@ARTICLE{TreeBASE2Ref22638,
author = {Phillip Ray Hollingsworth and Andrew M Simons and James A Fordyce and C Darrin Hulsey},
title = {Explosive diversification following a benthic to pelagic shift in freshwater fishes},
year = {2013},
keywords = {Cyprinidae; divergence times; open adaptive zone; radiation},
doi = {},
url = {http://},
pmid = {},
journal = {BMC Evolutionary Biology},
volume = {},
number = {},
pages = {},
abstract = {Background: Interspecific divergence along a benthic to pelagic habitat axis is ubiquitous in freshwater fishes inhabiting lentic environments. In this study, we examined the influence of this habitat axis on the macroevolution of a diverse, lotic radiation using mtDNA and nDNA phylogenies for eastern North America?s most species-rich freshwater fish clade, the open posterior myodome (OPM) cyprinids. We used ancestral state reconstruction to identify the earliest benthic to pelagic transition in this group and generated fossil-calibrated estimates of when this shift occurred. This transition could have represented evolution into a novel adaptive zone, and therefore, we tested for a period of accelerated lineage accumulation after this historical habitat shift.
Results: Ancestral state reconstructions inferred a similar and concordant region of our mtDNA and nDNA based gene trees as representing the shift from benthic to pelagic habitats in the OPM clade. Two independent tests conducted on each gene tree suggested an increased diversification rate after this inferred habitat transition. Furthermore, lineage through time analyses indicated rapid early cladogenesis in the clade arising after the benthic to pelagic shift.
Conclusions: A burst of diversification followed the earliest benthic to pelagic transition during the radiation of OPM cyprinids in eastern North America. As such, the benthic/pelagic habitat axis has likely influenced the generation of biodiversity across disparate freshwater ecosystems.
}
}
Taxa for tree 89889 of Study 15034
Citation title:
"Explosive diversification following a benthic to pelagic shift in freshwater fishes".
Study name:
"Explosive diversification following a benthic to pelagic shift in freshwater fishes".
This study is part of submission 15034
(Status: Published).
Taxa
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| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 1977715 |
Caldanaerobacter subterraneus tengcongensis_NP_621824.1 |
111823
|
3605093
|
| 1977713 |
Caldanaerobacter subterraneus yonseiensis_ERM91335.1 |
111823
|
3605093
|
| 1977704 |
Coprothermobacter platensis WP_018962516.1 |
108819
|
2555101
|
| 1977716 |
Thermoanaerobacter ethanolicus WP_003868938.1 |
1757
|
2559570
|
| 1977710 |
Thermoanaerobacter indiensis WP_019907184.1 |
|
|
| 1977712 |
Thermoanaerobacter italicus YP_003477429.1 |
108150
|
2559572
|
| 1977705 |
Thermoanaerobacter mathranii YP_003677325.1 |
57481
|
2559574
|
| 1977706 |
Thermoanaerobacter siderophilus WP_006569904.1 |
106578
|
2559575
|
| 1977714 |
Thermoanaerobacter thermohydrosulfuricus WP_004399990.1 |
1516
|
2559580
|
| 1977707 |
Thermoanaerobacter wiegelii YP_004818929.1 |
46354
|
2559581
|
| 1977708 |
Thermoanaerobacterium saccharolyticum YP_006391299.1 |
28896
|
2559586
|
| 1977711 |
Thermoanaerobacterium thermosaccharolyticum YP_003850791.1 |
1517
|
2559587
|
| 1977703 |
Thermoanaerobacterium thermosaccharolyticum YP_007297549.1 |
1517
|
2559587
|
| 1977709 |
Thermoanaerobacterium xylanolyticum YP_004469842.1 |
29329
|
2559589
|
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