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CQL query testing

The TreeBASE website can be searched using a subset of constructs from the CQL specification. For more information on how this is used, visit the TreeBASE help page about searching.

Your search has yielded 121 items:

	Tree Label	Tree Title	Tree Type	Tree Kind	Tree Quality	NTAX	Taxa
Tr25385	PAUP 118564	Tr25385				52	View Taxa
Tr25374	PAUP 39828	Tr25374				31	View Taxa
Tr48746	con 50 majrule	Pseudomonas syringae pv. actinidiae	Single	Species Tree	Preferred Tree	19	View Taxa
Tr25382	ML	Tr25382				44	View Taxa
Tr96079	Fig. 3D	Acidovorax citrulli MP concatenated sequence	Single	Gene Tree	Unrated	19	View Taxa
Tr9547	PAUP 1	Verticillium dahliae	Single	Species Tree	Unrated	31	View Taxa
Tr487	Fig. 6	Binucleate Rhizoctonia	Single	Species Tree	Unrated	42	View Taxa
Tr129538	top1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr2451	Fig. 2	Fusarium oxysporum	Single	Species Tree	Unrated	7	View Taxa
Tr129523	acl1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr60316	Tef1-a Mr Bayes Tree	Tr60316	Single	Gene Tree	Preferred Tree	46	View Taxa
Tr1794	Fig. 6	Puccinia allii	Single	Species Tree	Unrated	15	View Taxa
Tr1820	Fig. 4	Phytoplasma strains from lettuce	Single	Species Tree	Unrated	19	View Taxa
Tr2454	Fig. 4 MP	Fusarium oxysporum	Single	Species Tree	Unrated	20	View Taxa
Tr96076	Fig. S1C	Acidovorax citrulli MP analysis aave 1548	Single	Gene Tree	Unrated	20	View Taxa
Tr129541	tub2	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr115189	Imported tree 1	Tr115189				52	View Taxa
Tr25379	PAUP 9819	Tr25379				46	View Taxa
Tr116919	MLT	Powdery mildews 103 Amp strains and an outgroup strain	Single	Species Tree	Unrated	104	View Taxa
Tr25381	ML	Tr25381				56	View Taxa
Tr25372	PAUP 23027	Tr25372				35	View Taxa
Tr2641	Fig. 4	Phytophthora capsici	Single	Species Tree	Unrated	72	View Taxa
Tr115192	Imported tree 1	Tr115192				49	View Taxa
Tr25377	ML	Tr25377				109	View Taxa
Tr129528	dpe1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr2640	Fig. 3	Phytophthora capsici	Single	Species Tree	Unrated	44	View Taxa
Tr115188	Imported tree 1	Tr115188				49	View Taxa
Tr1792	Alt 2	Puccinia allii	Single	Species Tree	Unrated	15	View Taxa
Tr25630	Fig. 1b	Gibberella zeae from Barley	Single	Species Tree	Unrated	62	View Taxa
Tr129527	dpa1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr100268	CMS tree 1	Phytophthora nicotianae cms bayes	Consensus	Species Tree	Unrated	76	View Taxa
Tr25376	MP	Tr25376				109	View Taxa
Tr60064	PelD MrBayes Tree	Tr60064	Single	Gene Tree	Preferred Tree	16	View Taxa
Tr64542	Tree1	Emerging rice seed pathogens	Single	Species Tree	Unrated	37	View Taxa
Tr96077	Fig. S1A	Acidovorax citrulli MP analysis adk	Single	Gene Tree	Unrated	20	View Taxa
Tr117921	Fig. S4	Pyricularia The maximum parsimony tree of P. oryzae and P. grisea isolates inferred from calmodulin sequences	Single	Species Tree	Preferred Tree	143	View Taxa
Tr2426	Figure	Fusarium oxysporum	Single	Species Tree	Unrated	18	View Taxa
Tr129539	tsr1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr129522	IQTreeML	Fusarium 19 genes	Single	Species Tree	Unrated	89	View Taxa
Tr25375	ML	Tr25375				31	View Taxa
Tr25380	ML	Tr25380				46	View Taxa
Tr2455	Fig. 4 MB	Fusarium oxysporum	Consensus	Species Tree	Unrated	20	View Taxa
Tr129526	cpr1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr2317	ITS full	Eutypa dieback	Consensus	Species Tree	Unrated	52	View Taxa
Tr52975	NJ	Phytophthora nicotianae	Single	Species Tree	Unrated	95	View Taxa
Tr560	Fig. 2	Cercospora apii morphotype, 1 of 12 MP trees	Single	Species Tree	Unrated	41	View Taxa
Tr96078	Fig. S1D	Acidovorax citrulli MP analysis avrRx01	Single	Gene Tree	Unrated	20	View Taxa
Tr129525	cal1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr129540	tub1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr1088	Fig. 1A	Phosphate permease of Fusarium graminearum	Consensus	Species Tree	Unrated	63	View Taxa
Tr2457	Fig. 5 MB	Fusarium oxysporum	Consensus	Species Tree	Unrated	35	View Taxa
Tr5325	Fig. 1C	Colletotrichum acutatum, 2nd Intron GS	Single	Species Tree	Unrated	15	View Taxa
Tr2797	Fig. 4B	Dothistroma Needle Blight, 1 of 2 MPTs	Single	Species Tree	Unrated	21	View Taxa
Tr129532	lcb2	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr4093	Fig. 2	Fusarium oxysporum	Consensus	Species Tree	Unrated	27	View Taxa
Tr117918	Fig. 1	Pyricularia The maximum parsimony tree of P. oryzae and P. grisea inferred from combined sequences	Single	Species Tree	Preferred Tree	143	View Taxa
Tr3839	Fig. 3	Tilletia	Single	Species Tree	Unrated	26	View Taxa
Tr25384	ML	Tr25384				33	View Taxa
Tr115197	Imported tree 1	Tr115197				101	View Taxa
Tr68067	PAUP 1	Burkholderia T6SS	Single	Species Tree	Unrated	37	View Taxa
Tr60065	Prt1 MrBayes Tree	Tr60065	Single	Gene Tree	Preferred Tree	25	View Taxa
Tr5323	Fig. 1B	Colletotrichum acutatum, 2nd Intron G3PD	Single	Species Tree	Unrated	15	View Taxa
Tr115196	Imported tree 1	Tr115196				101	View Taxa
Tr1089	Fig. 1B	Phosphate permease of Fusarium graminearum	Consensus	Species Tree	Unrated	63	View Taxa
Tr110437	PAUP_1	Corynespora cassiicola	Single	Species Tree	Unrated	64	View Taxa
Tr96083	Fig. S1B	Acidovorax citrulli pilT	Single	Gene Tree	Unrated	20	View Taxa
Tr2456	Fig. 5 MP	Fusarium oxysporum	Single	Species Tree	Unrated	35	View Taxa
Tr114668	PAUP 1	Didymellaceae	Single	Species Tree	Unrated	113	View Taxa
Tr129535	rpb1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr129529	fas1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr129530	fas2	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr107750	Fig. 3	Xanthomonas 6 genes	Single	Species Tree	Unrated	13	View Taxa
Tr2453	Fig. 3 MB	Fusarium oxysporum	Consensus	Species Tree	Unrated	10	View Taxa
Tr2316	Fig. 2	Eutypa dieback	Consensus	Species Tree	Unrated	46	View Taxa
Tr25386	ML	Tr25386				52	View Taxa
Tr96082	Fig. 3C	Acidovorax citrulli NP analysis luxR	Single	Gene Tree	Unrated	20	View Taxa
Tr117919	Fig. S2	Pyricularia The maximum parsimony tree of P. oryzae and P. grisea isolates inferred from actin sequences	Single	Species Tree	Preferred Tree	143	View Taxa
Tr117920	Fig. S3	Pyricularia The maximum parsimony tree of P. oryzae and P. grisea isolates inferred from beta-tubulin sequences	Single	Species Tree	Preferred Tree	143	View Taxa
Tr25383	ML	Tr25383				78	View Taxa
Tr93592	MajRule	Xanthomonas	Consensus	Species Tree	Unrated	24	View Taxa
Tr25371	MP	Tr25371				130	View Taxa
Tr497	Fig. 1	Eutypa dieback	Consensus	Species Tree	Unrated	52	View Taxa
Tr1819	Fig. 3	Phytoplasma strains from lettuce	Single	Species Tree	Unrated	19	View Taxa
Tr114664	Imported tree 1	Alternaria	Single	Species Tree	Unrated	41	View Taxa
Tr2452	Fig. 3 MP	Fusarium oxysporum	Single	Species Tree	Unrated	10	View Taxa
Tr25370	ML	Tr25370				40	View Taxa
Tr1793	Alt 1	Puccinia allii	Single	Species Tree	Unrated	15	View Taxa
Tr114667	Imported tree 1	Colletotrichum	Single	Species Tree	Unrated	65	View Taxa
Tr115191	Imported tree 1	Tr115191				52	View Taxa
Tr129533	mcm7	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr344	Fig. 4A	Dothistroma Needle Blight, 1 of 2 MPTs	Single	Species Tree	Unrated	21	View Taxa
Tr5324	Fig. 1A	Colletotrichum acutatum, ITS	Single	Species Tree	Unrated	15	View Taxa
Tr2449	Fig. 1	Fusarium oxysporum	Single	Species Tree	Unrated	48	View Taxa
Tr2639	Fig. 2	Phytophthora capsici	Single	Species Tree	Unrated	71	View Taxa
Tr115193	Imported tree 1	Tr115193				52	View Taxa
Tr129537	tef1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr129536	rpb2	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr25629	Fig. 1a	Gibberella zeae from Barley	Single	Species Tree	Unrated	62	View Taxa
Tr48745	con 50 majrule	Pseudomonas syringae pv. actinidiae	Single	Species Tree	Alternative Tree	19	View Taxa
Tr115195	Imported tree 1+	Tr115195				101	View Taxa
Tr52974	BI	Phytophthora nicotianae	Consensus	Species Tree	Unrated	96	View Taxa
Tr52973	MLT	Phytophthora nicotianae	Single	Species Tree	Unrated	96	View Taxa
Tr114535	Fig. 1	Colletotrichum acutatum Multilocus phylogenetic analysis	Single	Species Tree	Preferred Tree	224	View Taxa
Tr25378	ML	Tr25378				35	View Taxa
Tr96080	Fig. 3B	Acidovorax citrulli MP analysis glta	Single	Gene Tree	Unrated	21	View Taxa
Tr60063	Sge1 MrBayes Tree	Tr60063	Single	Gene Tree	Preferred Tree	37	View Taxa
Tr4537	Fig. 1	Pythium irregulare	Single	Species Tree	Unrated	69	View Taxa
Tr96081	Fig. 3A	Acidovorax citrulli MP analysis gyrB	Single	Gene Tree	Unrated	24	View Taxa
Tr115190	Imported tree 1	Tr115190				49	View Taxa
Tr129534	pgk1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr4539	Fig. 3	Pythium irregulare	Single	Species Tree	Unrated	32	View Taxa
Tr25373	ML	Tr25373				51	View Taxa
Tr129531	ku70	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr115194	Imported tree 1	Tr115194				49	View Taxa
Tr129542	FSSCIQTree	Fusarium tef1 ITS LSU RPB2	Single	Species Tree	Unrated	79	View Taxa
Tr115198	Imported tree 1	Tr115198				101	View Taxa
Tr2450	Fig. 1	Fusarium oxysporum	Single	Species Tree	Unrated	48	View Taxa
Tr115187	Imported tree 1	Tr115187				52	View Taxa
Tr2349	Fig. 7	Mitoviral RNA-dependent RNA polymerase	Consensus	Species Tree	Unrated	14	View Taxa
Tr129524	act1	Fusarium	Single	Species Tree	Unrated	89	View Taxa
Tr4538	Fig. 2	Pythium irregulare	Single	Species Tree	Unrated	43	View Taxa