@ARTICLE{TreeBASE2Ref15226,
author = {Elsie Magrietha de Meyer and Z. W. d. Beer and Richard C. Summerbell and Ahmad Mohammad Moharram and G. S. d. Hoog and Hester F. Vismer and Michael J Wingfield},
title = {Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras - Sporothrix schenckii complex},
year = {2008},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Mycologia},
volume = {},
number = {},
pages = {},
abstract = {Sporothrix, one of the anamorph genera of Ophiostoma, includes the important human pathogen S. schenckii and various fungi associated with insects and sapstain of wood. A survey of fungi from wooden utility poles in South Africa yielded two distinct groups of Sporothrix isolates from different geographical areas. DNA sequence and morphological data derived in this study showed that isolates in these groups represent two novel species in the S. schenckii O. stenoceras species complex. A new species isolated from pine poles and rosebush wood and phylogenetically closely related to S. pallida, is described here as Sporothrix stylites. Phylogenetic analysis also confirmed the synonymy of S. albicans and S. nivea with S. pallida. Sporothrix stylites and S. pallida are also closely related to the isolates from soil, previously treated as environmental isolates of S. schenckii. Soil isolates are clearly distinct from human isolates of S. schenckii. We describe the former here as Sporothrix humicola. The isolates from eucalypt poles group peripheral to most other species in the S. schenckii - O. stenoceras complex, and are newly described as Sporothrix lignivora. Phylogenetic analysis of sequences of isolates from soil and wood together with those of clinical isolates showed that the human-pathogenic strains form an aggregate of several cryptic species.}
}
Taxa for tree 27650 of Study 2018

Citation title:
"Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras - Sporothrix schenckii complex".

This study was previously identified under the legacy study ID S2010
(Status: Published).
Taxa
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| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 470567 |
Actinoposthia beklemischevi |
84061
|
5015909
|
| 470605 |
Actinoposthia haplovata |
|
5015915
|
| 470618 |
Amphiscolops bermudensis |
|
5016014
|
| 470541 |
Amphiscolops sp |
|
|
| 470600 |
Amphiscolops sp Hendelberg |
|
|
| 470610 |
Anaperus biaculeatus |
84067
|
5015871
|
| 470607 |
Anaperus gardineri |
188020
|
5015873
|
| 470554 |
Anaperus rubellus |
|
5015875
|
| 470611 |
Anaperus singularis |
|
5473604
|
| 470534 |
Anaperus tvaerminnensis |
90924
|
5015879
|
| 470659 |
Aphanostoma bruscai |
188024
|
5016038
|
| 470561 |
Aphanostoma collinae |
|
|
| 470558 |
Aphanostoma sp |
|
|
| 470543 |
Aphanostoma virescens |
|
5016047
|
| 470632 |
Archaphanostoma macrospiriferum |
|
5016053
|
| 470608 |
Ascoparia sp |
|
|
| 470551 |
Atriofronta polyvacuola |
|
5015921
|
| 470614 |
Avagina marci |
|
5016059
|
| 470547 |
Avagina n.sp. |
|
|
| 470631 |
Childia brachyposthium |
243777
|
5436776
|
| 470563 |
Childia crassum |
296776
|
5436778
|
| 470570 |
Childia cycloposthium |
172106
|
5436780
|
| 470628 |
Childia groenlandica |
84071
|
492584
|
| 470620 |
Childia macroposthium |
243776
|
5436790
|
| 470661 |
Childia nsp 1 |
|
|
| 470654 |
Childia nsp 2 |
|
|
| 470576 |
Childia sp |
|
|
| 470657 |
Childia submaculatum |
243778
|
5436792
|
| 470617 |
Childia trianguliferum |
662540
|
5436794
|
| 470636 |
Childia vivipara |
|
|
| 470664 |
Convoluta cf bohmigi |
|
5016077
|
| 470595 |
Convoluta convoluta |
84062
|
5016085
|
| 470639 |
Convolutriloba hastifera |
536235
|
5016709
|
| 470594 |
Convolutriloba longifissura |
536236
|
5016711
|
| 470623 |
Convolutriloba macropyga |
536237
|
|
| 470539 |
Convolutriloba retrogemma |
536238
|
5016713
|
| 470627 |
Daku woorimensis |
|
5539179
|
| 470571 |
Diopisthoporus longitubus |
|
492573
|
| 470537 |
Diopisthoporus nsp |
|
|
| 470667 |
Diopisthoporus psammophilus |
|
5016259
|
| 470606 |
Endocincta nsp |
|
|
| 470662 |
Endocincta punctata |
|
5016735
|
| 470673 |
Eumecynostomum altitudi |
243782
|
5016579
|
| 470544 |
Faerlea glomerata |
|
5016154
|
| 470581 |
Hallangia proporoides |
|
5016265
|
| 470658 |
Haplocelis dichona |
|
5016649
|
| 470626 |
Haplogonaria schillingi |
|
|
| 470643 |
Haplogonaria syltensis |
90920
|
5016522
|
| 470588 |
Haplogonaria viridis |
|
5016524
|
| 470559 |
Haploposthia lactomaculata |
|
5468132
|
| 470615 |
Haploposthia rubra |
|
5016496
|
| 470540 |
Haploposthia sp |
|
|
| 470633 |
Haploposthia vandula |
|
5016494
|
| 470647 |
Heterochaerus blumi |
|
|
| 470637 |
Hofstenia miamia |
442651
|
2680128
|
| 470552 |
Hofsteniola pardii |
|
5016569
|
| 470577 |
Isodiametra bajaensis |
|
|
| 470560 |
Isodiametra cuernos |
|
|
| 470624 |
Isodiametra divae |
|
|
| 470625 |
Isodiametra hortulus |
|
|
| 470674 |
Isodiametra nicki |
|
|
| 470619 |
Isodiametra norvegica |
|
|
| 470573 |
Isodiametra pulchra |
504439
|
|
| 470572 |
Isodiametra vexillaria |
|
|
| 470587 |
Kuma albiventer |
|
5016526
|
| 470644 |
Kuma viridis |
|
5016534
|
| 470645 |
Meara stichopi |
84115
|
5016765
|
| 470589 |
Mecynostomum auritum |
296779
|
5016605
|
| 470666 |
Mecynostomum sp |
|
|
| 470550 |
Myopea callaeum |
|
|
| 470630 |
Myopea sp |
|
|
| 470672 |
Nemertoderma sp |
|
|
| 470660 |
Neochildia fusca |
66402
|
5593417
|
| 470542 |
Notocelis gullmarensis |
|
5016653
|
| 470596 |
Oligofilomorpha interstitiophilum |
442653
|
7200680
|
| 470653 |
Otocelis erinae |
|
|
| 470579 |
Otocelis sandara |
188044
|
5016665
|
| 470564 |
Paedomecynostomum bruneum |
90912
|
5016615
|
| 470649 |
Paramecynostomum diversicolor |
243784
|
5016619
|
| 470641 |
Paramecynostomum sp |
|
|
| 470556 |
Paratomella rubra |
90914
|
5016684
|
| 470548 |
Paratomella unichaeta |
188050
|
5016686
|
| 470668 |
Pelophila lutheri |
188023
|
5015961
|
| 470601 |
Philactinoposthia coneyi |
|
|
| 470675 |
Philactinoposthia n.sp. |
|
|
| 470585 |
Philactinoposthia nsp 2 |
|
|
| 470621 |
Philactinoposthia saliens |
84155
|
5015975
|
| 470638 |
Philactinoposthia sp |
|
|
| 470535 |
Philactinoposthia sp 2 |
|
|
| 470652 |
Philactinoposthia sp 3 |
|
|
| 470651 |
Philactinoposthia sp 4 |
|
|
| 470629 |
Philocelis brueggemanni |
188046
|
5016669
|
| 470586 |
Philocelis karlingi |
296777
|
5016673
|
| 470569 |
Philocelis robrochai |
|
|
| 470609 |
Philomecynostomum lapillum |
66286
|
5016621
|
| 470650 |
Philomecynostomum sp |
|
|
| 470598 |
Polycanthus sp |
|
|
| 470562 |
Polycanthus sp 2 |
|
|
| 470634 |
Polycanthus torosus |
|
5539183
|
| 470592 |
Postmecynostomum pictum |
90926
|
5016625
|
| 470646 |
Praeconvoluta bocasensis |
|
|
| 470671 |
Praeconvoluta castinea |
|
5016196
|
| 470533 |
Praeconvoluta tigrina |
188030
|
5016206
|
| 470597 |
Praeconvoluta tornuva |
188031
|
5016208
|
| 470584 |
Praesagittifera naikaiensis |
|
5016717
|
| 470663 |
Proaphanostoma tenuissima |
|
7200616
|
| 470549 |
Proporus bermudensis |
|
5016688
|
| 470545 |
Proporus brochii |
|
5016690
|
| 470578 |
Proporus carolinensis |
442656
|
5473610
|
| 470648 |
Proporus sp |
|
|
| 470536 |
Proporus sp 2 |
|
|
| 470590 |
Pseudactinoposthia sanguineum |
|
|
| 470655 |
Pseudaphanostoma herringi |
|
|
| 470546 |
Pseudaphanostoma smithrii |
188033
|
5016244
|
| 470557 |
Pseudmecynostomum bruneophilum |
|
7200659
|
| 470642 |
Pseudmecynostomum phoca |
188041
|
5016635
|
| 470670 |
Pseudohaplogonaria rodmani |
|
|
| 470613 |
Pseudohaplogonaria sp |
|
|
| 470604 |
Raphidophallus actuosus |
|
492580
|
| 470565 |
Simplicomorpha gigantorhabditis |
90918
|
5016558
|
| 470622 |
Solenofilomorpha crezeei |
|
|
| 470553 |
Solenofilomorpha n.sp. 2 |
|
|
| 470580 |
Solenofilomorpha nsp |
|
|
| 470665 |
Stromatricha hochbergi |
|
5539178
|
| 470602 |
Symsagittifera corsicae |
170512
|
5600354
|
| 470568 |
Symsagittifera psammophila |
90916
|
5016729
|
| 470599 |
Symsagittifera roscoffensis |
84072
|
5466265
|
| 470583 |
Waminoa brickneri |
|
|
| 470656 |
Waminoa sp |
|
|