@ARTICLE{TreeBASE2Ref29401,
author = {Juan Carlos Zamora and Stefan Ekman},
title = {Phylogeny and character evolution in the Dacrymycetes, and systematics of Unilacrymaceae and Dacryonaemataceae fam. nov.},
year = {2020},
keywords = {Carotenoids, coalescence analyses, cytology, Dacrymycetes, Dacryonaema, species delimitations, Unilacryma},
doi = {10.3767/persoonia.2020.44.07},
url = {http://},
pmid = {33116340},
journal = {Persoonia},
volume = {44},
number = {},
pages = {161--205},
abstract = {We present a multilocus phylogeny of the class Dacrymycetes, based on data from the 18S, ITS, 28S, RPB1, RPB2, TEF-1α, 12S, and ATP6 DNA regions, with c. 90 species including the types of most currently accepted genera. A variety of methodological approaches was used to infer phylogenetic relationships among the Dacrymycetes, from a supermatrix strategy using maximum likelihood and Bayesian inference on a concatenated dataset, to coalescence-based calculations, such as quartet-based summary methods of independent single-locus trees, and Bayesian integration of single-locus trees into a species tree under the multispecies coalescent. We evaluate for the first time the taxonomic usefulness of some cytological phenotypic characters, i.e., vacuolar contents (vacuolar bodies and lipid bodies), number of nuclei of recently discharged basidiospores, and pigments, with especial emphasis on carotenoids. These characters, along with several others traditionally used for the taxonomy of this group (basidium shape, presence and morphology of clamp connections, morphology of the terminal cells of cortical/marginal hyphae, presence and degree of ramification of the hyphidia), are mapped on the resulting phylogenies and their evolution through the class Dacrymycetes discussed. Our analyses reveal five lineages that putatively represent five different families, four of which are accepted and named. Three out of these four lineages correspond to previously circumscribed and published families (Cerinomycetaceae, Dacrymycetaceae, and Unilacrymaceae), and one is proposed as the new family Dacryonaemataceae. Provisionally, only a single order, Dacrymycetales, is accepted within the class. Furthermore, the systematics of the two smallest families, Dacryonaemataceae and Unilacrymaceae, are investigated to the species level, using coalescence-based species delimitation on multilocus DNA data, and a detailed morphological study including morphometric analyses of the basidiospores. Three species are accepted in Dacryonaema, the type, Da. rufum, the newly combined Da. macnabbii (basionym Dacrymyces macnabbii), and a new species named Da. macrosporum. Two species are accepted in Unilacryma, the new U. bispora, and the type, U. unispora, the latter treated in a broad sense pending improved sampling across the Holarctic.}
}
Taxa for tree 129116 of Study 24147

Citation title:
"Phylogeny and character evolution in the Dacrymycetes, and systematics of Unilacrymaceae and Dacryonaemataceae fam. nov.".

Study name:
"Phylogeny and character evolution in the Dacrymycetes, and systematics of Unilacrymaceae and Dacryonaemataceae fam. nov.".

This study is part of submission 24147
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
4379996 |
Dacrymyces macnabbii DACTOR15_tmacnabbii15 |
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4379977 |
Dacrymyces macnabbii DACTOR5_tmacnabbii5 |
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4379959 |
Dacrymyces macnabbii DACTOR8_tmacnabbii8 |
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4379991 |
Dacrymyces macnabbii DACTOR9_tmacnabbii9 |
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4379992 |
Dacrymyces macnabbii DAOMAC10_macnabbii10 |
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4379993 |
Dacrymyces macnabbii DAOMAC13_macnabbii13 |
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4379964 |
Dacrymyces macnabbii DAOMAC14_macnabbii14 |
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4380006 |
Dacrymyces macnabbii DAOMAC4_macnabbii4 |
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4379990 |
Dacrymyces macnabbii DAOMAC5_macnabbii5 |
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4379969 |
Dacrymyces macnabbii DAOMAC6_macnabbii6 |
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4379987 |
Dacrymyces macnabbii DAOMAC8_macnabbii8 |
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4379970 |
Dacrymyces macnabbii DAOMAC9_macnabbii9 |
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4379989 |
Dacrymyces macrosporum DAOMAC11_macrosporum11 |
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4379979 |
Dacrymyces macrosporum DAOMAC15_macrosporum15 |
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4379997 |
Dacrymyces macrosporum DAOMAC16_macrosporum16 |
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4379995 |
Dacrymyces macrosporum DAOMAC17_macrosporum17 |
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4379988 |
Dacrymyces macrosporum DAOMAC2_macrosporum2 |
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4379972 |
Dacrymyces macrosporum DAOMAC7_macrosporum7 |
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4379978 |
Dacryonaema rufum DAORUF1_rufum1 |
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4379974 |
Dacryonaema rufum DAORUF2_rufum2 |
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4379998 |
Dacryonaema rufum DAORUF3_rufum3 |
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4379962 |
Dacryonaema rufum DAORUF4_rufum4 |
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4380004 |
Dacryonaema rufum DAORUF5_rufum5 |
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4379983 |
Dacryonaema rufum DAORUF6_rufum6 |
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4379975 |
Dacryonaema rufum DAORUF7_rufum7 |
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4380002 |
Dacryonaema rufum DAORUF8_rufum8 |
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4380008 |
Unilacryma bispora DACOVI1_bisporaa |
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4379961 |
Unilacryma bispora DACOVI2_bisporab |
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4379985 |
Unilacryma bispora KM494136_bisporaENAS |
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4379994 |
Unilacryma bispora UNIBIS1_bispora1 |
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4379965 |
Unilacryma bispora UNIBIS2_bispora2 |
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4379981 |
Unilacryma bispora UNIBIS3_bispora3 |
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4379971 |
Unilacryma bispora UNIBIS4_bispora4 |
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4380003 |
Unilacryma unispora 1305158_9_unisporac |
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4379973 |
Unilacryma unispora 13061410_8_unisporaj |
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4379984 |
Unilacryma unispora 13061411_6_unisporai |
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4380007 |
Unilacryma unispora 1306145_2_unisporaa |
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4380000 |
Unilacryma unispora 1307153_10_unisporae |
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4380001 |
Unilacryma unispora 1307158_5_unisporag |
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4379980 |
Unilacryma unispora 1310144_8_unisporab |
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4379968 |
Unilacryma unispora 1310149_4_unisporah |
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4379976 |
Unilacryma unispora 1311137_5_unisporad |
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4379982 |
Unilacryma unispora 1312125_3_unisporaf |
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4379986 |
Unilacryma unispora TUFC13832_332 |
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4379960 |
Unilacryma unispora TUFC13839b |
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4380005 |
Unilacryma unispora UNIUNI1_unispora1 |
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4379967 |
Unilacryma unispora UNIUNI2_unispora2 |
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4379966 |
Unilacryma unispora UNIUNI3_unispora3 |
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4379999 |
Unilacryma unispora UNIUNI4_unispora4 |
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4379963 |
Unilacryma unispora UNIUNI5_unispora5 |
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