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Matrix 30557 of Study 17059
Citation title: "Phylogenetic and geographic relationships of severe fever with thrombocytopenia syndrome virus".
Study name: "Phylogenetic and geographic relationships of severe fever with thrombocytopenia syndrome virus".
This study is part of submission 17059
(Status: Published).
Matrices
Title: Severe fever with thrombocytopenia syndrome virus MsegmentwithoutHeartlandV
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Severe fever with thrombocytopenia syndrome virus 003A Ehime 2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 004A Miyazaki 2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 005A Hiroshima 2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 010A Nagasaki 2005 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 030A Saga 2010 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 032A Nagasaki 2005 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 035A Ehime 2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 053A Saga 2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 054A Kagoshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 055A Yamaguchi 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 057A Yamaguchi 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 060A Tokushima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 062A Kumamoto 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 064A Nagasaki 2013 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus 066A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 067A Kagoshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 069A Ehime 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 070A Ehime 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 071A Hiroshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 072A Ehime 2013 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus 073A Kagoshima 2013 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus 075A Kochi 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 077A Ehime 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 078A Kumamoto 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 082A Nagasaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 084A Okayama 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 086A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 087A Shimane 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 089A Yamaguchi 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 090A Okayama 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 097A Hyogo 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 100A Hyogo 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 104A Kagoshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 105A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 106A Ehime 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 107A Hiroshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 108A Tokushima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 112A Hiroshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 114A Hiroshima 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 117A Kumamoto 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 119A Kumamoto 2013 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus 120A Ehime 2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 121A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 123A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 124A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 125A Nagasaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 127A Miyazaki 2013 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 128A Miyazaki 2014 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 129A Miyazaki 2014 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 153A Kagoshima 2014 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 161A Wakayama 2014 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 20 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.CBX | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.FQM | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.LZR | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.T112 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.WJ | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.WJQ | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.WSQ | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.WWG | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.WWX | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2010.ZGQ | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YGS5 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YGS7 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YPQ11 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YPQ12 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YPQ17 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YSC22 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YSC60 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YSH45 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YSH52 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2011YXX9 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YGS10 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YGS4 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSC6 | (none) | ACACAAAGGCGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH10 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH104 | (none) | ACACAAAGGAGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH105 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH107 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH14 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH16 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH27 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH37 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH6 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH86 | (none) | ACACAAAGGAGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH89 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH9 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH91 | (none) | ACACAAAGGCGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH92 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YSH93 | (none) | ACACAAAGGAGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 2012YXX1 | (none) | ACACAAGGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus 69 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus AH12 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus AH15 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus AHL.China.2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus AHZ.China.2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus Gangwon.Korea.2012 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HB154.China.2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HB155.China.2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HB156.China.2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HB29 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HL.Adult.G2 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HL.Egg.G2 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HL.Injected | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HL.Larvae.G2 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HL.Nymph.G2 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HN13 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HN6 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus HZM | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JN1.China.2010 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2007.01 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2011.004 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2011.013.1 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2011.027 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2011.034 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2011.062 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2011.109 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2012.020 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2012.035 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2012.goat01 | (none) | GCCAGTAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS2012.tick01 | (none) | ACCAGTAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS24 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS26 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS3 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS4 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus JS6 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN2 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN2012.14 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN2012.34 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN2012.41 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN2012.42 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN2012.58 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus LN3 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus SD24 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus SD4 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus SDLZtick12.2010 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus WCH.97.HN.China.2011 | (none) | ACACAAAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus WSQ | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus XCQ.A112M | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus YG1 Yamaguchi 2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus Zhao | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus zjzs02 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus ZLD | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus Zhejiang.01.2011 | (none) | ACACAGAGACGGCCAACAATGATGAAAGTC |
| Severe fever with thrombocytopenia syndrome virus KABET | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAJJH | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT7 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT6 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT5 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACBT5 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACBT4 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KASUT4 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT4 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT3 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KASUT3 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGBT3 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACBT3 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGBT2 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACNT2 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACBT2 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACBT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KASUT2 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KASUT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KACNT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KADGT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGBT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT2 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KABST2 | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGGT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KAGNT | (none) | ------------------------------ |
| Severe fever with thrombocytopenia syndrome virus KABST | (none) | ------------------------------ |
Columns
None of the columns has a description.
