@ARTICLE{TreeBASE2Ref23059,
author = {Alexey A Grum-Grzhimaylo and Marina L. Georgieva and Sofia A Bondarenko and Alfons JM Debets and Elena N. Bilanenko},
title = {On the diversity of fungi from soda soils},
year = {2015},
keywords = {alkaliphilic fungi, pH, soda soils, extremophile, Sodiomyces, Acrostalagmus, Chordomyces, Verticillium, Emericellopsis, Acremonium, Scopulariopsis, Alternaria, Thielavia, Plectosphaerellaceae, Pleosporaceae},
doi = {10.1007/s13225-015-0320-2},
url = {http://link.springer.com/article/10.1007%2Fs13225-015-0320-2},
pmid = {},
journal = {Fungal Diversity},
volume = {},
number = {},
pages = {},
abstract = {The diversity of filamentous fungi that can grow at high ambient pH values (i.e., 8-11) remains largely understudied. Here we study 100 alkalitolerant and alkaliphilic isolates from the soils around the basin of soda lakes in Asia and Africa to assess the major evolutionary lineages and morphologies pertinent to the alkaliphilic trait in filamentous fungi. The Emericellopsis lineage (Hypocreales, Hypocreomycetidae), along with Plectosphaerellaceae (Hypocreomycetidae), Pleosporaceae (Dothideomycetes), Chaetomiaceae (Sordariomycetidae) families appeared to be overrepresented with strong alkalitolerants and effective alkaliphiles. In particular, Sodiomyces species (Plectosphaerellaceae), Acrostalagmus luteoalbus (Plectosphaerellaceae), Emericellopsis alkalina (Hypocreales), Thielavia sp. (Chaetomiaceae), and Alternaria sect. Soda (Pleosporaceae) grew best at high ambient pH. The pH tolerance of Chordomyces antarcticum, Acrostalagmus luteoalbus and some other species was largely affected by the presence of extra Na+ in the growth medium. Moderate alkalitolerants included Scopulariopsis members (Microascales), Fusarium, Cladosporium, and many asexual acremonium-like species from Bionectriaceae. Weak alkalitolerants were represented by sporadic isolates of Penicillium, Purpureocillium lilacinum, and Alternaria alternata species, with the growth optimum at neutral or acidic pH. Weak alkalitolerants develop loose dry chains of spores easily dispersed by air. Their presence at low frequency with the growth optimum at neutral or acidic pH leads us to treat them as transient species in the alkaline soils, as those are also ubiquitous saprobes in normal soils. Our phylogenetic analyses show that the alkaliphilic trait in filamentous fungi has evolved several times. Several lineages harboring strong alkalitolerants derived from the known marine-borne fungi (Emericellopsis, Alternaria sect. Phragmosporae), or fall within the fungi associated with halophytic grasses (Pleosporaceae). Soda soils contain a diversity of fungi that range from weak alkalitolerant to alkaliphilic, which in few cases is associated with darkly pigmented mycelium and formation of microsclerotia. The alkaliphilic trait is spread throughout the Ascomycota, and usually juxtaposes with slime-covered polyphyletic acremonium-, verticillium-, gliocladium-types of asexual morphology, hyphae aggregating in chords, and enclosed fruit bodies.}
}
Taxa for matrix 21603 of Study 15631

Citation title:
"On the diversity of fungi from soda soils".

Study name:
"On the diversity of fungi from soda soils".

This study is part of submission 15631
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
1453904 |
Alternaria abundans CBS 534 83 |
|
|
1453857 |
Alternaria alternantherae CBS 124392 |
|
3188641
|
1453008 |
Alternaria alternata CBS 916 96 |
187775
|
5952497
|
1453887 |
Alternaria alternata G408 |
187775
|
5952497
|
1453913 |
Alternaria arborescens CBS 102605 |
156630
|
3295843
|
1453880 |
Alternaria argyranthemi CBS 116530 |
283352
|
3281702
|
1453907 |
Alternaria armoraciae CBS 118702 |
|
|
1453916 |
Alternaria bornmuelleri DAOM 231361 |
|
|
1453928 |
Alternaria botrytis CBS 197 67 |
|
|
1453858 |
Alternaria breviramosa CBS 121331 |
|
|
1453926 |
Alternaria caespitosa CBS 177 80 |
|
|
1453874 |
Alternaria caricis CBS 480 90 |
|
|
1453915 |
Alternaria cetera CBS 121340 |
283350
|
3262925
|
1453914 |
Alternaria chlamydospora CBS 491 72 |
|
3188644
|
1453890 |
Alternaria chlamydosporigena CBS 341 71 |
|
|
1453870 |
Alternaria conjuncta CBS 196 86 |
181017
|
3021257
|
1453882 |
Alternaria daucifolii CBS 118812 |
|
|
1453861 |
Alternaria dennisii CBS 476 90 |
|
3188645
|
1453906 |
Alternaria didymospora CBS 766 79 |
|
|
1453905 |
Alternaria embellisia CBS 339 71 |
|
|
1453917 |
Alternaria ethzedia CBS 197 86 |
181014
|
3021258
|
1453888 |
Alternaria gaisen CBS 632 93 |
167740
|
3146484
|
1453927 |
Alternaria infectoria CBS 210 86 |
45303
|
3021262
|
1453881 |
Alternaria kulundii M309 |
|
|
1453859 |
Alternaria kulundii M310 |
|
|
1453909 |
Alternaria kulundii M313 |
|
|
1453899 |
Alternaria limaciformis CBS 481 81 |
623146
|
3028717
|
1453919 |
Alternaria limoniasperae CBS 102595 |
232503
|
3295849
|
1453864 |
Alternaria longipes CBS 540 94 |
160389
|
3158209
|
1453885 |
Alternaria macrospora CBS 117228 |
119921
|
1447444
|
1453865 |
Alternaria molesta CBS 548 81 |
623147
|
3028718
|
1453877 |
Alternaria molesta M312 |
623147
|
3028718
|
1453879 |
Alternaria mouchaccae CBS 119671 |
283351
|
3028719
|
1453920 |
Alternaria obclavata CBS 124120 |
|
|
1453892 |
Alternaria oregonensis CBS 542 94 |
283353
|
3234298
|
1453902 |
Alternaria penicillata CBS 116607 |
|
|
1453871 |
Alternaria perpunctulata CBS 115267 |
|
|
1453872 |
Alternaria petuchovskii M304 2 |
|
|
1453878 |
Alternaria phragmospora CBS 274 70 |
|
3188660
|
1453898 |
Alternaria scirpicola CBS 481 90 |
|
3031413
|
1453889 |
Alternaria shukurtuzii M307 |
|
|
1453886 |
Alternaria slovaca CBS 567 66 |
|
|
1453883 |
Alternaria solani CBS 116651 |
48100
|
1447449
|
1453856 |
Alternaria soliaridae CBS 118387 |
|
|
1453912 |
Alternaria sp CBS 108 27 |
|
|
1453901 |
Alternaria sp CBS 174 52 |
|
|
1453869 |
Alternaria sp CBS 175 52 |
|
|
1453910 |
Alternaria sp M301 |
|
|
1453895 |
Alternaria tellustris CBS 538 83 |
|
|
1453876 |
Alternaria tenuissima CBS 918 96 |
132680
|
9730011
|
1453873 |
Chaetodiplodia sp CBS 453 68 |
|
|
1453855 |
Chaetosphaeronema hispidulum CBS 826 88 |
565418
|
3142222
|
1453897 |
Clathrospora elynae CBS 161 51 |
0
|
3059692
|
1453891 |
Clathrospora elynae CBS 196 54 |
0
|
3059692
|
1453894 |
Cochliobolus heterostrophus CBS 134 39 |
5016
|
3156497
|
1453908 |
Cochliobolus sativus DAOM 226212 |
74420
|
3168914
|
1453868 |
Comoclathris compressa CBS 156 53 |
|
3232866
|
1453867 |
Comoclathris compressa CBS 157 53 |
|
3232866
|
1453032 |
Paradendryphiella arenaria CBS 181 58 |
|
|
1453922 |
Paradendryphiella salina CBS 142 60 |
|
|
1453925 |
Peyronellaea zeae maydis CBS 588 69 |
|
|
1453923 |
Pleospora betae CBS 109410 |
137527
|
1452648
|
1453921 |
Pleospora betae CBS 523 66 |
137527
|
1452648
|
1453929 |
Pleospora calvescens CBS 246 79 |
|
3917988
|
1453860 |
Pleospora chenopodii CBS 206 80 |
|
|
1453875 |
Pleospora fallens CBS 161 78 |
|
|
1453893 |
Pleospora halimiones CBS 432 77 |
|
|
1452995 |
Pleospora herbarum CBS 191 86 |
33177
|
3872269
|
1453903 |
Pleospora incompta CBS 467 76 |
|
|
1453924 |
Pleospora typhicola CBS 132 69 |
|
3104032
|
1453862 |
Pleosporaceae sp M302 |
|
|
1453900 |
Pleosporaceae sp M303 |
|
|
1453911 |
Pleosporaceae sp M305 2 |
|
|
1453863 |
Pleosporaceae sp M306 |
|
|
1453918 |
Pleosporaceae sp M311 |
|
|
1453896 |
Pleosporaceae sp M315 |
|
|
1453884 |
Pyrenophora phaeocomes DAOM 222769 |
380602
|
3121328
|
1453866 |
Pyrenophora tritici repentis OSC 100066 |
|
|