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Citation
Taxa
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Trees
Analyses
Matrix 16617 of Study 14096
Citation title: "Evidence for a phototransduction cascade in an early brachiopod embryo".
Study name: "Evidence for a phototransduction cascade in an early brachiopod embryo".
This study is part of submission 14096
(Status: Published).
Matrices
Title: opsins
Description: opsins
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Terebratalia transversa Go opsin2 | (none) | ---------MEVETCYRI------------ |
| Terebratalia transversa Go opsin1 | (none) | ---------MLATTTNHNLTSLSTHLSTHD |
| Mus musculus RGR | (none) | ---------VLA------------------ |
| Bos taurus RGR | (none) | ---------VLA------------------ |
| Homo sapiens RGR | (none) | ---------VLA------------------ |
| Terebratalia transversa R opsin | (none) | HILFGT--YISI------------------ |
| Schistosoma mansoni Opsin | (none) | YYLVGI--YIGI------------------ |
| Platynereis dumerilii R opsin | (none) | HYAVAA--WMTF------------------ |
| Mizuhopecten yessoensis Gq rhodopsin | (none) | HYIIGV--YITI------------------ |
| Enteroctopus dofleini Opsin | (none) | YYSVGI--FIGV------------------ |
| Loligo forbesii Opsin | (none) | YYSLGI--FIAI------------------ |
| Alloteuthis subulata Opsin | (none) | YYSLGI--FIAI------------------ |
| Sepia officinalis Opsin | (none) | YYSLGI--FIGI------------------ |
| Todarodes pacificus Opsin | (none) | YYSLGI--FIGI------------------ |
| Xenopus laevis Melanopsin | (none) | LYTIGS--FILI------------------ |
| Mus musculus Melanopsin | (none) | HYTLGT--VILL------------------ |
| Homo sapiens Melanopsin | (none) | HYTLGT--VILL------------------ |
| Limulus polyphemus Ocellus opsin | (none) | YSILGV--AMII------------------ |
| Hemigrapsus sanguineus Rh1 | (none) | HYLLGV--VYLF------------------ |
| Mus musculus MLT | (none) | --FMFC--AMVI------------------ |
| Xenopus laevis MLT | (none) | --ALAV--VLIF------------------ |
| Homo sapiens Somatostatin | (none) | --LVPV--LYLL------------------ |
| Drosophila melanogaster Allatostatin | (none) | --IVPV--FFGI------------------ |
| Homo sapiens NK 1 receptor | (none) | --LWAA--AYTV------------------ |
| Drosophila melanogaster Tachykinin like receptor | (none) | --IWAI--IFGL------------------ |
| Terebratalia transversa C opsin | (none) | --IIVL--VLFV------------------ |
| Platynereis dumerilii C opsin | (none) | --CAAY--LFFI------------------ |
| Homo sapiens Encephalopsin | (none) | --LALL--LGSI------------------ |
| Mus musculus Encephalopsin | (none) | --LALL--LGCL------------------ |
| Anopheles gambiae GPRop11 | (none) | --AAVT--LFFI------------------ |
| Anopheles gambiae GPRop12 | (none) | --SAVT--LFFI------------------ |
| Takifugu rubripes TMT opsin | (none) | --VVSV-FLGFI------------------ |
| Branchiostoma belcheri Opsin5 | (none) | --VAGV--IAII------------------ |
| Branchiostoma belcheri Opsin4 | (none) | --IATG--LALI------------------ |
| Ciona intestinalis Opsin1 | (none) | --LCVY--MTFV------------------ |
| Danio rerio VAL opsin | (none) | --LAAL--MFVV------------------ |
| Petromyzon marinus Pineal opsin | (none) | --LAAL--MGTI------------------ |
| Oncorhynchus nerka LWS | (none) | --VSTLW-MIIV------------------ |
| Geotria australis LWS | (none) | --LTSFW-MIIV------------------ |
| Anolis carolinensis P opsin | (none) | --VAVL--MGLV------------------ |
| Geotria australis SWS | (none) | --QAAF--MGFV------------------ |
| Rana catesbeiana SWS1 | (none) | --QAIF--MGVV------------------ |
| Rattus norvegicus Blue cone opsin | (none) | --QAAF--MGFV------------------ |
| Cynops pyrrhogaster SWS1 | (none) | --QTAF--MGFV------------------ |
| Petromyzon marinus RhA | (none) | --LAAY--MFFL------------------ |
| Geotria australis RhA | (none) | --LAAY--MFFL------------------ |
| Latimeria chalumnae Rh2 | (none) | --LAAY--MFFL------------------ |
| Homo sapiens Rhodopsin | (none) | --LAAY--MFLL------------------ |
| Mus musculus Rhodopsin | (none) | --LAAY--MFLL------------------ |
| Latimeria chalumnae Rh1 | (none) | --LCAY--MFLL------------------ |
| Geotria australis RhB | (none) | --ISAY--VFTL------------------ |
| Geotria australis SWS2 | (none) | --MSAF--MLFL------------------ |
| Xenopus laevis Green rod opsin | (none) | --ISAF--MLFT------------------ |
| Gallus gallus Blue Cone opsin | (none) | --MAAF--MFLL------------------ |
| Branchiostoma belcheri Amphiop2 | (none) | --IMGV--YLTI------------------ |
| Branchiostoma belcheri Amphiop1 | (none) | ----AI--YITL------------------ |
| Mizuhopecten yessoensis Go rhodopsin | (none) | --IIGI--FISI------------------ |
| Branchiostoma belcheri Amphiop3 | (none) | --IVGL--YLFV------------------ |
| Mus musculus Peropsin | (none) | --VIAA--YLIV------------------ |
| Homo sapiens Peropsin | (none) | --IVAT--YLIM------------------ |
Columns
None of the columns has a description.
