@ARTICLE{TreeBASE2Ref15348,
author = {Jenny Eklof and Fredrik Pleijel and Per Sundberg},
title = {Phylogeny of benthic Phyllodocidae (Polychaeta) based on morphological and molecular data},
year = {2007},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Molecular Phylogenetics and Evolution},
volume = {},
number = {},
pages = {},
abstract = {A combined molecular (18S rDNA, 28S rDNA, 16S rDNA and COI) and morphological analysis of the benthic phyllodocids is presented for the first time. Nineteen phyllodocids and two outgroup taxa are assessed using parsimony, maximum likelihood and Bayesian analyses. We demonstrate high degrees in homoplasy in the traditionally used morphological phyllodocid characters, and show that all the three current subfamilies Phyllodocinae, Eteoninae and Notophyllinae are non-monophyletic. The genera Eulalia, Eumida, Protomystides, Pseudomystides, Pterocirrus and Sige form a well-supported group, as does Mystides and Nereiphylla. Another clade with strong support includes Eteone and Paranaitis, although with Eteone nested within a paraphyletic Paranaitis. The relationship between these two taxa indicate that the unusual arrangement of modified cirri on the first segments in Eteone is due to a fusion of segment 1 and 2 where the cirri of segment 1 have been reduced. Eulalia is non-monophyletic and should be split, minimally into two groups. Our results are ambiguous regarding the ancestral phyllodocid condition of absencepresence of median antenna or nuchal papilla and uniramous or biramous parapodia, but shows that the absence of cirri on segment 3 (previously an apomorphy, for e.g., Mystides, Pseudomystides and Hesionura) is maximally homoplastic.}
}
Matrix 1941 of Study 1828
Citation title:
"Phylogeny of benthic Phyllodocidae (Polychaeta) based on morphological and molecular data".
This study was previously identified under the legacy study ID S1803
(Status: Published).
Matrices
Title: 16S
Description: Legacy TreeBASE Matrix ID = M3299
Rows
|
Taxon Label |
Row Segments |
Characters 1?–30 |
| Aglaophamus malmgreni |
(none)
|
CCCGGTGAAAATT--TTTAACGGCCGCGGT |
| Lacydonia eliassoni |
(none)
|
CCCAGTGATAT---ATTTAACGGCCGCGGT |
| Chaetoparia nilssoni |
(none)
|
CCCAGTGA---GGAATTTAACGGCTGCGGT |
| Eteone picta |
(none)
|
CCCAGTGA---TTTATTTAACGGCCGCGGT |
| Eulalia bilineata |
(none)
|
CCCGGTGACATAAAGTTTAACGGCCGCGGT |
| Eulalia expusilla |
(none)
|
CCCGGTGAC-TTGGGTTTAACGGCCGCGGT |
| Eulalia mustela |
(none)
|
CCCGGTGAAATTA--TTTAACGGCCGCGGT |
| Eulalia viridis |
(none)
|
CCCAGTGATAATA--TTCAACGGCCGCGGT |
| Eumida arctica |
(none)
|
CCCGGTGATA--TTATTTAACGGCCGCGGT |
| Eumida sanguinea |
(none)
|
CCCGGTGATAAATTATTTAACGGCCGCGGT |
| Mystides caeca |
(none)
|
CCCGGTGG----GGATTTAACGGCTGCGGT |
| Nereiphylla lutea |
(none)
|
CCCGGTGATA-----TTTAACGGCTGCAGT |
| Paranaitis wahlbergi |
(none)
|
CCCAGTGA---AAATTTTAACGGCCGCGGT |
| Phyllodoce groenlandica |
(none)
|
CCCAGTGT---ATATATTAACGGCCGCGGT |
| Phyllodoce longipes |
(none)
|
CCCGGTGT---AT-TATTAACGGCCGCGGT |
| Protomystides exigua |
(none)
|
CCCGGTGA---TAAATTTAACGGCCGCGGT |
| Pseudomystides limbata |
(none)
|
CCCGGTGAC-TTAGGTTTAACGGCCGCGGT |
| Pterocirrus macroceros |
(none)
|
CCCGGTGATATTAA-TTTAACGGCCGCGGT |
| Sige fusigera |
(none)
|
CCCAGTGA-ATATA--TTAACGGCCGCGGT |
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