@ARTICLE{TreeBASE2Ref22531,
author = {William Quaedvlieg and Gerard J.M. Verkley and H. D. Shin and Robert W. Barreto and Acelino C Alfenas and W J Swart and Johannes (Ewald) Zacharias Groenewald and Pedro W. Crous},
title = {Sizing up Septoria},
year = {2013},
keywords = {},
doi = {10.3114/sim0017},
url = {http://studiesinmycology.org/},
pmid = {},
journal = {Studies in Mycology},
volume = {75},
number = {},
pages = {307--390},
abstract = {Septoria represents a genus of plant pathogenic fungi with a wide geographic distribution, commonly associated with leaf spots and stem cankers of a broad range of
plant hosts. A major aim of this study was to resolve the phylogenetic generic limits of Septoria, Stagonospora, and other related genera such as Sphaerulina, Phaeosphaeria and
Phaeoseptoria using sequences of the the partial 28S nuclear ribosomal RNA and RPB2 genes of a large set of isolates. Based on these results Septoria is shown to be a distinct
genus in the Mycosphaerellaceae, which has mycosphaerella-like sexual morphs. Several septoria-like species are now accommodated in Sphaerulina, a genus previously linked to
this complex. Phaeosphaeria (based on P. oryzae) is shown to be congeneric with Phaeoseptoria (based on P. papayae), which is reduced to synonymy under the former. Depazea
nodorum (causal agent of nodorum blotch of cereals) and Septoria avenae (causal agent of avenae blotch of barley and rye) are placed in a new genus, Parastagonospora, which
is shown to be distinct from Stagonospora (based on S. paludosa) and Phaeosphaeria. Partial nucleotide sequence data for fve gene loci, ITS, LSU, EF-1α, RPB2 and Btub were
generated for all of these isolates. A total of 47 clades or genera were resolved, leading to the introduction of 14 new genera, 36 new species, and 19 new combinations.}
}
Citation for Study 14898
Citation title:
"Sizing up Septoria".
Study name:
"Sizing up Septoria".
This study is part of submission 14898
(Status: Published).
Citation
Quaedvlieg W., Verkley G., Shin H., Barreto R., Alfenas A., Swart W.J., Groenewald J.Z., & Crous P.W. 2013. Sizing up Septoria. Studies in Mycology, 75: 307-390.
Authors
-
Quaedvlieg W.
(submitter)
0628052286
-
Verkley G.
-
Shin H.
-
Barreto R.
-
Alfenas A.
-
Swart W.J.
-
Groenewald J.Z.
+31302122600
-
Crous P.W.
Abstract
Septoria represents a genus of plant pathogenic fungi with a wide geographic distribution, commonly associated with leaf spots and stem cankers of a broad range of
plant hosts. A major aim of this study was to resolve the phylogenetic generic limits of Septoria, Stagonospora, and other related genera such as Sphaerulina, Phaeosphaeria and
Phaeoseptoria using sequences of the the partial 28S nuclear ribosomal RNA and RPB2 genes of a large set of isolates. Based on these results Septoria is shown to be a distinct
genus in the Mycosphaerellaceae, which has mycosphaerella-like sexual morphs. Several septoria-like species are now accommodated in Sphaerulina, a genus previously linked to
this complex. Phaeosphaeria (based on P. oryzae) is shown to be congeneric with Phaeoseptoria (based on P. papayae), which is reduced to synonymy under the former. Depazea
nodorum (causal agent of nodorum blotch of cereals) and Septoria avenae (causal agent of avenae blotch of barley and rye) are placed in a new genus, Parastagonospora, which
is shown to be distinct from Stagonospora (based on S. paludosa) and Phaeosphaeria. Partial nucleotide sequence data for fve gene loci, ITS, LSU, EF-1α, RPB2 and Btub were
generated for all of these isolates. A total of 47 clades or genera were resolved, leading to the introduction of 14 new genera, 36 new species, and 19 new combinations.
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S14898
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref22531,
author = {William Quaedvlieg and Gerard J.M. Verkley and H. D. Shin and Robert W. Barreto and Acelino C Alfenas and W J Swart and Johannes (Ewald) Zacharias Groenewald and Pedro W. Crous},
title = {Sizing up Septoria},
year = {2013},
keywords = {},
doi = {10.3114/sim0017},
url = {http://studiesinmycology.org/},
pmid = {},
journal = {Studies in Mycology},
volume = {75},
number = {},
pages = {307--390},
abstract = {Septoria represents a genus of plant pathogenic fungi with a wide geographic distribution, commonly associated with leaf spots and stem cankers of a broad range of
plant hosts. A major aim of this study was to resolve the phylogenetic generic limits of Septoria, Stagonospora, and other related genera such as Sphaerulina, Phaeosphaeria and
Phaeoseptoria using sequences of the the partial 28S nuclear ribosomal RNA and RPB2 genes of a large set of isolates. Based on these results Septoria is shown to be a distinct
genus in the Mycosphaerellaceae, which has mycosphaerella-like sexual morphs. Several septoria-like species are now accommodated in Sphaerulina, a genus previously linked to
this complex. Phaeosphaeria (based on P. oryzae) is shown to be congeneric with Phaeoseptoria (based on P. papayae), which is reduced to synonymy under the former. Depazea
nodorum (causal agent of nodorum blotch of cereals) and Septoria avenae (causal agent of avenae blotch of barley and rye) are placed in a new genus, Parastagonospora, which
is shown to be distinct from Stagonospora (based on S. paludosa) and Phaeosphaeria. Partial nucleotide sequence data for fve gene loci, ITS, LSU, EF-1α, RPB2 and Btub were
generated for all of these isolates. A total of 47 clades or genera were resolved, leading to the introduction of 14 new genera, 36 new species, and 19 new combinations.}
}
- Show RIS reference
TY - JOUR
ID - 22531
AU - Quaedvlieg,William
AU - Verkley,Gerard J.M.
AU - Shin,H. D.
AU - Barreto,Robert W.
AU - Alfenas,Acelino C
AU - Swart,W J
AU - Groenewald, Johannes (Ewald) Zacharias
AU - Crous,Pedro W.
T1 - Sizing up Septoria
PY - 2013
KW -
UR - http://studiesinmycology.org/
N2 - Septoria represents a genus of plant pathogenic fungi with a wide geographic distribution, commonly associated with leaf spots and stem cankers of a broad range of
plant hosts. A major aim of this study was to resolve the phylogenetic generic limits of Septoria, Stagonospora, and other related genera such as Sphaerulina, Phaeosphaeria and
Phaeoseptoria using sequences of the the partial 28S nuclear ribosomal RNA and RPB2 genes of a large set of isolates. Based on these results Septoria is shown to be a distinct
genus in the Mycosphaerellaceae, which has mycosphaerella-like sexual morphs. Several septoria-like species are now accommodated in Sphaerulina, a genus previously linked to
this complex. Phaeosphaeria (based on P. oryzae) is shown to be congeneric with Phaeoseptoria (based on P. papayae), which is reduced to synonymy under the former. Depazea
nodorum (causal agent of nodorum blotch of cereals) and Septoria avenae (causal agent of avenae blotch of barley and rye) are placed in a new genus, Parastagonospora, which
is shown to be distinct from Stagonospora (based on S. paludosa) and Phaeosphaeria. Partial nucleotide sequence data for fve gene loci, ITS, LSU, EF-1α, RPB2 and Btub were
generated for all of these isolates. A total of 47 clades or genera were resolved, leading to the introduction of 14 new genera, 36 new species, and 19 new combinations.
L3 - 10.3114/sim0017
JF - Studies in Mycology
VL - 75
IS -
SP - 307
EP - 390
ER -