@ARTICLE{TreeBASE2Ref24006,
author = {Jennifer Ann Jackson and Katrin T Linse and Rowan Whittle and Huw Griffiths},
title = {The evolutionary origins of the Southern Ocean philobryid bivalves: hidden biodiversity, ancient persistence},
year = {2015},
keywords = {bivalve, phylogeny, Southern Ocean, Philobryidae, secondary structure, divergence times, evolution},
doi = {},
url = {http://},
pmid = {},
journal = {PLoS One},
volume = {},
number = {},
pages = {},
abstract = {Philobryids (Bivalvia: Arcoida) are one of the most speciose marine bivalve families in the Southern Ocean and are common throughout the Southern Hemisphere. Considering this diversity and their brooding reproductive mode, (limiting long-distance dispersal), this family may have been present in the Southern Ocean since its inception. However Philobrya and Adacnarca appear only in the Quaternary fossil record of the Antarctic, suggesting a much more recent incursion. Molecular dating provides an independent means of measuring the time of origin and radiation of this poorly known group. Here we present the first combined molecular and morphological investigation of the Philobryidae in the Southern Ocean. Two nuclear loci (18S and 28S) were amplified from 35 Southern Ocean Adacnarca and Philobrya specimens, with a combined sequence length of 2,282 base pairs (bp). Adacnarca specimens (A. nitens and A. limopsoides) were resolved as a strongly supported monophyletic group. Genus Philobrya fell into two strongly supported groups (?sublaevis? and ?magellanica/wandelensis?), paraphyletic with Adacnarca. The A. nitens species complex is identified as at least seven morpho-species through morphological and genetic analysis of taxon clustering. Phylogenetic analyses resolve Philobryidae as a strongly supported monophyletic clade and sister taxon to the Limopsidae, as anticipated by their classification into the superfamily Limopsoidea. Bayesian relaxed clock analyses of divergence times suggest that genus Adacnarca radiated in the Southern Ocean from the Early Paleogene, while P. sublaevis and P. wandelensis clades radiated in the late Miocene, following the formation of the Antarctic Circumpolar Current. }
}
Taxa for tree 80179 of Study 16834

Citation title:
"The evolutionary origins of the Southern Ocean philobryid bivalves: hidden biodiversity, ancient persistence".

Study name:
"The evolutionary origins of the Southern Ocean philobryid bivalves: hidden biodiversity, ancient persistence".

This study is part of submission 16834
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
1683034 |
Acar plicata AJ389630 |
102288
|
5959682
|
1682976 |
Adacnarca limopsoides 03_633 |
|
|
1682973 |
Adacnarca nitens 01_40_1 |
|
5525305
|
1682968 |
Adacnarca nitens 02_329 |
|
5525305
|
1682981 |
Adacnarca nitens 02_693 |
|
5525305
|
1682978 |
Adacnarca nitens 02_809 |
|
5525305
|
1683021 |
Adacnarca nitens 02_924_1_2_3 |
|
5525305
|
1683013 |
Adacnarca nitens 03_125 |
|
5525305
|
1683024 |
Adacnarca nitens 03_415 |
|
5525305
|
1682983 |
Adacnarca nitens 03_560 |
|
5525305
|
1682969 |
Adacnarca nitens 03_767 |
|
5525305
|
1682965 |
Adacnarca nitens 03_798 |
|
5525305
|
1682972 |
Adacnarca nitens 03_815 |
|
5525305
|
1683020 |
Adacnarca nitens 03_843 |
|
5525305
|
1683027 |
Arca imbricata AY654986 |
121025
|
2692057
|
1683026 |
Arca noae X90960 |
44597
|
5437046
|
1683032 |
Barbatia barbata AF207646 |
120367
|
5657103
|
1683033 |
Barbatia barbata KC429326 |
120367
|
5657103
|
1683031 |
Barbatia virescens EF613227 |
6559
|
5508059
|
1683036 |
Barbatia virescens X91974 |
6559
|
5508059
|
1683014 |
Glycymeris insubrica AF207647 |
120429
|
5470432
|
1683037 |
Glycymeris sp X91978 |
52936
|
2692098
|
1683029 |
Limaria hians AF120534 |
120439
|
2694237
|
1682824 |
Limopsis enderbyensis |
182169
|
5967749
|
1682971 |
Limopsis marionensis |
182170
|
5794947
|
1682964 |
Lissarca miliaris 02_834 |
437015
|
6198129
|
1683023 |
Pecten maximus PCTRRE |
6579
|
2692296
|
1683018 |
Philobrya capillata 02_728 |
|
|
1682804 |
Philobrya crispa 02_498 |
|
5601088
|
1683016 |
Philobrya magellanica 01_81 |
|
|
1683017 |
Philobrya magellanica 01_812 |
|
|
1683019 |
Philobrya magellanica 02_558 |
|
|
1682975 |
Philobrya magellanica 02_600 |
|
|
1682982 |
Philobrya sublaevis 01_43 |
|
6304073
|
1682970 |
Philobrya sublaevis 01_61 |
|
6304073
|
1682962 |
Philobrya sublaevis 02_659 |
|
6304073
|
1682980 |
Philobrya wandelensis 01_08_2 |
|
6304075
|
1682977 |
Philobrya wandelensis 01_41 |
|
6304075
|
1682984 |
Philobrya wandelensis 01_55 |
|
6304075
|
1683030 |
Pinctada margaritifera AJ389638 |
102329
|
2694535
|
1683025 |
Scapharca kagoshimensis AB602044 |
499954
|
|
1683015 |
Scapharca kagoshimensis AB602045 |
499954
|
|
1683012 |
Scapharca kagoshimensis AB602046 |
499954
|
|
1683022 |
Striarca lactea AF120531 |
120460
|
5961154
|
1683035 |
Tegillarca granosa EF613230 |
220873
|
5441298
|
1683028 |
Tegillarca nodifera EF613229 |
220874
|
5972374
|