@ARTICLE{TreeBASE2Ref15226,
author = {Elsie Magrietha de Meyer and Z. W. d. Beer and Richard C. Summerbell and Ahmad Mohammad Moharram and G. S. d. Hoog and Hester F. Vismer and Michael J Wingfield},
title = {Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras - Sporothrix schenckii complex},
year = {2008},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Mycologia},
volume = {},
number = {},
pages = {},
abstract = {Sporothrix, one of the anamorph genera of Ophiostoma, includes the important human pathogen S. schenckii and various fungi associated with insects and sapstain of wood. A survey of fungi from wooden utility poles in South Africa yielded two distinct groups of Sporothrix isolates from different geographical areas. DNA sequence and morphological data derived in this study showed that isolates in these groups represent two novel species in the S. schenckii O. stenoceras species complex. A new species isolated from pine poles and rosebush wood and phylogenetically closely related to S. pallida, is described here as Sporothrix stylites. Phylogenetic analysis also confirmed the synonymy of S. albicans and S. nivea with S. pallida. Sporothrix stylites and S. pallida are also closely related to the isolates from soil, previously treated as environmental isolates of S. schenckii. Soil isolates are clearly distinct from human isolates of S. schenckii. We describe the former here as Sporothrix humicola. The isolates from eucalypt poles group peripheral to most other species in the S. schenckii - O. stenoceras complex, and are newly described as Sporothrix lignivora. Phylogenetic analysis of sequences of isolates from soil and wood together with those of clinical isolates showed that the human-pathogenic strains form an aggregate of several cryptic species.}
}
Taxa for tree 54947 of Study 2018

Citation title:
"Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras - Sporothrix schenckii complex".

This study was previously identified under the legacy study ID S2010
(Status: Published).
Taxa
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| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 838884 |
Eimeria acervulina |
5801
|
5454741
|
| 838883 |
Eimeria burdai |
|
5716878
|
| 838896 |
Eimeria cahirinensis NFS |
|
6136837
|
| 838926 |
Eimeria cahirinensis WR |
|
6136837
|
| 838977 |
Eimeria callospermophili |
|
6130192
|
| 838966 |
Eimeria caviae |
|
6180057
|
| 838909 |
Eimeria cf. mivati |
578108
|
|
| 838985 |
Eimeria coecicola |
471281
|
5660140
|
| 838939 |
Eimeria exigua |
484791
|
5628157
|
| 838944 |
Eimeria flavescens |
471277
|
5517303
|
| 838958 |
Eimeria intestinalis |
471278
|
6078389
|
| 838900 |
Eimeria irresidua |
484792
|
7028885
|
| 838880 |
Eimeria magna |
471282
|
5529479
|
| 838992 |
Eimeria maxima |
5804
|
5447757
|
| 838920 |
Eimeria mivati |
54117
|
5954914
|
| 838933 |
Eimeria myoxi |
|
989472
|
| 838931 |
Eimeria necatrix |
51315
|
5507687
|
| 838945 |
Eimeria piriformis |
471280
|
|
| 838962 |
Eimeria ranae |
556924
|
6852587
|
| 838918 |
Eimeria sp. ex. Apodemus agrarius 21617 |
|
|
| 838973 |
Eimeria sp. ex. Apodemus agrarius 21668 |
|
|
| 839019 |
Eimeria sp. ex. Apodemus flavicollis 1 |
|
|
| 839011 |
Eimeria sp. ex. Apodemus flavicollis 12 |
|
|
| 839020 |
Eimeria sp. ex. Apodemus flavicollis 4 |
|
|
| 838904 |
Eimeria sp. ex. Apodemus sylvaticus 0850 |
|
|
| 838875 |
Eimeria sp. ex. Apodemus sylvaticus 0853 |
|
|
| 839010 |
Eimeria sp. ex. Phataginus tricuspis 1 |
|
|
| 839018 |
Eimeria sp. ex. Phataginus tricuspis 2 |
|
|
| 839013 |
Eimeria sp. ex. Sorex araneus 136 |
|
|
| 838982 |
Eimeria tenella |
5802
|
5434519
|
| 838932 |
Eimeria vejdovskyi |
471284
|
5753399
|
| 839016 |
Isospora hypoleucae |
632697
|
|
| 839014 |
Isospora sp. ex. Apodemus flavicollis B13 |
|
|
| 839015 |
Isospora sp. ex. Sylvia atricapilla iSAT1 |
|
|
| 839021 |
Isospora sp. ex. Sylvia atricapilla iSAT2 |
|
|
| 839022 |
Isospora sp. ex. Sylvia atricapilla iSAT3 |
|
|
| 839012 |
Isospora sp. ex. Sylvia atricapilla iSAT4 |
|
|
| 839017 |
Isospora sp. ex. Sylvia atricapilla iSAT5 |
|
|
| 838898 |
Isospora sp. ex. Talpa europaea 106 |
|
|
| 839023 |
Isospora sp. ex. Talpa europaea 218 |
|
|