@ARTICLE{TreeBASE2Ref25434,
author = {Philppa A French and Gillian Kim Brown and Michael J. Bayly},
title = {Incongruent patterns of nuclear and chloroplast variation in Correa (Rutaceae): introgression and biogeography in south-eastern Australia},
year = {2016},
keywords = {Phylogenetic Incongruence; Hybridization; Lower Murray Basin; Vicariance; Suture Zone; Taxonom},
doi = {10.1007/s00606-016-1277-7},
url = {http://},
pmid = {},
journal = {Plant Systematics and Evolution},
volume = {302},
number = {},
pages = {447--468},
abstract = {Correa (family Rutaceae) is a genus endemic to southern Australia, in which chloroplast introgression between species has previously been inferred. The current study aimed to document the extent of incongruence between molecular markers and taxonomy, describe patterns of geographic variation, and infer genetic and biogeographic processes important in the history of the genus. Sampling focused on subg. Correa (nine species) and included 166 samples from 95 localities. Samples were genotyped at the chloroplast loci trnL-trnF and trnK and the nuclear ITS regions, either by direct sequencing or by restriction digests of PCR products. Both chloroplast and ITS datasets resolved subg. Persistens (two species mostly from wet forests) as distinct from those of subg. Correa. Within subg. Correa chloroplast and ITS lineages were largely incongruent with each other and with current taxonomy, but both datasets showed similar geographic patterns. In each dataset there was one lineage mostly restricted to western South Australia and Western Australia, and one lineage widespread in eastern South Australia, Victoria, Tasmania, New South Wales and Queensland. The split between these geographic lineages occurs in South Australia, on the western side of the Murray basin; it is sharply defined in the chloroplast results, whereas the distributions of ITS lineages overlap. The geographic patterns and incongruence exhibited by both ITS and chloroplast markers provide evidence for substantial chloroplast and nuclear introgression between species. Geographic distributions of genetic lineages are consistent with divergence caused by a historical vicariance event across the lower Murray basin and subsequent reconnection of populations.}
}
Taxa for matrix 34770 of Study 18702
Citation title:
"Incongruent patterns of nuclear and chloroplast variation in Correa (Rutaceae): introgression and biogeography in south-eastern Australia".
Study name:
"Incongruent patterns of nuclear and chloroplast variation in Correa (Rutaceae): introgression and biogeography in south-eastern Australia".
This study is part of submission 18702
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
2123924 |
Correa aemula MJB1985 |
686000
|
5831104
|
2123987 |
Correa aemula PAF119 |
686000
|
5831104
|
2123946 |
Correa aemula PAF144 |
686000
|
5831104
|
2123976 |
Correa aemula PAF158 |
686000
|
5831104
|
2123949 |
Correa aemula RJA4097 |
686000
|
5831104
|
2124127 |
Correa aemula x relexa PAF123 |
|
|
2123914 |
Correa alba RJA3201 |
686001
|
8530601
|
2124133 |
Correa alba alba MJB1876 |
|
10915876
|
2124126 |
Correa alba pannosa PAF110 |
686002
|
|
2123990 |
Correa alba pannosa PAF165 |
686002
|
|
2123945 |
Correa alba pannosa PAF175 |
686002
|
|
2123940 |
Correa backhouseana coriacea PGW5910 |
|
8441369
|
2123926 |
Correa backhouseana coriacea RJA3903 |
|
8441369
|
2123927 |
Correa backhouseana coriacea RJA3908 |
|
8441369
|
2123966 |
Correa backhouseana coriacea RJA3946 |
|
8441369
|
2123938 |
Correa backhouseana coriacea RJA3963 |
|
8441369
|
2123947 |
Correa backhouseana coriacea RJA3988 |
|
8441369
|
2124132 |
Correa backhouseana coriacea RJA4004 |
|
8441369
|
2123955 |
Correa backhouseana coriacea RJA4089 |
|
8441369
|
2123974 |
Correa backhouseana orbicularis PAF154 |
|
8441420
|
2123960 |
Correa backhouseana orbicularis PAF162 |
|
8441420
|
2123956 |
Correa bauerlenii RJA3794 |
|
5831107
|
2123962 |
Correa calycina calycina PAF168 |
686008
|
10915883
|
2123950 |
Correa calycina halmaturorum PAF151 |
|
8441461
|
2123943 |
Correa decumbens PAF142 |
686009
|
5831108
|
2123930 |
Correa decumbens PAF150 |
686009
|
5831108
|
2123968 |
Correa eburnea PAF164 |
686010
|
8441479
|
2123937 |
Correa glabra RJA4571 |
686011
|
8441506
|
2123965 |
Correa glabra glabra MJB2171 |
|
8441507
|
2123964 |
Correa glabra glabra PAF115 |
|
8441507
|
2123917 |
Correa glabra glabra PAF116 |
|
8441507
|
2123922 |
Correa glabra glabra RJAsn2 |
|
8441507
|
2124130 |
Correa glabra leucoclada BJC769 |
|
8441539
|
2123918 |
Correa glabra leucoclada PAF170 |
|
8441539
|
2123931 |
Correa lawrenceana grampiana MJB1988 |
|
8441748
|
2123942 |
Correa lawrenceana latrobeana MJB1867 |
|
8441698
|
2123985 |
Correa pulchella PAF148 |
76960
|
1839061
|
2123963 |
Correa pulchella RJA3917 |
76960
|
1839061
|
2124135 |
Correa pulchella RJA3922 |
76960
|
1839061
|
2123929 |
Correa pulchella RJA3959 |
76960
|
1839061
|
2123961 |
Correa pulchella RJA3981 |
76960
|
1839061
|
2123928 |
Correa pulchella RJA3991 |
76960
|
1839061
|
2124131 |
Correa pulchella RJA3993 |
76960
|
1839061
|
2123933 |
Correa pulchella RJA4092 |
76960
|
1839061
|
2123989 |
Correa reflexa PAF108 |
67920
|
5873059
|
2123915 |
Correa reflexa PAF111 |
67920
|
5873059
|
2123920 |
Correa reflexa PAF137 |
67920
|
5873059
|
2123932 |
Correa reflexa PAF140 |
67920
|
5873059
|
2123921 |
Correa reflexa RJA3658 |
67920
|
5873059
|
2123936 |
Correa reflexa RJA4513 |
67920
|
5873059
|
2123941 |
Correa reflexa angustifolia MJB1986 |
|
8442068
|
2123958 |
Correa reflexa angustifolia PAF121 |
|
8442068
|
2123925 |
Correa reflexa insularis PAF147 |
|
8442132
|
2124134 |
Correa reflexa lobata PAF102 |
|
8441878
|
2123952 |
Correa reflexa reflexa MJB2181 |
686023
|
10915913
|
2123959 |
Correa reflexa reflexa MJB2197 |
686023
|
10915913
|
2123944 |
Correa reflexa reflexa MTM357 |
686023
|
10915913
|
2123913 |
Correa reflexa reflexa MTM380 |
686023
|
10915913
|
2123919 |
Correa reflexa reflexa PAF100 |
686023
|
10915913
|
2123954 |
Correa reflexa reflexa PAF105 |
686023
|
10915913
|
2123988 |
Correa reflexa reflexa PAF113 |
686023
|
10915913
|
2123948 |
Correa reflexa reflexa PAF173 |
686023
|
10915913
|
2123939 |
Correa reflexa reflexa PAF200 |
686023
|
10915913
|
2123967 |
Correa reflexa reflexa RJA3043 |
686023
|
10915913
|
2123953 |
Correa reflexa reflexa RJA3746 |
686023
|
10915913
|
2123972 |
Correa reflexa scabridula MJB2172 |
|
8442007
|
2123916 |
Correa reflexa scabridula PAF166 |
|
8442007
|
2123969 |
Correa reflexa scabridula PAF171 |
|
8442007
|
2123982 |
Correa reflexa scabridula PAF172 |
|
8442007
|
2123981 |
Correa reflexa speciosa MJB2196 |
|
8441977
|
2123934 |
Correa reflexa x backhouseana PAF156 |
|
|
2124128 |
Correa reflexa x backhouseana PAF160 |
|
|
2124129 |
Leionema rotundifolium PIF34469 |
|
8449028
|
2124125 |
Nematolepis squamea squamea PIF34811 |
282613
|
8449405
|