@ARTICLE{TreeBASE2Ref21170,
author = {Bharti Sharma and Elena M Kramer},
title = {The MADS Box Gene Family of the Lower Eudicot Aquilegia x coerulea ?Origami?},
year = {2012},
keywords = {MADS box genes, Aquilegia, gene duplication},
doi = {},
url = {http://},
pmid = {},
journal = {Annals of the Missouri Botanical Garden},
volume = {},
number = {},
pages = {},
abstract = {The MADS-box genes form a large family of pan-eukaryotic transcription factors that are involved in various aspects of plant growth and development, particularly reproduction. To understand the extent of their conservation and divergence in the emerging model genus Aquilegia L., we have annotated 47 MADS-box containing loci from the recently released A. x coerulea ?Origami? genome sequence. Phylogenetic analysis of these sequences along with those previously identified from Arabidopsis (DC.) Heynh. and Oryza L. demonstrates that we were able to recover members of all major subfamilies with the exception of clear Mβ representatives. The evolution of the Aquilegia type I loci is similar to what has been observed for other angiosperms in exhibiting relatively recent gene radiation events. In contrast, the type II loci are distributed across 12 subfamilies that were established before the diversification of the angiosperms. Overall, EST (Expressed Sequence Tag) data exists for twenty of these loci so further characterization of gene expression patterns will be an important next step. This characterization of Aquilegia MADS-box transcription factors thereby lays the foundation for many crucial studies on the development and evolution of Aquilegia as well as the conservation of function across the MADS box gene family.}
}
Citation for Study 13212
Citation title:
"The MADS Box Gene Family of the Lower Eudicot Aquilegia x coerulea ?Origami?".
Study name:
"The MADS Box Gene Family of the Lower Eudicot Aquilegia x coerulea ?Origami?".
This study is part of submission 13212
(Status: Published).
Citation
Sharma B., & Kramer E.M. 2012. The MADS Box Gene Family of the Lower Eudicot Aquilegia x coerulea ?Origami?. Annals of the Missouri Botanical Garden, .
Authors
-
Sharma B.
6173847820
-
Kramer E.M.
(submitter)
617-496-3460
Abstract
The MADS-box genes form a large family of pan-eukaryotic transcription factors that are involved in various aspects of plant growth and development, particularly reproduction. To understand the extent of their conservation and divergence in the emerging model genus Aquilegia L., we have annotated 47 MADS-box containing loci from the recently released A. x coerulea ?Origami? genome sequence. Phylogenetic analysis of these sequences along with those previously identified from Arabidopsis (DC.) Heynh. and Oryza L. demonstrates that we were able to recover members of all major subfamilies with the exception of clear Mβ representatives. The evolution of the Aquilegia type I loci is similar to what has been observed for other angiosperms in exhibiting relatively recent gene radiation events. In contrast, the type II loci are distributed across 12 subfamilies that were established before the diversification of the angiosperms. Overall, EST (Expressed Sequence Tag) data exists for twenty of these loci so further characterization of gene expression patterns will be an important next step. This characterization of Aquilegia MADS-box transcription factors thereby lays the foundation for many crucial studies on the development and evolution of Aquilegia as well as the conservation of function across the MADS box gene family.
Keywords
MADS box genes, Aquilegia, gene duplication
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S13212
- Other versions:
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- Show BibTeX reference
@ARTICLE{TreeBASE2Ref21170,
author = {Bharti Sharma and Elena M Kramer},
title = {The MADS Box Gene Family of the Lower Eudicot Aquilegia x coerulea ?Origami?},
year = {2012},
keywords = {MADS box genes, Aquilegia, gene duplication},
doi = {},
url = {http://},
pmid = {},
journal = {Annals of the Missouri Botanical Garden},
volume = {},
number = {},
pages = {},
abstract = {The MADS-box genes form a large family of pan-eukaryotic transcription factors that are involved in various aspects of plant growth and development, particularly reproduction. To understand the extent of their conservation and divergence in the emerging model genus Aquilegia L., we have annotated 47 MADS-box containing loci from the recently released A. x coerulea ?Origami? genome sequence. Phylogenetic analysis of these sequences along with those previously identified from Arabidopsis (DC.) Heynh. and Oryza L. demonstrates that we were able to recover members of all major subfamilies with the exception of clear Mβ representatives. The evolution of the Aquilegia type I loci is similar to what has been observed for other angiosperms in exhibiting relatively recent gene radiation events. In contrast, the type II loci are distributed across 12 subfamilies that were established before the diversification of the angiosperms. Overall, EST (Expressed Sequence Tag) data exists for twenty of these loci so further characterization of gene expression patterns will be an important next step. This characterization of Aquilegia MADS-box transcription factors thereby lays the foundation for many crucial studies on the development and evolution of Aquilegia as well as the conservation of function across the MADS box gene family.}
}
- Show RIS reference
TY - JOUR
ID - 21170
AU - Sharma,Bharti
AU - Kramer,Elena M
T1 - The MADS Box Gene Family of the Lower Eudicot Aquilegia x coerulea ?Origami?
PY - 2012
KW - MADS box genes
KW - Aquilegia
KW - gene duplication
UR - http://dx.doi.org/
N2 - The MADS-box genes form a large family of pan-eukaryotic transcription factors that are involved in various aspects of plant growth and development, particularly reproduction. To understand the extent of their conservation and divergence in the emerging model genus Aquilegia L., we have annotated 47 MADS-box containing loci from the recently released A. x coerulea ?Origami? genome sequence. Phylogenetic analysis of these sequences along with those previously identified from Arabidopsis (DC.) Heynh. and Oryza L. demonstrates that we were able to recover members of all major subfamilies with the exception of clear Mβ representatives. The evolution of the Aquilegia type I loci is similar to what has been observed for other angiosperms in exhibiting relatively recent gene radiation events. In contrast, the type II loci are distributed across 12 subfamilies that were established before the diversification of the angiosperms. Overall, EST (Expressed Sequence Tag) data exists for twenty of these loci so further characterization of gene expression patterns will be an important next step. This characterization of Aquilegia MADS-box transcription factors thereby lays the foundation for many crucial studies on the development and evolution of Aquilegia as well as the conservation of function across the MADS box gene family.
L3 -
JF - Annals of the Missouri Botanical Garden
VL -
IS -
ER -
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