@ARTICLE{TreeBASE2Ref18154,
author = {Brenda D Wingfield and Lars Ericson and Timothy M. Szaro and Jeremy J. Burdon},
title = {Phylogenetic patterns in the Uredinales.},
year = {2004},
keywords = {},
doi = {10.1071/AP04020},
url = {},
pmid = {},
journal = {Australasian Plant Pathology},
volume = {33},
number = {3},
pages = {327--335},
abstract = {Rusts (Basidiomycetes: Uredinales) are a large, diverse group of obligate biotrophic fungi that include many important plant pathogens. Phylogenetic relationships within the group are poorly understood, with between two and fourteen families being recognized on morphological and host taxonomic grounds. We report the first analysis of broad-scale relationships within the Uredinales using DNA sequence data from the small subunit gene of the ribosomal RNA operon. A major split is obvious between genera that have aecial stages on gymnosperm hosts and those with this stage on angiosperms. This finding is in accord with the early taxonomic two-family treatments of the Uredinales. Within the major clades there is evidence of incongruency with morphologically defined families. Racospermyces Maravalia, Hemileia and Caeoma are basal to the major phylogenetic sub-division and probably represent the most ancient rust lineages. Using these sequence data we estimate that the rusts diverged from their closest relatives around 150 million years ago.}
}
Taxa for tree 91731 of Study 1168

Citation title:
"Phylogenetic patterns in the Uredinales.".

This study was previously identified under the legacy study ID S1075
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
2054019 |
Cortinarius iodes AF389133 |
68760
|
3119909
|
2054421 |
Hydnangium carneum TL2359 |
604282
|
3121043
|
2054371 |
Hydnangium carneum TL2361 |
604282
|
3121043
|
2054419 |
Hydnangium sp KHNZ06123 FJ168595 |
|
|
2054374 |
Laccaria amethystina AM113953 |
89243
|
3277621
|
2054386 |
Laccaria amethystina EF530940 |
89243
|
3277621
|
2054415 |
Laccaria amethystina EU819476 |
89243
|
3277621
|
2054379 |
Laccaria bicolor EU597085 |
29883
|
3210602
|
2054396 |
Laccaria canaliculata TM1811 |
|
|
2054382 |
Laccaria cf laccata src671 DQ974699 |
|
|
2054408 |
Laccaria laccata AB211273 |
36061
|
3034669
|
2054380 |
Laccaria laccata AJ699074 |
36061
|
3034669
|
2054392 |
Laccaria laccata EF644110 |
36061
|
3034669
|
2054395 |
Laccaria laccata var pallidifolia EU819478 |
|
|
2054403 |
Laccaria lateritia ES093 |
604283
|
3210606
|
2054411 |
Laccaria lateritia ES101Y |
604283
|
3210606
|
2054372 |
Laccaria masoniae1 ES285 |
|
|
2054400 |
Laccaria masoniae2 ES279 |
|
|
2054420 |
Laccaria montana DQ149865 |
344590
|
3195559
|
2054381 |
Laccaria montana EU486434 |
344590
|
3195559
|
2054393 |
Laccaria murina AB211271 |
323990
|
3159596
|
2054418 |
Laccaria nobilis DQ149861 |
344588
|
3023941
|
2054370 |
Laccaria ochropurpurea FJ168600 |
181910
|
3951677
|
2054398 |
Laccaria proxima GQ267477 |
47297
|
3280110
|
2054401 |
Laccaria pseudomontana DQ149871 |
344594
|
10285016
|
2054378 |
Laccaria pumila DQ149864 |
137754
|
3143445
|
2054413 |
Laccaria sp ES154 |
|
|
2054410 |
Laccaria sp ES172 |
|
|
2054416 |
Laccaria sp ES187 |
|
|
2054417 |
Laccaria sp GMM1080 FJ168603 |
|
|
2054406 |
Laccaria sp JCS071005C FJ168602 |
|
|
2054424 |
Laccaria sp SK05030 FJ168598 |
|
|
2054409 |
Laccaria spA ES295 |
|
|
2054412 |
Laccaria spB1 TM999 |
|
|
2054388 |
Laccaria spB2 KS1494 |
|
|
2054375 |
Laccaria spB2 TM956 |
|
|
2054397 |
Laccaria spB3 TM944 |
|
|
2054377 |
Laccaria spD ES189 |
|
|
2054414 |
Laccaria spE ES277 |
|
|
2054422 |
Laccaria vinaceoavellanea AB459516 |
554046
|
3195560
|
2054373 |
Mythicomyces corneipes DQ404393 |
181947
|
3020987
|
2054385 |
Podohydnangium australe KM162959 GQ981532 |
|
|
2054376 |
Podohydnangium australe TM1026 |
|
|
2054389 |
uncultured Laccaria FN393140 |
427885
|
10337501
|
2054405 |
uncultured Laccaria GQ240912 |
427885
|
10337501
|
2054383 |
uncultured Laccaria GQ240913 |
427885
|
10337501
|
2054423 |
uncultured ectomycorrhiza Laccaria AM161523 |
|
|
2054394 |
uncultured ectomycorrhiza Laccaria AY880933 |
|
|
2054402 |
uncultured ectomycorrhiza Laccaria EF218783 |
|
|
2054399 |
uncultured ectomycorrhiza Laccaria NZ EF634114 |
|
|
2054384 |
uncultured ectomycorrhiza Laccaria REVERSED AY825516 |
|
|
2054390 |
uncultured fungus GQ205354 |
175245
|
10199154
|
2054407 |
uncultured fungus GQ205355 |
175245
|
10199154
|
2054404 |
uncultured fungus from ectomycorrhizal root AY702728 |
|
|
2054391 |
uncultured mycorrhizal basidiomycete AB211143 |
|
|
2054387 |
uncultured soil fungus DQ421089 |
|
|