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Matrix 37877 of Study 17170
Citation title: "New species and records of the lichens genus Graphis (Graphidaceae, Ascomycota) from Thailand, with a key to currently known species".
Study name: "New species and records of the lichens genus Graphis (Graphidaceae, Ascomycota) from Thailand, with a key to currently known species".
This study is part of submission 17170
(Status: Published).
Matrices
Title: Symbiont of Kentrophoros 16S rRNA
Description: Symbiont of Kentrophoros and basal Gammaproteobacteria 16S rRNA alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| uncultivated environmental bacteria JF344692.1.1512 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. LPFa_S313 | (none) | ----CTGAAGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. UNK BY8 | (none) | ----CTGAAGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. TC BZ126 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. LFY BY7 | (none) | ----CTGAAGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. SD S127 | (none) | ----CTGAAGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. TUN BY2 | (none) | ----CTGAAGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. FW BZ106 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. FW BZ131 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. BT S243 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. FM BZ176 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. G BZ185 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. H SA2B15 | (none) | ----CTGAAGAGTTTGA-TCCTGGCTCAGA |
| Thiotrophic ectosymbiont of Kentrophoros sp. FB S136 | (none) | ------------------------------ |
| Thiotrophic ectosymbiont of Kentrophoros sp. FBG S435 | (none) | ------------------------------ |
| uncultivated environmental bacteria JQ800923.1.1507 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria EU652572.1.1506 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria JQ800972 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria JX504483.1.1538 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria DQ513032.1.1504 | (none) | --------AGGGTTTGA-TCCTGGCTCAGG |
| uncultivated environmental bacteria HE817831.1.1534 | (none) | --------AGAGTTTGA-TTCTGGCTCAGA |
| uncultivated environmental bacteria JQ347371.1.1498 | (none) | ---------GAGTTTGA-TTCTGGCTCAGA |
| uncultivated environmental bacteria JN977228.1.1533 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria AB694061.1.1406 | (none) | ------------------------------ |
| uncultivated environmental bacteria JF809744.1.1399 | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| uncultivated environmental bacteria FN553505.1.1500 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria JF344142.1.1499 | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| uncultivated environmental bacteria FJ905747.1.1417 | (none) | ------------------------------ |
| uncultivated environmental bacteria JF272102.1.1499 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| uncultivated environmental bacteria KC009908.1.1512 | (none) | TAGAGTTTAGAGTTTGA-TCTTGGCTCAGA |
| Diplorickettsia massiliensis | (none) | -----------------------------A |
| Aquicella lusitana | (none) | ------------------------------ |
| Coxiella burnetii | (none) | ----------------------------GA |
| Alkalilimnicola ehrlichii MLHE-1 | (none) | -----------------------------A |
| Alkalispirillum mobile | (none) | -----------------------------A |
| Halorhodospira neutriphila | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Halorhodospira halophila SL1 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Arhodomonas aquaeolei | (none) | -?AACTGAAGAGTTTGA-TCCTGGCTCAGA |
| Nitrococcus mobilis | (none) | --------AGAGTTTGATTTATGGCTCAGA |
| Aquisalimonas asiatica | (none) | ------TTAGAGTTTGA-TCCTGGCTCAGA |
| Natronocella acetinitrilica | (none) | -----------GTTTGA-TCCTGGCTCAGA |
| Nitrosococcus halophilus | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| Nitrosococcus oceani | (none) | -----------GTTTGA-TCATGGCTCAGA |
| Ectothiorhodospira shaposhnikovii | (none) | ------TTGAGTTTTGA-TCCTGGCTCAGA |
| Ectothiorhodosinus mongolicus | (none) | ------------------------------ |
| Thiorhodospira sibirica ATCC 700588 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Thioalkalivibrio denitrificans | (none) | --------------------CTGGCTCAGA |
| Thioalkalivibrio jannaschii | (none) | ------TGATTGTTTGA-TCCTGGCTCAGA |
| Thiohalophilus thiocyanatoxydans | (none) | ------------------------------ |
| Thioalkalispira microaerophila | (none) | ------------------------------ |
| gill symbiont of Solemya reidi | (none) | ------------TTTGA-TCCTGGCTCAGA |
| Chromatium okenii | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| Thiocystis violascens DSM198 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Allochromatium vinosum DSM 180 | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Lamprocystis roseopersicina | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| Thiodictyon bacillosum | (none) | ---------------------------AGA |
| Thiocapsa roseopersicina | (none) | -------TAGAGTTTGA-TCATGGCTCAGA |
| Thiophaeococcus mangrovi | (none) | ------------------------------ |
| Thiorhodococcus minor | (none) | -----------------------------A |
| Thiococcus pfennigii | (none) | -----------------------------A |
| Rhabdochromatium marinum | (none) | -----------------------------A |
| Thiorhodovibrio winogradskyi | (none) | -----------------------------A |
| Thiohalocapsa halophila | (none) | -----------------------------A |
| Lamprocystis purpurea | (none) | ------------------------------ |
| Halochromatium glycolicum | (none) | -----------------------------A |
| Gamma1 endosymbiont ex Olavius algarvensis | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Gamma1 endosymbiont ex Olavius crassitunicatus | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Candidatus Thiobios zoothamnicoli ex Zoothamnium niveum | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| gill endosymbiont ex Alviniconcha hessleri | (none) | ------------------------------ |
| endosymbiont ex Ifremeria nautilei | (none) | ------------------------------ |
| Sulfurivirga caldicuralii | (none) | -------TAGAGTTTGA-TCCTGGCTCAGA |
| Thioprofundum hispidum | (none) | -------------TTGA-TCCTGGCTCAGA |
| Leucothrix mucor | (none) | --------AGAGTTTGA-T??TGGCTCAGA |
| gamma proteobacterium ectosymbiont ex Rimicaris exoculata | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Thiothrix flexilis | (none) | -----------------------------A |
| Gamma 3 endosymbiont ex Olavius algarvensis | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| thiotrophic bacterial endosymbiont ex Bathymodiolus heckerae | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Candidatus Ruthia magnifica str. Cm ex Calyptogena magnifica | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| thiotrophic endosymbiont of Bathymodiolus mauritanicus | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| thioautotrophic gill symbiont ex Bathymodiolus azoricus | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| endosymbiont of Lamellibrachia columna | (none) | ------------------------TGCTAG |
| endosymbiont ex Escarpia spicata | (none) | CT---------------------------A |
| Candidatus Endorifita persephone ex Riftia pachyptila | (none) | ----------------------GGCCTAGA |
| Sedimenticola selenatireducens | (none) | --------------GAT-CCTTGGCTCAGA |
| uncultured gill symbiont ex Codakia orbicularis | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Pseudoxanthomonas spadix | (none) | ------------------------------ |
| Xanthomonas theicola | (none) | ------------------------------ |
| Lysobacter koreensis | (none) | ------------------CCCCGTC---GA |
| Luteimonas aestuarii | (none) | ------------------------------ |
| Xanthomonas perforans | (none) | -------------TTGA-TCCTGGCTCAGA |
| Stenotrophomonas maltophilia | (none) | ------------------------------ |
| Xylella fastidiosa | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Arenimonas malthae | (none) | -------------------------TCAGA |
| Beggiatoa alba B18LD | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Dichelobacter nodosus VCS1703A | (none) | --AACTGAAGAGTTTGA-TTCTGGCTCAGA |
| Suttonella ornithocola | (none) | ----------------------------GA |
| Cardiobacterium hominis ATCC 15826 | (none) | --------AGAGTTTGA-TTCTGGCTCAGA |
| Thioalkalibacter halophilus | (none) | -----------GTTTGA-TCCTGGCTCAGA |
| Halothiobacillus neapolitanus | (none) | -------TAGAGTTTGA-TCATGGCTCAGA |
| Halothiobacillus kellyi | (none) | -------TAGAGTTTGA-TCATGGCTCAGA |
| Francisella philomiragia | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| Caedibacter taeniospiralis | (none) | ---------------------------A?A |
| Piscirickettsia salmonis | (none) | --------AGAGTTTGA-TCCTGGCTCAGA |
| Fluoribacter dumoffii | (none) | ------------------------------ |
| Legionella wadsworthii | (none) | ATCTA------------------------- |
| Tatlockia maceachernii | (none) | ------------------------------ |
| Methylomonas aurantiaca | (none) | -??ACTGAAGAGTTTGA-TCATGGCTCAGA |
| Methylomonas methanica | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| Methylobacter whittenburyi | (none) | -????????GAGTTTGA-TCATGGCTCAGA |
| Methylomicrobium agile | (none) | -?TACTGAAGAGTTTGA-TCATGGCTCAGA |
| Methylosphaera hansonii | (none) | ------------------------------ |
| Rheinheimera chironomi | (none) | -TGGATCCAGACTTTGA-TTATGGCTCAGA |
| Methylophaga thalassica | (none) | ---------------------------AGA |
| Methylocaldum szegediense | (none) | --------AGAGTTTGA-TCATGGCTCAGA |
| Methylococcus capsulatus | (none) | -?AACTGAAGAGTTTGA-TCATGGCTCAGA |
Columns
None of the columns has a description.
