@ARTICLE{TreeBASE2Ref18754,
author = {Jorge Manuel Santos and Viviana G. Correia and Alan John Lander Phillips},
title = {Primers for mating-type diagnosis in Diaporthe and Phomopsis: their use in teleomorph induction in vitro and biological species definition.},
year = {2010},
keywords = {},
doi = {10.1016/j.funbio.2010.01.007},
url = {},
pmid = {},
journal = {Fungal Biology},
volume = {114},
number = {2-3},
pages = {255--270},
abstract = {Sexual reproduction in ascomycete fungi is governed by the mating-type (MAT) locus. The MAT loci of Diaporthe and its Phomopsis anamorphs differ in only one gene: MAT1-1-1 in mating-type MAT1-1 and MAT1-2-1 in mating-type MAT1-2. In order to diagnose mating-types in Diaporthe and Phomopsis and evaluate their usefulness in teleomorph induction in vitro and biological species delimitation, we designed primers that amplify part of the MAT1-1-1 and MAT1-2-1 genes. MAT phylogenies were generated and compared with ITS and EF1-? phylograms. Species recognized in the EF1-? phylogeny corresponded directly with those determined in the MAT phylogenies. ITS was shown to be highly variable resulting in a large number of phylogenetic species that were discordant with MAT and EF1-? species. Mating experiments were conducted to evaluate the existence of reproductive barriers between some isolates, and their anamorphic morphologies were compared. The primers proved to be useful in the mating-type diagnosis of isolates, selection of compatible mating pairs, and in the assessment of biological species boundaries.}
}
Taxa for matrix 4835 of Study 10264

Citation title:
"Primers for mating-type diagnosis in Diaporthe and Phomopsis: their use in teleomorph induction in vitro and biological species definition.".

This study was previously identified under the legacy study ID S2623
(Status: Published).
Taxa
Return to matrix row view
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 272689 |
Diaporthe G type AB199327 |
|
|
| 272693 |
Diaporthe W type AB199325 |
|
|
| 268123 |
Diaporthe alleghaniensis CBS 495 72 |
0
|
3207850
|
| 272687 |
Diaporthe ambigua CBS 114015 |
73123
|
3097777
|
| 272697 |
Diaporthe ambigua CBS 123210 |
73123
|
3097777
|
| 272688 |
Diaporthe ambigua CBS 123211 |
73123
|
3097777
|
| 272696 |
Diaporthe angelicae Ph C032 1 |
230357
|
3280025
|
| 272692 |
Diaporthe angelicae Ph C068 2 |
230357
|
3280025
|
| 272690 |
Diaporthe aspalathi CBS 117169 |
626713
|
|
| 268083 |
Diaporthe hickoriae CBS 145 26 |
0
|
3146695
|
| 272691 |
Diaporthe lusitanicae CBS 123212 |
573504
|
|
| 272698 |
Diaporthe lusitanicae Ph C170 1 |
|
|
| 268095 |
Diaporthe melonis CBS 507 78 |
222581
|
3192710
|
| 268152 |
Diaporthe neotheicola CBS 123209 |
573505
|
|
| 268127 |
Diaporthe neotheicola Di C004 6 |
573505
|
|
| 268108 |
Diaporthe neotheicola Ph C182 1 |
573505
|
|
| 268074 |
Diaporthe neotheicola Ph C195 1 |
573505
|
|
| 268181 |
Diaporthe sp Di C005 1 |
|
|
| 268188 |
Diaporthe sp Di C005 2 |
|
|
| 268079 |
Diaporthe sp Di C005 8 |
|
|
| 268139 |
Diaporthe sp Di C007 |
|
|
| 268101 |
Diaporthe stewartii CBS 193 36 |
0
|
3164146
|
| 268147 |
Diaporthe viticola 111 |
265709
|
3131318
|
| 272695 |
Diaporthe viticola CBS 113201 |
265709
|
3131318
|
| 268159 |
Diaporthe viticola Di C006 2 |
265709
|
3131318
|
| 272694 |
Phomopsis amygdali 11A |
83182
|
3039577
|
| 272686 |
Phomopsis amygdali 16A |
83182
|
3039577
|
| 268178 |
Phomopsis cotoneastri CBS 439 82 |
0
|
3198688
|
| 268099 |
Phomopsis cotoneastri Di C005 5 |
0
|
3198688
|
| 268114 |
Phomopsis cotoneastri Di C005 6 |
0
|
3198688
|
| 268110 |
Phomopsis dauci CBS 315 49 |
0
|
3184013
|
| 268072 |
Phomopsis phoenicicola CBS 161 64 |
0
|
3121651
|
| 268144 |
Phomopsis sp Ph AC002 |
|
|
| 268153 |
Phomopsis sp Ph AC003 |
|
|
| 268135 |
Phomopsis sp Ph C169 1 |
|
|
| 268105 |
Phomopsis sp Ph C174 1 |
|
|
| 268171 |
Phomopsis sp Ph C189 1 |
|
|
| 268165 |
Phomopsis sp Ph C194 1 |
|
|
| 268117 |
Phomopsis viticola 114 |
83180
|
3132874
|