TreeBASE Search-Analyses for study 18005

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Analyses for Study 18005

Citation title: "Morphological and phylogenetic analyses of Phytopythium Abad, de Cock, Bala, Robideau, A.M. Lodhi & Lévesque species from Brazil".

Study name: "Morphological and phylogenetic analyses of Phytopythium Abad, de Cock, Bala, Robideau, A.M. Lodhi & Lévesque species from Brazil".

This study is part of submission 18005 (Status: Published).

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ITS: ML Analysis based on the Hasegawa-Kishino-Yano model. The tree with the highest log likelihood (-3289.0453) is shown. Initial tree(s) for the heuristic search were obtained by applying the Neighbor-Joining method to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach. A discrete Gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameter = 0.5458)). The analysis involved 43 nucleotide sequences, all positions containing gaps and missing data were eliminated, resulting in 505 positions in the final dataset.

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