@ARTICLE{TreeBASE2Ref24990,
author = {Yuho Ando and Hayato Masuya and Keiichi Motohashi and Riikka Linnakoski and Yuichi Yamaoka},
title = {Phylogenetic relationship of Japanese isolates belonging to the Grosmannia piceiperda complex (Ophiostomatales)},
year = {2016},
keywords = {Ascomycota, Bark beetle, Conifer, Leptographium, Species complex},
doi = {10.1016/j.myc.2015.12.001},
url = {http://dx.doi.org/10.1016/j.myc.2015.12.001},
pmid = {},
journal = {Mycoscience},
volume = {57},
number = {},
pages = {123--135},
abstract = {This study was conducted to explore the morphological and phylogenetic relationships of the Japanese isolates tentatively identified as the Grosmannia piceiperda complex (Ophiostomatales, Ascomycota; asexual morph = Leptographium s.l.). The phylogenetic analyses of the internal transcribed spacer 2 and nuclear large subunit ribosomal RNA gene regions showed that the Japanese isolates belong to the G. piceiperda complex. The analyses of the partial β-tubulin and translation elongation factor-1 alpha (EF-1α) genes separated the species complex into nine and 13 lineages, respectively. Based on the β-tubulin sequences, morphologically distinct groups were included in the same clades. However, based on the EF-1α sequences, these groups could be separated into different lineages. Detailed morphological observations supported this result and confirmed that the Japanese lineages are distinct. Among the 13 recognized lineages, the Japanese isolates were separated into 11 lineages, including G. aenigmatica, G. laricis, G. piceiperda D, as well as eight lineages representing undescribed taxa.}
}
Taxa for matrix 32973 of Study 18144
Citation title:
"Phylogenetic relationship of Japanese isolates belonging to the Grosmannia piceiperda complex (Ophiostomatales)".
Study name:
"Phylogenetic relationship of Japanese isolates belonging to the Grosmannia piceiperda complex (Ophiostomatales)".
This study is part of submission 18144
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
1978575 |
Grosmannia aenigmatica AY536184 |
360465
|
9815813
|
1978529 |
Grosmannia aenigmatica YCC111 |
360465
|
9815813
|
1978492 |
Grosmannia aenigmatica YCC72 |
360465
|
9815813
|
1978581 |
Grosmannia huntii DQ354937 |
155651
|
10190557
|
1978577 |
Grosmannia huntii DQ354938 |
155651
|
10190557
|
1978586 |
Grosmannia laricis DQ062041 |
150547
|
1406047
|
1978585 |
Grosmannia laricis DQ062042 |
150547
|
1406047
|
1978531 |
Grosmannia laricis YCC277 |
150547
|
1406047
|
1978448 |
Grosmannia laricis YCC349 |
150547
|
1406047
|
1978491 |
Grosmannia laricis YCC389 |
150547
|
1406047
|
1978572 |
Grosmannia laricis YCC440 |
150547
|
1406047
|
1978536 |
Grosmannia laricis YCC441 |
150547
|
1406047
|
1978474 |
Grosmannia laricis YCC488 |
150547
|
1406047
|
1978532 |
Grosmannia laricis YCC590 |
150547
|
1406047
|
1978573 |
Grosmannia piceiperda B JF280077 |
|
|
1978582 |
Grosmannia piceiperda B JF280078 |
|
|
1978587 |
Grosmannia piceiperda B JF280079 |
|
|
1978579 |
Grosmannia piceiperda C JF280072 |
|
|
1978584 |
Grosmannia piceiperda C JF280073 |
|
|
1978578 |
Grosmannia piceiperda C JF280074 |
|
|
1978576 |
Grosmannia piceiperda C JF280075 |
|
|
1978583 |
Grosmannia piceiperda C JF280076 |
|
|
1978574 |
Grosmannia piceiperda D JF280070 |
|
|
1978580 |
Grosmannia piceiperda D JF280071 |
|
|
1978452 |
Grosmannia sp. D YCC242 |
|
|
1978447 |
Grosmannia sp. D YCC549 |
|
|
1978485 |
Grosmannia sp. D YCC593 |
|
|
1978455 |
Grosmannia sp. D YCC625 |
|
|
1978517 |
Grosmannia sp. D YCC626 |
|
|
1978458 |
Grosmannia sp. D YCC631 |
|
|
1978469 |
Grosmannia sp. D YCC694 |
|
|
1978472 |
Grosmannia sp. D YCC695 |
|
|
1978520 |
Grosmannia sp. D YCC710 |
|
|
1978519 |
Grosmannia sp. D YCC711 |
|
|
1978493 |
Grosmannia sp. D YCC724 |
|
|
1978468 |
Grosmannia sp. D YCC733 |
|
|
1978534 |
Grosmannia sp. D YCC734 |
|
|
1978507 |
Grosmannia sp. D YCC735 |
|
|
1978487 |
Grosmannia sp. D YCC736 |
|
|
1978477 |
Grosmannia sp. J1 YCC348 |
|
|
1978479 |
Grosmannia sp. J1 YCC614 |
|
|
1978537 |
Grosmannia sp. J1 YCC705 |
|
|
1978484 |
Grosmannia sp. J1 YCC723 |
|
|
1978538 |
Grosmannia sp. J2 YCC312 |
|
|
1978513 |
Grosmannia sp. J2 YCC314 |
|
|
1978525 |
Grosmannia sp. J3 YCC495 |
|
|
1978514 |
Grosmannia sp. J3 YCC496 |
|
|
1978466 |
Grosmannia sp. J3 YCC497 |
|
|
1978550 |
Grosmannia sp. J4 YCC318 |
|
|
1978541 |
Grosmannia sp. J4 YCC399 |
|
|
1978443 |
Grosmannia sp. J4 YCC591 |
|
|
1978490 |
Grosmannia sp. J5 YCC300 |
|
|
1978482 |
Grosmannia sp. J5 YCC416 |
|
|
1978459 |
Grosmannia sp. J5 YCC417 |
|
|
1978453 |
Grosmannia sp. J5 YCC468 |
|
|
1978528 |
Grosmannia sp. J5 YCC615 |
|
|
1978500 |
Grosmannia sp. J5 YCC679 |
|
|
1978470 |
Grosmannia sp. J5 YCC681 |
|
|
1978510 |
Grosmannia sp. J6 YCC432 |
|
|
1978499 |
Grosmannia sp. J6 YCC433 |
|
|
1978515 |
Grosmannia sp. J6 YCC470 |
|
|
1978495 |
Grosmannia sp. J7 YCC452 |
|
|
1978547 |
Grosmannia sp. J7 YCC453 |
|
|
1978539 |
Grosmannia sp. J7 YCC455 |
|
|
1978444 |
Grosmannia sp. J7 YCC501 |
|
|
1978456 |
Grosmannia sp. J8 YCC507 |
|
|
1978524 |
Grosmannia sp. J8 YCC508 |
|
|