@ARTICLE{TreeBASE2Ref21631,
author = {Paul Andrew Covey and Mia Hanson and Brett Kuwitzky and Kimberly Webb},
title = {Multilocus analysis using fungal pathogenicity genes to describe Fusarium oxysporum from Sugar Beet},
year = {2013},
keywords = {Fusarium oxysporum f. sp. betae, Fusarium yellows, Sugar beet, Beta vulgaris, Effectors, Pathogen, AMOVA, Arlequin},
doi = {},
url = {http://},
pmid = {},
journal = {Phytopathology},
volume = {},
number = {},
pages = {},
abstract = {Sugar beet (Beta vulgaris L.) Fusarium yellows is caused by Fusarium oxysporum Schlechtend.:Fr. f. sp. betae (D. Stewart) and leads to significant reductions in root yield, sucrose percentage, juice purity, and storability. F. oxysporum f. sp. betae can be highly variable and many F. oxysporum isolated from symptomatic sugar beet are non-pathogenic. Identifying pathogenicity factors and their diversity in the F. oxysporum f. sp. betae population, could further understanding of how this pathogen causes disease and provide molecular markers to rapidly identify pathogenic isolates. This study used several previously described fungal pathogenicity genes (Fmk1, Fow1, Pda1, PelA, PelD, Pep1, Prt1, Rho1, Sge1, Six1, Six6, Snf1, and Ste12) as genetic markers, in a population of 26 pathogenic and non-pathogenic isolates of F. oxysporum originally isolated from symptomatic sugar beet. Of the genes investigated, 6 were present in all F. oxysporum isolates from sugar beet (Fmk1, Fow1, PelA, Rho1, Snf1, and Ste12), and 7 were found to be dispersed within the population (Pda1, PelD, Pep1, Prt1, Sge1, Six1, and Six6). Of these, Fmk1, Fow1, PelA, Rho1, Sge1, Snf1, and Ste12 were significant in describing clade designations and PelD, and Prt1 were significant for describing pathogenicity in F. oxysporum f. sp. betae. }
}
Taxa for matrix 15552 of Study 13754

Citation title:
"Multilocus analysis using fungal pathogenicity genes to describe Fusarium oxysporum from Sugar Beet".

Study name:
"Multilocus analysis using fungal pathogenicity genes to describe Fusarium oxysporum from Sugar Beet".

This study is part of submission 13754
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
964069 |
Fusarium oxysporum F.sp betae F46 Sge1 |
5507
|
1449647
|
964061 |
Fusarium graminearum PH-1 Sge1 |
194397
|
3103141
|
964058 |
Fusarium oxysporum F.sp betae F19 Sge1 |
5507
|
1449647
|
964075 |
Fusarium oxysporum F.sp betae F38 Sge1 |
5507
|
1449647
|
964094 |
Fusarium oxysporum F.sp betae Fo17 Sge1 |
5507
|
1449647
|
964074 |
Fusarium oxysporum F.sp betae Fob13 |
5507
|
1449647
|
964059 |
Fusarium oxysporum F.sp betae Fob216c Sge1 |
5507
|
1449647
|
964078 |
Fusarium oxysporum F.sp conglutinans PHW808 Sge1 |
5507
|
1449647
|
964076 |
Fusarium oxysporum F.sp cubense II5 Sge1 |
5507
|
1449647
|
964083 |
Fusarium oxysporum F.sp lycopersici Fol4287 Sge1 |
5507
|
1449647
|
964066 |
Fusarium oxysporum F.sp lycopersici MN25 Sge1 |
5507
|
1449647
|
964093 |
Fusarium oxysporum F.sp melonis NRRL 26406 Sge1 |
5507
|
1449647
|
964071 |
Fusarium oxysporum F.sp pisi HDV247 Sge1 |
5507
|
1449647
|
964060 |
Fusarium oxysporum F.sp radicis-lycopersici CL57 Sge1 |
5507
|
1449647
|
964065 |
Fusarium oxysporum F.sp raphani PHW815 Sge1 |
5507
|
1449647
|
964064 |
Fusarium oxysporum F.sp spinaciae FUS001 Sge1 |
5507
|
1449647
|
964089 |
Fusarium oxysporum F.sp spinaciae FUS003 Sge1 |
5507
|
1449647
|
964068 |
Fusarium oxysporum F.sp spinaciae FUS004 Sge1 |
5507
|
1449647
|
964091 |
Fusarium oxysporum F.sp vasinfectum NRRL 25433 Sge1 |
5507
|
1449647
|
964062 |
Fusarium oxysporum F.sp. betae F17 Sge1 |
5507
|
1449647
|
964084 |
Fusarium oxysporum F.sp. betae Fob257a Sge1 |
5507
|
1449647
|
964073 |
Fusarium oxysporum F02-78 Sge1 |
5507
|
1449647
|
964086 |
Fusarium oxysporum F05-157 Sge1 |
5507
|
1449647
|
964063 |
Fusarium oxysporum F05-284 Sge1 |
5507
|
1449647
|
964072 |
Fusarium oxysporum F05-77 Sge1 |
5507
|
1449647
|
964085 |
Fusarium oxysporum F14 Sge1 |
5507
|
1449647
|
964079 |
Fusarium oxysporum F15 Sge1 |
5507
|
1449647
|
964090 |
Fusarium oxysporum F29 Sge1 |
5507
|
1449647
|
964092 |
Fusarium oxysporum F30 Sge1 |
5507
|
1449647
|
964077 |
Fusarium oxysporum F33 Sge1 |
5507
|
1449647
|
964082 |
Fusarium oxysporum FOSC 3a Sge1 |
5507
|
1449647
|
964087 |
Fusarium oxysporum Fo23 Sge1 |
5507
|
1449647
|
964067 |
Fusarium oxysporum Fo25 Sge1 |
5507
|
1449647
|
964070 |
Fusarium oxysporum Fo27 Sge1 |
5507
|
1449647
|
964081 |
Fusarium oxysporum Fo29 Sge1 |
5507
|
1449647
|
964088 |
Fusarium oxysporum Fo47 Sge1 |
5507
|
1449647
|
964080 |
Fusarium verticillioides Strain 7600 Sge1 |
117187
|
3193856
|