@ARTICLE{TreeBASE2Ref19845,
author = {Hsiu-Chin Lin and Phil Hastings},
title = {Evolution of a Neotropical marine fish lineage (Subfamily Chaenopsinae, Suborder Blennioidei) based on phylogenetic analysis of combined molecular and morphological data.},
year = {2011},
keywords = {Chaenopsidae, Phylogeny, Rapid radiation, Habitat use, Trans-isthmian geminate, Convergent evolution, Mimicry},
doi = {10.1016/j.ympev.2011.04.018},
url = {http://},
pmid = {},
journal = {Molecular Phylogenetics and Evolution },
volume = {60},
number = {},
pages = {236--248},
abstract = {Phylogenetic relationships within tube blennies (Chaenopsinae) were reconstructed using Bayesian, maximum parsimony and likelihood analyses of multiple molecular markers (mitochondrial DNA: COI; nuclear DNA: TMO-4C4, RAG1, Rhodopsin, and Histone H3) and 148 morphological characters. This total evidence based topology is well-resolved and congruent across analytical methods with strong support for the monophyly of the Chaenopsinae, all included genera and several internal nodes. A rapid radiation in the early evolution of chaenopsins is inferred from the relatively poor support values for relationships among basal lineages and their divergence into different habitats (rocky reefs, coral reefs and the reef/ sand interface). Rates of molecular evolution in chaenopsins, as inferred by divergence among four putative transisthmian geminate species pairs, are rapid compared to other fishes. Conflicts among genetic markers and morphology are especially evident within the genus Coralliozetus, with different species relationships supported by morphology, TMO-4C4, and RAG1 plus Rhodopsin. This study hypothesizes a novel sistergroup relationship between Ekemblemaria and Hemiemblemaria, consistent with morphological, molecular and habitat use data. Our total evidence phylogenetic hypothesis indicates that previously hypothesized morphological characters supporting a close relationship between Hemiemblemaria and Chaenopsis plus Lucayablennius resulted from convergent evolution in these relatively free-swimming blennies.}
}
Taxa for tree 135687 of Study 10905

Citation title:
"Evolution of a Neotropical marine fish lineage (Subfamily Chaenopsinae, Suborder Blennioidei) based on phylogenetic analysis of combined molecular and morphological data.".

Study name:
"Evolution of a Neotropical marine fish lineage (Subfamily Chaenopsinae, Suborder Blennioidei) based on phylogenetic analysis of combined molecular and morphological data.".

This study is part of submission 10895
(Status: Published).
Taxa
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| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 4799132 |
Colletotrichum aenigma ICMP18608_14 |
|
|
| 4799092 |
Colletotrichum aeschynomenes ICMP17673_15 |
|
3223571
|
| 4799135 |
Colletotrichum alatae ICMP17919_16 |
|
1215735
|
| 4799114 |
Colletotrichum alienum ICMP12071_17 |
|
|
| 4799096 |
Colletotrichum aotearoa ICMP18537_18 |
|
|
| 4799128 |
Colletotrichum asianum ICMP18580_29 |
|
|
| 4799118 |
Colletotrichum clidemiae ICMP18658_19 |
|
|
| 4799123 |
Colletotrichum cordylinicola ICMP18579_11 |
|
|
| 4799111 |
Colletotrichum fructicola BY10_C1 |
|
|
| 4799104 |
Colletotrichum fructicola BY13_C1 |
|
|
| 4799134 |
Colletotrichum fructicola BY1_C2 |
|
|
| 4799097 |
Colletotrichum fructicola BY2_C1 |
|
|
| 4799095 |
Colletotrichum fructicola BY4_C1 |
|
|
| 4799113 |
Colletotrichum fructicola BY6_C2 |
|
|
| 4799110 |
Colletotrichum fructicola BY7_C2 |
|
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| 4799133 |
Colletotrichum fructicola BY8_C1 |
|
|
| 4799124 |
Colletotrichum fructicola CC_1 |
|
|
| 4799130 |
Colletotrichum fructicola ICMP18581_1 |
|
|
| 4799099 |
Colletotrichum fructicola ICMP18613_10 |
|
|
| 4799129 |
Colletotrichum fructicola ICMP18646_2 |
|
|
| 4799100 |
Colletotrichum fructicola ICMP18727_13 |
|
|
| 4799094 |
Colletotrichum fructicola NY2_C1 |
|
|
| 4799101 |
Colletotrichum fructicola PY3_C1 |
|
|
| 4799108 |
Colletotrichum fructicola PYI_C1 |
|
|
| 4799106 |
Colletotrichum fructicola TE2_G_2 |
|
|
| 4799136 |
Colletotrichum fructicola TE2_Y_1 |
|
|
| 4799116 |
Colletotrichum fructicola TE4_G_3 |
|
|
| 4799120 |
Colletotrichum fructicola XY2_C1 |
|
|
| 4799103 |
Colletotrichum fructicola XY3_C |
|
|
| 4799091 |
Colletotrichum fructicola XY6_C |
|
|
| 4799112 |
Colletotrichum gloeosporioides BY11_C |
5457
|
3067996
|
| 4799125 |
Colletotrichum gloeosporioides BY14_C1 |
5457
|
3067996
|
| 4799127 |
Colletotrichum gloeosporioides ICMP17821_4 |
5457
|
3067996
|
| 4799105 |
Colletotrichum gloeosporioides TE4_Y_1 |
5457
|
3067996
|
| 4799089 |
Colletotrichum horii ICMP10492_21 |
|
717645
|
| 4799093 |
Colletotrichum kahawae cigarro ICMP1_5 |
|
|
| 4799088 |
Colletotrichum kahawae cigarro ICMP1_6 |
|
|
| 4799137 |
Colletotrichum kahawae kahawae BY12_C2 |
|
|
| 4799102 |
Colletotrichum kahawae kahawae ICMP1_7 |
|
|
| 4799121 |
Colletotrichum musae ICMP19119_12 |
5464
|
1300839
|
| 4799098 |
Colletotrichum nupharicola ICMP18187_22 |
|
3279515
|
| 4799126 |
Colletotrichum psidii ICMP19120_23 |
|
3161973
|
| 4799122 |
Colletotrichum queenslandicum ICMP1778_24 |
|
|
| 4799119 |
Colletotrichum salsolae ICMP19051_25 |
|
|
| 4799139 |
Colletotrichum siamense BY15_C2 |
|
|
| 4799115 |
Colletotrichum siamense ICMP18578_8 |
|
|
| 4799138 |
Colletotrichum siamense ICMP18642_9 |
|
|
| 4799107 |
Colletotrichum theobromicola GM592_26 |
|
3069209
|
| 4799131 |
Colletotrichum ti ICMP4832_27 |
|
|
| 4799117 |
Colletotrichum tropicale ICMP18653_3 |
|
|
| 4799090 |
Colletotrichum xanthorrhoeae ICMP17903_28 |
0
|
3282852
|
| 4799109 |
Glomerella cingulata camelliae I_20 |
|
|