@ARTICLE{TreeBASE2Ref16844,
author = {H. D. T. Nguyen and Keith A Seifert},
title = {Description and DNA barcoding of three new species of Leohumicola from South Africa and the United States},
year = {2008},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Persoonia},
volume = {21},
number = {},
pages = {57--69},
abstract = {Three new species of Leohumicola (anamorphic Leotiomycetes) are described using morphological characters and phylogenetic analyses of DNA barcodes. Leohumicola levissima and L. atra were isolated from soils collected after forest fires in Crater Lake National Park (USA). Leohumicola incrustata was isolated from burned fynbos from the Cape of Good Hope Nature Reserve, South Africa. The three species exhibit characteristic Leohumicola morphology but are morphologically distinct based on conidial characters. Two DNA barcode regions, the Internal Transcribed Spacer (ITS) nuclear rDNA region and the cytochrome oxidase subunit I (Cox1) mitochondrial gene, were sequenced. Single gene parsimony, dual-gene parsimony and dual-gene Bayesian inference phylogenetic analyses support L. levissima, L. atra, L. incrustata as distinct phylogenetic species. Both ITS and Cox1 barcodes are effective for the molecular identification of Leohumicola species.}
}
Taxa for tree 133121 of Study 2130

Citation title:
"Description and DNA barcoding of three new species of Leohumicola from South Africa and the United States".

This study was previously identified under the legacy study ID S2134
(Status: Published).
Taxa
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| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 4626763 |
Ambarignomonia petiolorum AY818963.1 |
|
|
| 4626656 |
Candida broadrunensis KY106372.1 |
|
|
| 4626777 |
Colletotrichum boninense DQ286171.1 |
200359
|
3958583
|
| 4626771 |
Colletotrichum cliviicola MH874998.1 |
|
|
| 4626780 |
Colletotrichum feijoicola MK876420.1 |
|
|
| 4626753 |
Colletotrichum hippeastri MH874999.1 |
|
690257
|
| 4626790 |
Colletotrichum karstii MH877253.1 |
|
|
| 4626769 |
Colletotrichum novae-zelandiae MH877051.1 |
|
|
| 4626744 |
Colletotrichum oncidii MH877053.1 |
|
|
| 4626765 |
Colletotrichum petchii MH875299.1 |
|
|
| 4626745 |
Colletotrichum torulosum MH876451.1 |
|
|
| 4626776 |
Coniella africana AY339293.1 |
|
|
| 4626742 |
Coniella diospyri MK047490.1 |
|
|
| 4626784 |
Coniella limoniformis NG_058964.1 |
|
|
| 4626785 |
Coniella nicotianae MH878278.1 |
|
|
| 4626786 |
Coniella pseudodiospyri CPC 35609 |
|
|
| 4626757 |
Coniella pseudodiospyri CPC 35725 |
|
|
| 4626743 |
Coniella straminea AY339296.1 |
|
|
| 4626760 |
Coniella tibouchinae JQ281777.2 |
|
|
| 4626754 |
Cryptodiaporthe aubertii KX929803.1 |
|
|
| 4626756 |
Cytospora lumnitzericola MH253453.1 |
|
|
| 4626782 |
Cytospora nitschkei MH874559.1 |
|
|
| 4626750 |
Cytospora pavettae CPC 35293 |
|
|
| 4626759 |
Cytospora thailandica MH253456.1 |
|
|
| 4626793 |
Cytospora xylocarpi MH253454.1 |
|
|
| 4626766 |
Diaporthe actinidiae KX609783.1 |
|
|
| 4626758 |
Diaporthe angelicae NG_059068.1 |
230357
|
4027778
|
| 4626787 |
Diaporthe arctii AF362562.1 |
172192
|
1212666
|
| 4626772 |
Diaporthe eres AF408350.1 |
83184
|
1197496
|
| 4626748 |
Diaporthe fructicola MAFF246408 |
|
|
| 4626783 |
Diaporthe fructicola MAFF246409 |
|
|
| 4626755 |
Diaporthe maritima KU552030.1 |
|
|
| 4626788 |
Diaporthe oncostoma AF408353.1 |
187230
|
1186927
|
| 4626781 |
Diaporthe oncostoma MF373352.1 |
187230
|
1186927
|
| 4626775 |
Diaporthe padi AF408354.1 |
187231
|
1179869
|
| 4626751 |
Diaporthe perjuncta NG_059064.1 |
186170
|
1191715
|
| 4626792 |
Diaporthe phaseolorum AY346279.1 |
36923
|
1191198
|
| 4626764 |
Diaporthe pustulata AF408357.1 |
187233
|
1185467
|
| 4626789 |
Gnomoniopsis chamaemori EU255107.1 |
495085
|
3110681
|
| 4626791 |
Gnomoniopsis rosae MK047501.1 |
|
|
| 4626752 |
Gnomoniopsis smithogilvyi MH877030.1 |
|
|
| 4626762 |
Neognomoniopsis quercina CPC 35562 |
|
|
| 4626773 |
Phaeocytostroma plurivorum JX681106.1 |
|
3032513
|
| 4626746 |
Plagiostoma aesculi EU255164.1 |
|
|
| 4626774 |
Plagiostoma amygdalinae EU255165.1 |
|
|
| 4626747 |
Plagiostoma apiculatum EU255166.1 |
|
|
| 4626741 |
Plagiostoma devexum EU255171.1 |
494054
|
3035705
|
| 4626749 |
Plagiostoma euphorbiae AF408382.1 |
148338
|
1228171
|
| 4626779 |
Plagiostoma fraxini AF362552.1 |
|
|
| 4626767 |
Plagiostoma inclinatum EU255183.1 |
494055
|
3199359
|
| 4626770 |
Plagiostoma pseudobavaricum EU255186.1 |
494056
|
3025263
|
| 4626778 |
Plagiostoma rhododendri EU255187.1 |
|
|
| 4626768 |
Plagiostoma salicellum AF408345.1 |
|
|
| 4626761 |
Sirococcus castaneae KX929769.1 |
|
|