@ARTICLE{TreeBASE2Ref18154,
author = {Brenda D Wingfield and Lars Ericson and Timothy M. Szaro and Jeremy J. Burdon},
title = {Phylogenetic patterns in the Uredinales.},
year = {2004},
keywords = {},
doi = {10.1071/AP04020},
url = {},
pmid = {},
journal = {Australasian Plant Pathology},
volume = {33},
number = {3},
pages = {327--335},
abstract = {Rusts (Basidiomycetes: Uredinales) are a large, diverse group of obligate biotrophic fungi that include many important plant pathogens. Phylogenetic relationships within the group are poorly understood, with between two and fourteen families being recognized on morphological and host taxonomic grounds. We report the first analysis of broad-scale relationships within the Uredinales using DNA sequence data from the small subunit gene of the ribosomal RNA operon. A major split is obvious between genera that have aecial stages on gymnosperm hosts and those with this stage on angiosperms. This finding is in accord with the early taxonomic two-family treatments of the Uredinales. Within the major clades there is evidence of incongruency with morphologically defined families. Racospermyces Maravalia, Hemileia and Caeoma are basal to the major phylogenetic sub-division and probably represent the most ancient rust lineages. Using these sequence data we estimate that the rusts diverged from their closest relatives around 150 million years ago.}
}
Matrix 32944 of Study 1168
Citation title:
"Phylogenetic patterns in the Uredinales.".
This study was previously identified under the legacy study ID S1075
(Status: Published).
Matrices
Title: MbxK alignment
Rows
|
Taxon Label |
Row Segments |
Characters 1?–30 |
| Caldanaerobacter subterraneus yonseiensis_ERM91258.1 |
(none)
|
MKLDKESIIELLNQ--KGVEVLDLYPNQIS |
| Caloramator australicus WP_008908961.1 |
(none)
|
MKLSKEEIIDLLKQ--RGLEVNDLYPTQIS |
| Thermoanaerobacter ethanolicus EGD52032.1 |
(none)
|
MKLDKESIIELLNQ--KGVEVLDLYPNQIS |
| Thermoanaerobacter siderophilus EIW00257.1 |
(none)
|
MKLDKESIIELLNQ--KGVEVLDLYPNQIS |
| Thermoanaerobacter thermohydrosulfuricus EMT39682.1 |
(none)
|
MKLDKESIIELLNQ--KGVEVLDLYPNQIS |
| Thermoanaerobacter wiegelii YP_004818842.1 |
(none)
|
MKLDKESIIELLNQ--KGVEVLDLYPNQIS |
| Thermobrachium celere WP_018663228.1 |
(none)
|
--MQKSDIVKLLLD--RGYSVFDLYHNQIA |
| Thermosipho africanus YP_002335463.1 |
(none)
|
MTNSMNNALEKLKSLIGEFELIEIDEREVK |
| Thermosipho melanesiensis YP_001306459.1 |
(none)
|
MTSFMSDVIKKIEKIFNDIEIVEIDSREIK |
Columns
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