@ARTICLE{TreeBASE2Ref22041,
author = {Beatriz Ortiz-Santana and Daniel L. Lindner and Otto Miettinen and Alfredo Justo and David S. Hibbett},
title = {A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales)},
year = {2013},
keywords = {brown rot, molecular phylogeny},
doi = {},
url = {http://},
pmid = {},
journal = {Mycologia},
volume = {},
number = {},
pages = {},
abstract = {Phylogenetic relationships among members of the antrodia clade were investigated using molecular data from two nuclear ribosomal DNA regions, LSU and ITS. A total of 123 species representing 26 genera producing a brown rot were included in the present study. Three DNA datasets (combined LSU-ITS dataset, LSU dataset, ITS dataset) comprising sequences of 449 isolates were evaluated using three different phylogenetic analyses (Maximum Likelihood, Maximum Parsimony, Bayesian inference). We present a phylogenetic overview of the five main groups recovered: the fibroporia, laetiporus, postia, laricifomes and core antrodia groups. Not all of the main groups received strong support in the analyses, requiring further research. We were able to identify a number of well-supported clades within the main groups.}
}
Citation for Study 14283
Citation title:
"A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales)".
Study name:
"A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales)".
This study is part of submission 14283
(Status: Published).
Citation
Ortiz-santana B., Lindner D.L., Miettinen O., Justo A., & Hibbett D. 2013. A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales). Mycologia, .
Authors
-
Ortiz-santana B.
(submitter)
6082319526
-
Lindner D.L.
608-231-9511
-
Miettinen O.
-
Justo A.
-
Hibbett D.
Abstract
Phylogenetic relationships among members of the antrodia clade were investigated using molecular data from two nuclear ribosomal DNA regions, LSU and ITS. A total of 123 species representing 26 genera producing a brown rot were included in the present study. Three DNA datasets (combined LSU-ITS dataset, LSU dataset, ITS dataset) comprising sequences of 449 isolates were evaluated using three different phylogenetic analyses (Maximum Likelihood, Maximum Parsimony, Bayesian inference). We present a phylogenetic overview of the five main groups recovered: the fibroporia, laetiporus, postia, laricifomes and core antrodia groups. Not all of the main groups received strong support in the analyses, requiring further research. We were able to identify a number of well-supported clades within the main groups.
Keywords
brown rot, molecular phylogeny
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S14283
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref22041,
author = {Beatriz Ortiz-Santana and Daniel L. Lindner and Otto Miettinen and Alfredo Justo and David S. Hibbett},
title = {A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales)},
year = {2013},
keywords = {brown rot, molecular phylogeny},
doi = {},
url = {http://},
pmid = {},
journal = {Mycologia},
volume = {},
number = {},
pages = {},
abstract = {Phylogenetic relationships among members of the antrodia clade were investigated using molecular data from two nuclear ribosomal DNA regions, LSU and ITS. A total of 123 species representing 26 genera producing a brown rot were included in the present study. Three DNA datasets (combined LSU-ITS dataset, LSU dataset, ITS dataset) comprising sequences of 449 isolates were evaluated using three different phylogenetic analyses (Maximum Likelihood, Maximum Parsimony, Bayesian inference). We present a phylogenetic overview of the five main groups recovered: the fibroporia, laetiporus, postia, laricifomes and core antrodia groups. Not all of the main groups received strong support in the analyses, requiring further research. We were able to identify a number of well-supported clades within the main groups.}
}
- Show RIS reference
TY - JOUR
ID - 22041
AU - Ortiz-Santana,Beatriz
AU - Lindner,Daniel L.
AU - Miettinen,Otto
AU - Justo,Alfredo
AU - Hibbett,David S.
T1 - A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales)
PY - 2013
KW - brown rot
KW - molecular phylogeny
UR - http://dx.doi.org/
N2 - Phylogenetic relationships among members of the antrodia clade were investigated using molecular data from two nuclear ribosomal DNA regions, LSU and ITS. A total of 123 species representing 26 genera producing a brown rot were included in the present study. Three DNA datasets (combined LSU-ITS dataset, LSU dataset, ITS dataset) comprising sequences of 449 isolates were evaluated using three different phylogenetic analyses (Maximum Likelihood, Maximum Parsimony, Bayesian inference). We present a phylogenetic overview of the five main groups recovered: the fibroporia, laetiporus, postia, laricifomes and core antrodia groups. Not all of the main groups received strong support in the analyses, requiring further research. We were able to identify a number of well-supported clades within the main groups.
L3 -
JF - Mycologia
VL -
IS -
ER -