes form a sister-group to the Pleosporales, but this grouping has no bootstrap support. Within the aparaphysate species, two well-supported groups can be distinguished, the Dothideales s.str. and the Capnodiales with Myriangiales. The Myriangiales appear paraphyletic, but this has only poor bootstrap support. A monophyly of Dothideales incl. Capnodiales can be rejected with parametric bootstrapping, as well as a subdivision of the loculoascomycetes based on form and opening of the ascomata and ascus. The phylogeny of the aparaphysate taxa requires further studies.}
}
Citation for Study 817
Citation title:
"Major lineages of Dothideomycetes (Ascomycota) inferred from SSU and LSU rDNA sequences.".
This study was previously identified under the legacy study ID S675
(Status: Published).
Citation
Lumbsch H., & Lindemuth R. 2001. Major lineages of Dothideomycetes (Ascomycota) inferred from SSU and LSU rDNA sequences. Molecular Ecology, 105(8): 901-908.
Authors
Abstract
The phylogeny of the Dothideomycetes was investigated using nucleotide sequences of SSU and LSU rDNA. New sequences of these regions from 18 species were aligned to the sequences of Aureobasidium xx obtained from Genbank and those of two representatives of Pezizomycetes used as outgroup. A combined data set of SSU and LSU rDNA was analysed using minimum evolution and maximum likelihood. The pseudoparaphysate taxa (Pleosporales incl. Melanommatales) form a monophyletic group. A separation of Melanommatales can be rejected using parametric bootstrapping and this supports previous results obtained from SSU rDNA studies. The aparaphysate loculoascomycetes form a sister-group to the Pleosporales, but this grouping has no bootstrap support. Within the aparaphysate species, two well-supported groups can be distinguished, the Dothideales s.str. and the Capnodiales with Myriangiales. The Myriangiales appear paraphyletic, but this has only poor bootstrap support. A monophyly of Dothideales incl. Capnodiales can be rejected with parametric bootstrapping, as well as a subdivision of the loculoascomycetes based on form and opening of the ascomata and ascus. The phylogeny of the aparaphysate taxa requires further studies.
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S817
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref16472,
author = {H. Thorsten Lumbsch and Ralf Lindemuth},
title = {Major lineages of Dothideomycetes (Ascomycota) inferred from SSU and LSU rDNA sequences.},
year = {2001},
keywords = {},
doi = {10.1016/S0953-7562(08)61945-0},
url = {},
pmid = {},
journal = {Molecular Ecology},
volume = {105},
number = {8},
pages = {901--908},
abstract = {The phylogeny of the Dothideomycetes was investigated using nucleotide sequences of SSU and LSU rDNA. New sequences of these regions from 18 species were aligned to the sequences of Aureobasidium xx obtained from Genbank and those of two representatives of Pezizomycetes used as outgroup. A combined data set of SSU and LSU rDNA was analysed using minimum evolution and maximum likelihood. The pseudoparaphysate taxa (Pleosporales incl. Melanommatales) form a monophyletic group. A separation of Melanommatales can be rejected using parametric bootstrapping and this supports previous results obtained from SSU rDNA studies. The aparaphysate loculoascomycetes form a sister-group to the Pleosporales, but this grouping has no bootstrap support. Within the aparaphysate species, two well-supported groups can be distinguished, the Dothideales s.str. and the Capnodiales with Myriangiales. The Myriangiales appear paraphyletic, but this has only poor bootstrap support. A monophyly of Dothideales incl. Capnodiales can be rejected with parametric bootstrapping, as well as a subdivision of the loculoascomycetes based on form and opening of the ascomata and ascus. The phylogeny of the aparaphysate taxa requires further studies.}
}
- Show RIS reference
TY - JOUR
ID - 16472
AU - Lumbsch,H. Thorsten
AU - Lindemuth,Ralf
T1 - Major lineages of Dothideomycetes (Ascomycota) inferred from SSU and LSU rDNA sequences.
PY - 2001
UR - http://dx.doi.org/10.1016/S0953-7562(08)61945-0
N2 - The phylogeny of the Dothideomycetes was investigated using nucleotide sequences of SSU and LSU rDNA. New sequences of these regions from 18 species were aligned to the sequences of Aureobasidium xx obtained from Genbank and those of two representatives of Pezizomycetes used as outgroup. A combined data set of SSU and LSU rDNA was analysed using minimum evolution and maximum likelihood. The pseudoparaphysate taxa (Pleosporales incl. Melanommatales) form a monophyletic group. A separation of Melanommatales can be rejected using parametric bootstrapping and this supports previous results obtained from SSU rDNA studies. The aparaphysate loculoascomycetes form a sister-group to the Pleosporales, but this grouping has no bootstrap support. Within the aparaphysate species, two well-supported groups can be distinguished, the Dothideales s.str. and the Capnodiales with Myriangiales. The Myriangiales appear paraphyletic, but this has only poor bootstrap support. A monophyly of Dothideales incl. Capnodiales can be rejected with parametric bootstrapping, as well as a subdivision of the loculoascomycetes based on form and opening of the ascomata and ascus. The phylogeny of the aparaphysate taxa requires further studies.
L3 - 10.1016/S0953-7562(08)61945-0
JF - Molecular Ecology
VL - 105
IS - 8
SP - 901
EP - 908
ER -