@ARTICLE{TreeBASE2Ref15374,
author = {Torsten Eriksson and M. S. Hibbs and Anne D Yoder and Charles F. Delwiche and Michael J Donoghue},
title = {The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of Chloroplast DNA.},
year = {2003},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {International Journal of Plant Sciences},
volume = {164},
number = {2},
pages = {},
abstract = {The phylogeny of Rosoideae was investigated using 44 species. Here we report new sequence data from the chloroplast trnL?trnF region as well as an increased sample of species. The analysis of these new data, along with previously used data from the nuclear ribosomal internal transcribed spacers (ITS), significantly increased resolution as well as confidence for Rosoideae phylogeny. Analyses were conducted using both Bayesian inference and parsimony methods on the data sets separately and in combination. The resulting phylogenies are congruent with all well supported clades of Rosoideae found in previous analyses of ITS or rbcL data. The support for these and other clades is improved and we consider several clades supported well enough to be named. The following clades are given phylogenetic definitions: Sanguisorbeae and its subclades Agrimoniinae and Sanguisorbinae, Potentilleae and its subclades Fragariinae and Potentilla, Roperculina (Rosa + Sanguisorbeae + Potentilleae), and Sanpotina (Sanguisorbeae + Potentilleae). Potentilla includes the P. anserina clade (Argentina) in our trnL/F and combined analyses, but this relationship is not resolved by ITS alone. The previously used genera Duchesnea (P. indica), Horkelia, and Ivesia are strongly supported as nested within Potentilla. Comarum (P. palustris and P. salesowianum), Sibbaldiopsis (P. tridentata), Dasiphora (P. fruticosa), and Drymocallis (P. arguta) join Alchemilla, Aphanes, Sibbaldia, Chamaerhodos, and Fragaria in the well supported Fragariinae clade outside of Potentilla. The monophyly of both Potentilleae and Sanguisorbeae is well supported, and the clades correspond to previously named tribes with the exception of Alchemilla and its segregate Aphanes which are nested within Potentilleae instead of in Sanguisorbeae. The position of Rubus is still not securely resolved.}
}
Taxa for tree 128776 of Study 982

Citation title:
"The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of Chloroplast DNA.".

This study was previously identified under the legacy study ID S868
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
4363510 |
Jahnula aquatica JN942354_R68_1 |
435389
|
3150097
|
4363508 |
Jahnula bipileata JN942353_F49_1 |
435390
|
|
4363506 |
Jahnula sangamonensis JN942349_A402_1B |
435392
|
|
4363504 |
Kirschsteiniothelia aethiops KU500571_MFLUCC_150424 |
147564
|
3021681
|
4363503 |
Kirschsteiniothelia aethiops MH182583_MFLUCC_16_1104 |
147564
|
3021681
|
4363509 |
Kirschsteiniothelia aethiops MH182586_S_783 |
147564
|
3021681
|
4363507 |
Kirschsteiniothelia aquatica MH182587_MFLUCC_16_1685 |
|
|
4363495 |
Kirschsteiniothelia arasbaranica KX621983_IRAN_2508C |
|
|
4363512 |
Kirschsteiniothelia arasbaranica KX621986_IRAN_2509C |
|
|
4363499 |
Kirschsteiniothelia cangshanensis MH182584_MFLUCC_16_1350 |
|
|
4363511 |
Kirschsteiniothelia fluminicola MH182582_MFLUCC_16_1263 |
|
|
4363494 |
Kirschsteiniothelia lignicola HQ441567_MFLUCC10_0036 |
|
|
4363498 |
Kirschsteiniothelia phoenicis MG859978_MFLUCC_18_0216 |
|
|
4363502 |
Kirschsteiniothelia rostrata KY697280_MFLUCC15_0619 |
|
|
4363493 |
Kirschsteiniothelia sp. CSN602 ITS5 |
|
|
4363501 |
Kirschsteiniothelia sp. CSN604 ITS5 |
|
|
4363497 |
Kirschsteiniothelia sp. CSN605 ITS5 CS026 |
|
|
4363513 |
Kirschsteiniothelia submersa KU500570_MFLUCC_150427 |
|
|
4363500 |
Kirschsteiniothelia submersa MH182585_S_601 |
|
|
4363496 |
Kirschsteiniothelia tectonae KU144916_MFLUCC_12_0050 |
|
|
4363505 |
Kirschsteiniothelia thujina KM982716_JF13210 |
|
|