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Citation for Study 17235

Citation title: "Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling".

Study name: "Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling".

This study is part of submission 17235 (Status: Published).

Citation

Floudas D., & Hibbett D.S. 2015. Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling. Fungal Biology , 46.

Authors

• Floudas D. (submitter) +46 722230088
• Hibbett D.S.

Abstract

We amplified RPB1, RPB2 and the ITS and LSU ribosomal genes from species mostly in the phlebioid clade, focusing heavily in phanerochaetoid taxa. We performed Maximum Likelihood and Bayesian analyses for different combinations of datasets. Our results provide a strongly supported phylogenetic picture of the phlebioid clade, representing 89 species in the four genes analyses, of which 49 represent phanerochaetoid taxa. Phanerochaete sensu lato is polyphyletic and distributed across nine lineages in the phlebioid clade. Six of these lineages are associated to already described genera, while we describe the new genus Phaeophlebiopsis to accommodate Phlebiopsis-like species in one of the remaining lineages. We also propose three taxonomic transfers and describe eight new species, with four of those species currently placed in Phanerochaete sanguinea or Phanerochaete velutina. Finally, the placement of Leptoporus mollis along with other potential brown-rot species in the phlebioid clade suggests that, in addition to the Antrodia clade, brown-rot may have evolved more than once in Polyporales.

Keywords

Phanerochaete, phlebioid clade, Polyporales, phylogeny, taxonomy, multi-marker analyses

External links

• DOI: 10.1016/j.funbio.2015.04.003

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S17235
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref24298,
  	 author = {Dimitrios  Floudas and David S Hibbett},
  	 title = {Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling},
  	 year = {2015},
  	 keywords = {Phanerochaete, phlebioid clade, Polyporales, phylogeny, taxonomy, multi-marker analyses},
  	 doi = {10.1016/j.funbio.2015.04.003},
  	 url = {http://},
  	 pmid = {},
  	 journal = {Fungal Biology },
  	 volume = {46},
  	 number = {},
  	 pages = {},
  	 abstract = {We amplified RPB1, RPB2 and the ITS and LSU ribosomal genes from species mostly in the phlebioid clade, focusing heavily in phanerochaetoid taxa. We performed Maximum Likelihood and Bayesian analyses for different combinations of datasets. Our results provide a strongly supported phylogenetic picture of the phlebioid clade, representing 89 species in the four genes analyses, of which 49 represent phanerochaetoid taxa. Phanerochaete sensu lato is polyphyletic and distributed across nine lineages in the phlebioid clade. Six of these lineages are associated to already described genera, while we describe the new genus Phaeophlebiopsis to accommodate Phlebiopsis-like species in one of the remaining lineages. We also propose three taxonomic transfers and describe eight new species, with four of those species currently placed in Phanerochaete sanguinea or Phanerochaete velutina. Finally, the placement of Leptoporus mollis along with other potential brown-rot species in the phlebioid clade suggests that, in addition to the Antrodia clade, brown-rot may have evolved more than once in Polyporales.}
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 24298
  AU  - Floudas,Dimitrios 
  AU  - Hibbett,David S
  T1  - Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling
  PY  - 2015
  KW  - Phanerochaete
  KW  - phlebioid clade
  KW  - Polyporales
  KW  - phylogeny
  KW  - taxonomy
  KW  - multi-marker analyses
  UR  - http://dx.doi.org/10.1016/j.funbio.2015.04.003
  N2  - We amplified RPB1, RPB2 and the ITS and LSU ribosomal genes from species mostly in the phlebioid clade, focusing heavily in phanerochaetoid taxa. We performed Maximum Likelihood and Bayesian analyses for different combinations of datasets. Our results provide a strongly supported phylogenetic picture of the phlebioid clade, representing 89 species in the four genes analyses, of which 49 represent phanerochaetoid taxa. Phanerochaete sensu lato is polyphyletic and distributed across nine lineages in the phlebioid clade. Six of these lineages are associated to already described genera, while we describe the new genus Phaeophlebiopsis to accommodate Phlebiopsis-like species in one of the remaining lineages. We also propose three taxonomic transfers and describe eight new species, with four of those species currently placed in Phanerochaete sanguinea or Phanerochaete velutina. Finally, the placement of Leptoporus mollis along with other potential brown-rot species in the phlebioid clade suggests that, in addition to the Antrodia clade, brown-rot may have evolved more than once in Polyporales.
  L3  - 10.1016/j.funbio.2015.04.003
  JF  - Fungal Biology 
  VL  - 46
  IS  - 
  ER  -