Matrix 15760 of Study 9970
Matrices
Title: Phyteuma
Download all Row Segment MetadataRows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Campanula persicifolia | View | TCGAACCCTGCATAGCAGAACAACCCGCGA |
Asyneuma lobelioides | View | TCGAACACTGCATAGCAGAACAACCCGCGA |
Asyneuma pichleri | View | TCGAACCCTGCATAGCAGAACAACCCGCGA |
Asyneuma limonifolium | View | TCGAACACTGCATAGCAGAACAACCCGCGA |
Asyneuma limonifolium PP07 | View | TCGAACACTGCATAGCAGAACAACCCGCGA |
Campanula uniflora | View | TCGAACCCTGCATAGCAGAACAACCCGTGA |
Asyneuma trichocalycinum | View | TCGAACCCTGCATAGCAGAACAACCCGCGA |
Asyneuma campanuloides | View | TCGAACCCTGCATAGCAGAACAACCCGCGA |
Asyneuma canescens HBV | View | TCGAACCCTGCATAGCAGAACAACCCGCGA |
Asyneuma canescens Croatia | View | TCGAACCCTGCATAGCAGAACAACCCGCGA |
Petromarula pinnata | View | TCGAATCCTGCATAGCAGAACAACC{CT}G |
Petromarula pinnata 2 | View | TCGAATCCTGCATAGCAGAACAACCCGTGA |
Phyteuma orbiculare 179b | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare 92 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare 171 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare 72a | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare Balk030705 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare 225a | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare ST10579 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare 180605 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma vagneri 242b | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma betonicifolium PP 3831 | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma charmelii PP13 | View | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN |
Phyteuma pyrenaicum 180 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma spicatum Coer | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma spicatum Kro | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma ovatum 64 | View | TCGAACCCTGCATAGCAGAACAACC-G{CT |
Phyteuma spicatum 81 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma nigrum CZ | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma gallicum 503 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma spicatum Tatra | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma spicatum 175 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma spicatum 188 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma nigrum 256 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma ovatum 57 | View | TCGAACCCTGCATAGCAGAACAACC-G{CT |
Phyteuma tetramerum | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma vagneri 255 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma betonicifolium 72a | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma betonicifolium IBD G191 | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma persicifolium 55 | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma persicifolium Kro | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scorzonerifolium 72a | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scorzonerifolium 74 | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scorzonerifolium App | View | TCAA{AT}CCCTGCATAGCAGAACAACC-G |
Phyteuma michelii 73 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma cordatum | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma villarsii P1 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma charmelii WA | View | TCGAACCCTGCATAGCAGAACAACC-GCAA |
Phyteuma villarsii P3 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma villarsii S499 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma charmelii 179 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma cordatum PP18 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma cordatum PP19 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma gallicum PP20 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma michelii PP10 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scorzonerifolium PP11 | View | TCAAACCCTGCATAGCAGAACAACC-G{AC |
Phyteuma nigrum PP25 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare 3836 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma ovatum 3891 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma scorzonerifolium PP02 A | View | TCAAACCCTGCATAGCAGAACAACC-GAGA |
Phyteuma scorzonerifolium PP02 B | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scorzonerifolium PP02 C | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma spicatum PP26 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma orbiculare PP17 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma tetramerum PP15 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma vagneri PP24 C | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma vagneri PP24 A | View | TCGAACCCTGCATAGCACAACAACC-GCGA |
Phyteuma villarsii PP21 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma persicifolium PP08 | View | TCAAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. columnae 11038 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Physoplexis comosa 168 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Physoplexis comosa 164 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Physoplexis comosa PP05 | View | TCGAACCCTGCATAGCAGAACAACC-GTGA |
Phyteuma hemisphaericum 180 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 81 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 56 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 3875A | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 3912A | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 3882B | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 3817 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 3851 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hemisphaericum 3910B | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma humile 90 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma humile 191 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. globulariifolium 51 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. globulariifolium 93 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. pedemontanum 187 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. pedemontanum 84 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. pedemontanum 3908 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. pedemontanum PP12 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma globulariifolium subsp. pedemontanum 3879 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma serratum 163 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma confusum 8 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma confusum IBD1 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hedraianthifolium 132 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma hedraianthifolium 100 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. columnae 100 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. columnae Slo | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. scheuchzeri 11037 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. columnae 167 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. columnae 11041 | View | TCGAACCCTGCATAGCAGAACAACC-GCGA |
Phyteuma scheuchzeri subsp. columnae 171 |
View
Yikes!javax.el.ELException: Error reading [describedColumns] on type [org.cipres.treebase.domain.matrix.StandardMatrix] at javax.el.BeanELResolver.getValue(BeanELResolver.java:104) at org.apache.jasper.el.JasperELResolver.getValue(JasperELResolver.java:112) at org.apache.el.parser.AstValue.getValue(AstValue.java:168) at org.apache.el.ValueExpressionImpl.getValue(ValueExpressionImpl.java:189) at org.apache.jasper.runtime.PageContextImpl.proprietaryEvaluate(PageContextImpl.java:942) at org.apache.jsp.WEB_002dINF.pages.search.study.matrix_jsp._jspx_meth_c_005fset_005f5(matrix_jsp.java:1335) at org.apache.jsp.WEB_002dINF.pages.search.study.matrix_jsp._jspService(matrix_jsp.java:310) at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:70) at javax.servlet.http.HttpServlet.service(HttpServlet.java:583) at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:465) at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:383) at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:331) at javax.servlet.http.HttpServlet.service(HttpServlet.java:583) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:212) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:39) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:662) at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:428) at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:360) at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:297) at sun.reflect.GeneratedMethodAccessor317.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at net.bull.javamelody.JspWrapper.invoke(JspWrapper.java:152) at net.bull.javamelody.JdbcWrapper$DelegatingInvocationHandler.invoke(JdbcWrapper.java:294) at com.sun.proxy.$Proxy159.forward(Unknown Source) at org.springframework.web.servlet.view.InternalResourceView.renderMergedOutputModel(InternalResourceView.java:142) at org.springframework.web.servlet.view.AbstractView.render(AbstractView.java:239) at org.springframework.web.servlet.DispatcherServlet.render(DispatcherServlet.java:1142) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:879) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:792) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:476) at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:431) at javax.servlet.http.HttpServlet.service(HttpServlet.java:489) at javax.servlet.http.HttpServlet.service(HttpServlet.java:583) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:212) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:239) at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:215) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.tuckey.web.filters.urlrewrite.RuleChain.handleRewrite(RuleChain.java:164) at org.tuckey.web.filters.urlrewrite.RuleChain.doRules(RuleChain.java:141) at org.tuckey.web.filters.urlrewrite.UrlRewriter.processRequest(UrlRewriter.java:90) at org.tuckey.web.filters.urlrewrite.UrlRewriteFilter.doFilter(UrlRewriteFilter.java:406) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.displaytag.filter.ResponseOverrideFilter.doFilter(ResponseOverrideFilter.java:125) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:198) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:75) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:264) at org.acegisecurity.intercept.web.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:107) at org.acegisecurity.intercept.web.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:72) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.ui.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:110) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.wrapper.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:81) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.ui.AbstractProcessingFilter.doFilter(AbstractProcessingFilter.java:217) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.context.HttpSessionContextIntegrationFilter.doFilter(HttpSessionContextIntegrationFilter.java:191) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.util.FilterChainProxy.doFilter(FilterChainProxy.java:148) at org.acegisecurity.util.FilterToBeanProxy.doFilter(FilterToBeanProxy.java:90) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:199) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:168) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90) at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:483) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:130) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93) at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:679) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:346) at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:617) at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63) at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:934) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1690) at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52) at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191) at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659) at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:63) at java.lang.Thread.run(Thread.java:750) Caused by: org.hibernate.exception.GenericJDBCException: could not initialize a collection: [org.cipres.treebase.domain.matrix.CharacterMatrix.columns#15760] at org.hibernate.exception.SQLStateConverter.handledNonSpecificException(SQLStateConverter.java:103) at org.hibernate.exception.SQLStateConverter.convert(SQLStateConverter.java:91) at org.hibernate.exception.JDBCExceptionHelper.convert(JDBCExceptionHelper.java:43) at org.hibernate.loader.Loader.loadCollection(Loader.java:2001) at org.hibernate.loader.collection.BatchingCollectionInitializer.initialize(BatchingCollectionInitializer.java:52) at org.hibernate.persister.collection.AbstractCollectionPersister.initialize(AbstractCollectionPersister.java:565) at org.hibernate.event.def.DefaultInitializeCollectionEventListener.onInitializeCollection(DefaultInitializeCollectionEventListener.java:63) at org.hibernate.impl.SessionImpl.initializeCollection(SessionImpl.java:1716) at org.hibernate.collection.AbstractPersistentCollection.initialize(AbstractPersistentCollection.java:344) at org.hibernate.collection.AbstractPersistentCollection.read(AbstractPersistentCollection.java:86) at org.hibernate.collection.PersistentList.iterator(PersistentList.java:115) at java.util.Collections$UnmodifiableCollection$1. |