TreeBASE Search-Analyses for study 14035

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Analyses for Study 14035

Citation title: "Dothiorella vidmadera, a novel species from grapevines in Australia and notes on Spencermartinsia".

Study name: "Dothiorella vidmadera, a novel species from grapevines in Australia and notes on Spencermartinsia".

This study is part of submission 14035 (Status: Published).

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Phylogenetic analyses were performed with MEGA 5.1 (Tamura et al. 2011) by Maximum Parsimony (MP) using the heuristic search option with 1000 random addition sequence replicates and the tree bisection-reconnection (TBR) branch-swapping algorithm (Nei and Kumar 2000). Gaps were treated as missing data and all characters were unordered and equally weighted. Branches corresponding to partitions reproduced in less than 50% of trees were collapsed and all equally parsimonious trees were saved. Tree length, consistency index (CI), retention index (RI) and composite index were calculated. Trees were rooted to Botryosphaeria dothidea (Moug.: Fr.) Ces. & De Not. and statistical support to assess robustness of inferred groups was estimated using 1000 bootstrap replicates (Felsenstein 1985).

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