@ARTICLE{TreeBASE2Ref15224,
author = {Theodorus H. de Koker and Karen K Nakasone and Jaques Haarhof and Harold H., Jr. Burdsall and Bernard J. H. Janse},
title = {Phylogenetic relationships of the genus Phanerochaete inferred from the internal transcribed spacer region.},
year = {2003},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Molecular Ecology},
volume = {107},
number = {},
pages = {1032--1040},
abstract = {Phanerochaete is a genus of resupinate homobasidiomycetes that are saprophytic on woody debris and logs. Morphological studies in the past indicated that Phanerochaete is a heterogeneous assemblage of species. In this study the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA was used to test the monophyly of the genus Phanerochaete and to infer phylogenetic relationships of the 24 taxa studied. Maximum parsimony, maximum likelihood, and Bayesian analyses do not support the monophyly of the genus. However, a core group of species represented by Phanerochaete velutina, P. chrysosporium, P. sordida, P. sanguinea and others are closely related and group together in a clade. Other common Phanerochaete species including Phanerochaete rimosa, P. chrysorhiza, P. omnivora, P. avellanea, P. tuberculata, P. flava, and P. allantospora, however, do not cluster with the core Phanerochaete group.}
}
Citation for Study 1088
Citation title:
"Phylogenetic relationships of the genus Phanerochaete inferred from the internal transcribed spacer region.".
This study was previously identified under the legacy study ID S994
(Status: Published).
Citation
De koker T., Nakasone K.K., Haarhof J., Burdsall H., & Janse B. 2003. Phylogenetic relationships of the genus Phanerochaete inferred from the internal transcribed spacer region. Molecular Ecology, 107: 1032-1040.
Authors
-
De koker T.
-
Nakasone K.K.
-
Haarhof J.
-
Burdsall H.
-
Janse B.
Abstract
Phanerochaete is a genus of resupinate homobasidiomycetes that are saprophytic on woody debris and logs. Morphological studies in the past indicated that Phanerochaete is a heterogeneous assemblage of species. In this study the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA was used to test the monophyly of the genus Phanerochaete and to infer phylogenetic relationships of the 24 taxa studied. Maximum parsimony, maximum likelihood, and Bayesian analyses do not support the monophyly of the genus. However, a core group of species represented by Phanerochaete velutina, P. chrysosporium, P. sordida, P. sanguinea and others are closely related and group together in a clade. Other common Phanerochaete species including Phanerochaete rimosa, P. chrysorhiza, P. omnivora, P. avellanea, P. tuberculata, P. flava, and P. allantospora, however, do not cluster with the core Phanerochaete group.
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S1088
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref15224,
author = {Theodorus H. de Koker and Karen K Nakasone and Jaques Haarhof and Harold H., Jr. Burdsall and Bernard J. H. Janse},
title = {Phylogenetic relationships of the genus Phanerochaete inferred from the internal transcribed spacer region.},
year = {2003},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Molecular Ecology},
volume = {107},
number = {},
pages = {1032--1040},
abstract = {Phanerochaete is a genus of resupinate homobasidiomycetes that are saprophytic on woody debris and logs. Morphological studies in the past indicated that Phanerochaete is a heterogeneous assemblage of species. In this study the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA was used to test the monophyly of the genus Phanerochaete and to infer phylogenetic relationships of the 24 taxa studied. Maximum parsimony, maximum likelihood, and Bayesian analyses do not support the monophyly of the genus. However, a core group of species represented by Phanerochaete velutina, P. chrysosporium, P. sordida, P. sanguinea and others are closely related and group together in a clade. Other common Phanerochaete species including Phanerochaete rimosa, P. chrysorhiza, P. omnivora, P. avellanea, P. tuberculata, P. flava, and P. allantospora, however, do not cluster with the core Phanerochaete group.}
}
- Show RIS reference
TY - JOUR
ID - 15224
AU - de Koker,Theodorus H.
AU - Nakasone,Karen K
AU - Haarhof,Jaques
AU - Burdsall,Harold H., Jr.
AU - Janse,Bernard J. H.
T1 - Phylogenetic relationships of the genus Phanerochaete inferred from the internal transcribed spacer region.
PY - 2003
UR -
N2 - Phanerochaete is a genus of resupinate homobasidiomycetes that are saprophytic on woody debris and logs. Morphological studies in the past indicated that Phanerochaete is a heterogeneous assemblage of species. In this study the internal transcribed spacer (ITS) region of the nuclear ribosomal DNA was used to test the monophyly of the genus Phanerochaete and to infer phylogenetic relationships of the 24 taxa studied. Maximum parsimony, maximum likelihood, and Bayesian analyses do not support the monophyly of the genus. However, a core group of species represented by Phanerochaete velutina, P. chrysosporium, P. sordida, P. sanguinea and others are closely related and group together in a clade. Other common Phanerochaete species including Phanerochaete rimosa, P. chrysorhiza, P. omnivora, P. avellanea, P. tuberculata, P. flava, and P. allantospora, however, do not cluster with the core Phanerochaete group.
L3 -
JF - Molecular Ecology
VL - 107
IS -
SP - 1032
EP - 1040
ER -
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