@ARTICLE{TreeBASE2Ref16118,
author = {Karin Kiontke and Nicholas P. Gavin and Yevgeniy Raynes and Casey Roehrig and Fabio Piano and David H. A. Fitch},
title = {Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss.},
year = {2004},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {},
number = {},
pages = {},
abstract = {Despite the prominence of Caenorhabditis elegans as a major developmental and genetic model system, its phylogenetic relationship to its closest relatives has not been resolved. Resolution of these relationships is necessary for studying the steps that underlie life history, genomic, and morphological evolution of this important system. Using data from five different nuclear genes from 10 Caenorhabditis species currently in culture, we find a well-resolved phylogeny that reveals three striking patterns in the evolution of this animal group: (1) hermaphroditism has evolved independently in C. elegans and its close relative C. briggsae; (2) there is a large degree of intron turnover within Caenorhabditis and intron losses are much more frequent than intron gains; and (3) despite the lack of marked morphological diversity, more genetic disparity is present within this one genus than has occurred within all vertebrates.}
}
Taxa for tree 86652 of Study 1185
Citation title:
"Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss.".
This study was previously identified under the legacy study ID S1094
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
1796360 |
Aliquandostipite khaoyaiensis CBS 118232 |
112102
|
1638243
|
1796340 |
Apiosporina collinsii CBS 118973 |
415587
|
3037155
|
1796365 |
Apiosporina morbosa dimosp |
|
|
1796355 |
Asterina chrysophylli VIC 42823 |
|
1204756
|
1796371 |
Asterina melastomatis VIC 42822 |
|
1596354
|
1796321 |
Asterotexis cucurbitacearum PMA M 0141224 |
|
1150784
|
1796352 |
Asterotexis cucurbitacearum VIC 24814 |
|
3034461
|
1796326 |
Aulographum hederae CPC 21373 |
|
3070485
|
1796328 |
Aulographum hederae MFLUCC 13 0001 |
|
1188198
|
1796390 |
Batistinula gallesiae VIC 42514 |
|
1329550
|
1796348 |
Botryosphaeria dothidea CBS 115476 |
55169
|
3088922
|
1796347 |
Capnodium coffeae CBS 147 52 |
93495
|
3072823
|
1796386 |
Capnodium salicinum CBS 131 34 |
93487
|
3076395
|
1796366 |
Diplodia mutila CBS 431 82 |
85927
|
3872346
|
1796381 |
Dissoconium aciculare CBS 204 89 |
112489
|
3024928
|
1796383 |
Dissoconium commune CBS 110747 |
470125
|
9730506
|
1796364 |
Dissoconium dekkeri CBS 111282 |
112483
|
3043793
|
1796336 |
Gibbera conferta CBS 191 53 |
0
|
3169842
|
1796369 |
Gloniopsis arciformis GKM L166A |
|
|
1796374 |
Glonium circumserpens CBS 123342 |
574773
|
3282236
|
1796354 |
Glonium circumserpens CBS 123343 |
574773
|
3282236
|
1796367 |
Helicomyces roseus CBS 283 51 |
301202
|
3134313
|
1796343 |
Hysterium angustatum CBS 123334 |
574775
|
3120670
|
1796382 |
Hysteropatella clavispora CBS 247 34 |
100029
|
3284189
|
1796392 |
Inocyclus angularis VIC 39747 |
|
|
1796350 |
Inocyclus angularis VIC 39748 |
|
|
1796391 |
Inocyclus angularis VIC 39749 |
|
|
1796388 |
Jahnula aquatica R68 1 |
435389
|
3150097
|
1796351 |
Jahnula bipileata F49 1 |
435390
|
|
1796376 |
Jahnula seychellensis SS2113 1 |
435393
|
3294549
|
1796344 |
Lembosia abaxialis VIC 42825 |
|
|
1796385 |
Leptoxyphium fumago CBS 123 26 |
5474
|
3027019
|
1796361 |
Macrophomina phaseolina CBS 227 33 |
35725
|
3181295
|
1796373 |
Mycosphaerella marksii CBS 110942 |
112484
|
3234158
|
1796380 |
Mycosphaerella punctiformis CBS 113265 |
43215
|
3872311
|
1796378 |
Parmularia styracis VIC 42447 |
|
3054700
|
1796346 |
Parmularia styracis VIC 42450 |
|
1171897
|
1796363 |
Parmularia styracis VIC 42587 |
|
3054700
|
1796375 |
Patellaria cf atrata BCC 28876 |
0
|
1451687
|
1796357 |
Patellaria cf atrata BCC 28877 |
0
|
1451687
|
1796379 |
Phaeocryptopus gaeumannii CBS 267 37 |
64360
|
3035865
|
1796342 |
Phaeotrichum benjaminii CBS 541 72 |
134357
|
3198603
|
1796372 |
Prillieuxina baccharidincola VIC 42817 |
|
3184822
|
1796370 |
Pseudocercospora fijiensis OSC 100622 |
513417
|
3200282
|
1796387 |
Pseudocercospora vitis CPC 11595 |
337446
|
3092874
|
1796359 |
Psiloglonium simulans CBS 206 34 |
|
|
1796349 |
Rhytidhysteron rufulum CBS 306 38 |
37885
|
3036795
|
1796337 |
Saccharomyces cerevisiae DAOM 216365 |
4932
|
442770
|
1796358 |
Schizothyrium pomi CBS 228 57 |
286617
|
3216152
|
1796353 |
Schizothyrium pomi CBS 486 50 |
286617
|
3216152
|
1796384 |
Teratosphaeria cf bellula CPC 18280 |
|
|
1796345 |
Teratosphaeria fibrillosa CBS 121707 |
237585
|
3140515
|
1796377 |
Teratosphaeria stellenboschiana CBS 116428 |
|
|
1796356 |
Teratosphaeria suberosa CPC 11032 |
|
|
1796334 |
Trichodelitschia bisporula CBS 262 69v2 |
0
|
3166848
|
1796368 |
Tubeufia paludosa CBS 245 49 |
318725
|
3203503
|
1796339 |
Venturia inaequalis CBS 176 42 |
5025
|
3072818
|
1796362 |
Venturia populina CBS 256 38 |
217476
|
3065987
|
1796389 |
Zasmidium cellare CBS 146 36 |
395010
|
3277280
|