@ARTICLE{TreeBASE2Ref20204,
author = {Nicholas A Milani and Daniel Paul Lawrence and A. Elizabeth Arnold and Hans VanEtten},
title = {Inheritance of Pisatin Demethylase (PDA) among the Fusaria and closely related taxa},
year = {2011},
keywords = {horizontal gene transfer, PDA, Fusarium},
doi = {},
url = {http://},
pmid = {},
journal = {Fungal Genetics and Biology},
volume = {},
number = {},
pages = {},
abstract = {Host specificity of plant pathogens is dictated by the presence of genes that enable the pathogen to circumvent host defenses. Upon recognition of the pathogen, plants initiate defense responses that can include the production of antimicrobial compounds such as phytoalexins. Nectria haematococca mating population VI (MPVI) is a filamentous ascomycete that contains a cluster of genes known as the pea pathogenicity (PEP) cluster in which the pisatin demethylase (PDA) gene resides. The PDA gene product is responsible for the detoxification of the phytoalexin pisatin, which is produced by the pea plant (Pisum sativum). Thus, PDA allows the fungus to colonize the host and become pathogenic. It has been proposed that the evolutionary origin of PDA and the PEP cluster is explained by a horizontal gene transfer (HGT) event. The observations supporting this hypothesis include the location of the PEP cluster which resides on a conditionally dispensable (CD) chromosome, the phylogenetically discontinuous distribution of the cluster among closely related species, and bias in GC content and codon usage as compared to other regions of the genome. The phylogenetic analyses presented here coupled with previous work provides robust support for the hypothesis of HGT of PDA and perhaps the entire PEP cluster or the whole CD chromosome between closely related fungi. }
}
Taxa for tree 106680 of Study 12103

Citation title:
"Inheritance of Pisatin Demethylase (PDA) among the Fusaria and closely related taxa".

Study name:
"Inheritance of Pisatin Demethylase (PDA) among the Fusaria and closely related taxa".

This study is part of submission 12103
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
2875110 |
Bathynectes longispina OTU021 |
|
529843
|
2875088 |
Callinectes ornatus OTU050 |
53941
|
2707702
|
2874989 |
Callinectes sapidus OTU051 |
6763
|
2707699
|
2874987 |
Cancer pagurus OTU001 |
6755
|
529831
|
2875063 |
Caphyra cf fulva OTU093 |
|
|
2875001 |
Caphyra sp B OTU095 |
|
|
2874971 |
Carcinus maenas OTU007 |
6759
|
2707733
|
2874983 |
Charybdis annulata OTU100 |
|
6601334
|
2874955 |
Charybdis feriata OTU103 |
|
6762521
|
2874977 |
Charybdis hellerii OTU104 |
600358
|
2708188
|
2875058 |
Charybdis lucifera OTU108 |
|
5596472
|
2875100 |
Charybdis sagamiensis OTU112 |
|
|
2874953 |
Cronius ruber OTU116 |
600353
|
2707711
|
2875047 |
Goniosupradens acutifrons OTU118 |
|
|
2875081 |
Goniosupradens erythrodactylus OTU119 |
|
|
2874997 |
Goniosupradens hawaiensis OTU120 |
|
|
2875035 |
Goniosupradens obtusifrons OTU121 |
|
|
2875038 |
Liocarcinus depurator OTU024 |
313354
|
5473367
|
2874998 |
Liocarcinus maculatus OTU026 |
586226
|
6201211
|
2875056 |
Lissocarcinus arkati OTU122 |
|
|
2874981 |
Lissocarcinus holothuricola OTU123 |
|
|
2875074 |
Lissocarcinus laevis OTU124 |
|
4800050
|
2874984 |
Lissocarcinus polybiodes OTU126 |
|
6089654
|
2875104 |
Lupocyclus quinquedentatus OTU055 |
|
4800056
|
2874958 |
Necora puber OTU031 |
338210
|
5442275
|
2875085 |
Ovalipes stephensoni floridanus OTU017 |
|
|
2875116 |
Portunus Achelous gibbesii OTU060 |
372818
|
2707718
|
2875087 |
Portunus Achelous spinimanus OTU065 |
|
|
2875075 |
Portunus Cycloachelous granulatus OTU067 |
|
4800066
|
2875094 |
Portunus Xiphonectes arabicus OTU082 |
|
|
2875096 |
Portunus sanguinolentus hawaiiensis OTU078 |
|
|
2875102 |
Portunus ventralis OTU081 |
372820
|
2707723
|
2875086 |
Raymanninus schmitti OTU014 |
|
4800080
|
2875048 |
Thalamita admete OTU127 |
412132
|
4800083
|
2874966 |
Thalamita aff admete OTU128 |
|
|
2875068 |
Thalamita bevisi OTU130 |
|
4800096
|
2875046 |
Thalamita bouvieri OTU131 |
|
|
2874979 |
Thalamita cf gatavakensis sp A OTU138 |
|
|
2875005 |
Thalamita cf gatavakensis sp B OTU137 |
|
|
2874986 |
Thalamita chaptalii OTU132 |
|
|
2875043 |
Thalamita gloriensis OTU151 |
|
4800100
|
2875066 |
Thalamita granosimana OTU140 |
|
|
2875034 |
Thalamita integra OTU141 |
|
4800102
|
2874954 |
Thalamita kagosimensis OTU142 |
|
|
2875012 |
Thalamita mitsiensis OTU146 |
|
|
2875030 |
Thalamita parvidens OTU149 |
|
|
2874969 |
Thalamita philippinensis OTU143 |
|
|
2875000 |
Thalamita picta OTU150 |
|
4800110
|
2875045 |
Thalamita quadrilobata OTU155 |
|
6089656
|
2875054 |
Thalamita savignyi OTU158 |
|
6089698
|
2875050 |
Thalamita seurati OTU159 |
652872
|
5604123
|
2875089 |
Thalamitoides spinigera OTU166 |
|
|
2875112 |
Thalamitoides tridens OTU167 |
|
4800128
|
2874965 |
Thranita aff rubridens OTU157 |
|
|
2875049 |
Thranita coeruleipes OTU133 |
|
4800092
|
2875015 |
Thranita crenata OTU134 |
|
|
2875016 |
Thranita danae OTU135 |
|
6089691
|
2875053 |
Thranita pseudopelsarti OTU154 |
|
|
2875077 |
Thranita rubridens OTU156 |
|
6089696
|
2875064 |
Thranita spinicarpa OTU161 |
|
6239989
|
2875080 |
Thranita spinimana OTU163 |
|
|
2875025 |
Trierarchus cf cooperi sp A OTU168 |
|
|
2875055 |
Trierarchus cf cooperi sp B OTU169 |
|
|
2875051 |
Trierarchus rotundifrons OTU170 |
|
6312207
|
2874982 |
Trierarchus woodmasoni OTU171 |
|
|
2875010 |
Zygita murinae OTU173 |
|
|