@ARTICLE{TreeBASE2Ref15374,
author = {Torsten Eriksson and M. S. Hibbs and Anne D Yoder and Charles F. Delwiche and Michael J Donoghue},
title = {The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of Chloroplast DNA.},
year = {2003},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {International Journal of Plant Sciences},
volume = {164},
number = {2},
pages = {},
abstract = {The phylogeny of Rosoideae was investigated using 44 species. Here we report new sequence data from the chloroplast trnL?trnF region as well as an increased sample of species. The analysis of these new data, along with previously used data from the nuclear ribosomal internal transcribed spacers (ITS), significantly increased resolution as well as confidence for Rosoideae phylogeny. Analyses were conducted using both Bayesian inference and parsimony methods on the data sets separately and in combination. The resulting phylogenies are congruent with all well supported clades of Rosoideae found in previous analyses of ITS or rbcL data. The support for these and other clades is improved and we consider several clades supported well enough to be named. The following clades are given phylogenetic definitions: Sanguisorbeae and its subclades Agrimoniinae and Sanguisorbinae, Potentilleae and its subclades Fragariinae and Potentilla, Roperculina (Rosa + Sanguisorbeae + Potentilleae), and Sanpotina (Sanguisorbeae + Potentilleae). Potentilla includes the P. anserina clade (Argentina) in our trnL/F and combined analyses, but this relationship is not resolved by ITS alone. The previously used genera Duchesnea (P. indica), Horkelia, and Ivesia are strongly supported as nested within Potentilla. Comarum (P. palustris and P. salesowianum), Sibbaldiopsis (P. tridentata), Dasiphora (P. fruticosa), and Drymocallis (P. arguta) join Alchemilla, Aphanes, Sibbaldia, Chamaerhodos, and Fragaria in the well supported Fragariinae clade outside of Potentilla. The monophyly of both Potentilleae and Sanguisorbeae is well supported, and the clades correspond to previously named tribes with the exception of Alchemilla and its segregate Aphanes which are nested within Potentilleae instead of in Sanguisorbeae. The position of Rubus is still not securely resolved.}
}
Taxa for tree 128844 of Study 982

Citation title:
"The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of Chloroplast DNA.".

This study was previously identified under the legacy study ID S868
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
4366024 |
Preussia aemulans DQ468017_CBS_28767 |
325661
|
3199723
|
4365945 |
Preussia africana AY510417_s14 |
269684
|
5977898
|
4366544 |
Preussia africana AY510418_s17 |
269684
|
5977898
|
4365941 |
Preussia africana AY510420_s12 |
269684
|
5977898
|
4365913 |
Preussia africana AY510421_s15 |
269684
|
5977898
|
4365943 |
Preussia australis AY510411_s5 |
55178
|
3199725
|
4365996 |
Preussia australis AY510412_s6 |
55178
|
3199725
|
4366288 |
Preussia australis AY510413_s7 |
55178
|
3199725
|
4366332 |
Preussia fleischhakii DQ468018_CBS_36149 |
325672
|
3214902
|
4366107 |
Preussia fleischhakii DQ468019_CBS_56563 |
325672
|
3214902
|
4366217 |
Preussia intermedia AY510414_s3 |
269683
|
3199730
|
4365863 |
Preussia intermedia AY510415_s1 |
269683
|
3199730
|
4366068 |
Preussia intermedia AY510416_s4 |
269683
|
3199730
|
4366125 |
Preussia intermedia DQ468020_UAMH_7460 |
269683
|
3199730
|
4366436 |
Preussia mediterranea DQ468021_S22 |
|
|
4366476 |
Preussia mediterranea DQ468022_S23 |
|
|
4365901 |
Preussia mediterranea DQ468023_S30 |
|
|
4366492 |
Preussia mediterranea DQ468024_S31 |
|
|
4366270 |
Preussia mediterranea DQ468025_S34 |
|
|
4366398 |
Preussia minima AY510425_s21 |
93984
|
3199732
|
4365876 |
Preussia minima AY510426_s13 |
93984
|
3199732
|
4366412 |
Preussia minima AY510427_s26 |
93984
|
3199732
|
4366241 |
Preussia minima DQ468027_WQ64 |
93984
|
3199732
|
4366517 |
Preussia minimoides AY510422_s18 |
269686
|
3043957
|
4366510 |
Preussia minimoides AY510423_s10 |
269686
|
3043957
|
4366392 |
Preussia persica GQ292750_IRAN_844 |
|
|
4365973 |
Preussia polymorpha GQ292749_IRAN_845 |
|
|
4365939 |
Preussia pseudominima AY510424_s25 |
269687
|
5977900
|
4366416 |
Preussia similis AY510419_s19 |
269685
|
5977899
|
4366429 |
Preussia similis DQ468028_CBS_80473 |
269685
|
5977899
|
4366256 |
Preussia sp. CCF3831 FJ430777 CCF3831 |
|
|
4366387 |
Preussia sp. CSN626 ITS4 CS022 |
|
|
4366527 |
Preussia sp. ITS5 CSN1111 |
|
|
4365932 |
Westerdykella dispersa DQ468016_CBS_15667 |
45154
|
3218160
|
4366006 |
Westerdykella dispersa DQ468030_CBS_50875 |
45154
|
3218160
|
4366389 |
Westerdykella dispersa DQ468031_CBS_71271 |
45154
|
3218160
|
4366109 |
Westerdykella sp. WQ63 DQ468029 WQ63 |
|
|