@ARTICLE{TreeBASE2Ref18661,
author = {John Delton Hanson and J. L. Indorf and Vicki J Swier and Robert D Bradley},
title = {Molecular divergence in the Oryzomys palustris complex: evidence for multiple species.},
year = {2010},
keywords = {},
doi = {10.1644/08-MAMM-A-342.1.Key},
url = {},
pmid = {},
journal = {Journal of Mammaogy},
volume = {91},
number = {2},
pages = {336--347},
abstract = {Nucleotide sequences from 94 individuals representing the Oryzomys palustris complex (O. palustris and O. couesi) were examined to assess phylogenetic relationships and taxonomic boundaries. Sequence data from the entire mitochondrial cytochrome-b (1,143 bp), a portion of exon 1 of the nuclear interphotoreceptor retinoid binding protein (1,266 bp), and intron 2 of the alcohol dehydrogenase 1 (580 bp) genes were analyzed using phylogenetic methods (maximum parsimony and Bayesian inference). In the cytochrome-b analysis, individuals recognized as O. palustris and O. couesi formed reciprocally monophyletic clades supporting their recognition as species; however, additional phylogenetically informative phylogroups were present within each of the 2 nominate clades. In addition, levels of genetic divergence within the currently recognized taxa exceeded values normally associated with intra-species variation. Together, the phylogenetic and genetic divergence data imply that consideration should be given to recognizing 4 additional species in this complex.}
}
Taxa for matrix 4552 of Study 10170

Citation title:
"Molecular divergence in the Oryzomys palustris complex: evidence for multiple species.".

This study was previously identified under the legacy study ID S2514
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
254873 |
Aegialomys xantheolus TK134912 |
|
|
254884 |
Holochilus sciureus TK61941 |
|
|
254864 |
Melanomys chrysomelas TK121417 |
|
|
254861 |
Nectomys squamipes TK63841 |
29117
|
2482353
|
254857 |
Oryzomys couesi ASK2193 |
160399
|
2482438
|
254858 |
Oryzomys couesi TK102040 |
160399
|
2482438
|
254860 |
Oryzomys couesi TK119183 |
160399
|
2482438
|
254859 |
Oryzomys couesi TK150231 |
160399
|
2482438
|
254880 |
Oryzomys couesi TK72660 |
160399
|
2482438
|
254883 |
Oryzomys couesi TK72661 |
160399
|
2482438
|
254872 |
Oryzomys mexicanus TK126521 |
|
|
254889 |
Oryzomys mexicanus TK126728 |
|
|
254877 |
Oryzomys mexicanus TK126763 |
|
|
254871 |
Oryzomys mexicanus TK138048 |
|
|
254882 |
Oryzomys mexicanus TK150198 |
|
|
254875 |
Oryzomys mexicanus TK150242 |
|
|
254867 |
Oryzomys mexicanus TK19578 |
|
|
254885 |
Oryzomys mexicanus TK45816 |
|
|
254886 |
Oryzomys mexicanus TK93244 |
|
|
261528 |
Oryzomys palustris EVGL02 |
37020
|
2482456
|
254863 |
Oryzomys palustris EVGL06 |
37020
|
2482456
|
254870 |
Oryzomys palustris NK52091 |
37020
|
2482456
|
261529 |
Oryzomys palustris NK64701 |
37020
|
2482456
|
254862 |
Oryzomys palustris SBI2 |
37020
|
2482456
|
254887 |
Oryzomys palustris SCVA15 |
37020
|
2482456
|
254876 |
Oryzomys species1 NK101623 |
|
|
254888 |
Oryzomys species1 NK101644 |
|
|
254865 |
Oryzomys species2 RMT4689 |
|
|
254866 |
Oryzomys species2 RMT4695 |
|
|
254868 |
Oryzomys texensis TK111000 |
0
|
2721445
|
254874 |
Oryzomys texensis TK27995 |
0
|
2721445
|
254869 |
Oryzomys texensis TK52128 |
0
|
2721445
|
254890 |
Oryzomys texensis TK91240 |
0
|
2721445
|
254881 |
Sigmodontomys alfari TK135621 |
218838
|
2482626
|