@ARTICLE{TreeBASE2Ref16152,
author = {Ann Kristin Knutsen and Mona Torp and Arne Holst-Jensen},
title = {Phylogenetic analyses of Fusarium species in the section Sporotrichiella based on partial sequences of the translation elongation factor-1 alpha gene},
year = {2003},
keywords = {},
doi = {10.1016/j.ijfoodmicro.2003.12.007},
url = {},
pmid = {},
journal = {International Journal of Food Microbiology},
volume = {95},
number = {3},
pages = {287--295},
abstract = {Phylogenetic relationships between four Fusarium species were studied using parts of the nuclear EF-1a-gene as a phylogenetic marker. Sequences from12 isolates of F. poae, 10 isolates of F. sporotrichioides and12 isolates of F. langsetiae yielded 4, 5 and 5 genotypes respectively. In addition we included one isolate of F. kyushuense. The aligned sequences were subjected to neighbor-joining, maximum parsimony and maximum likelihood analyses. The results from the different analyses were highly concordant due to a harmonic dataset. A likelihood test on all the topologies revealed that none of them could be rejected. All the analyses support the suggestion of F. langsethiae as a separate taxon in the Fusarium section Sporotrichiella. They also reveal that F. langsethiae is more related to F. sporotrichioides than to F. poae, and that F. kyushuense is more related to F. poae than to F. sporotrichioides although morphological characters could lead you to believe the opposite.}
}
Citation for Study 1968
Citation title:
"Phylogenetic analyses of Fusarium species in the section Sporotrichiella based on partial sequences of the translation elongation factor-1 alpha gene".
This study was previously identified under the legacy study ID S893
(Status: Published).
Citation
Knutsen A., Torp M., & Holst-jensen A. 2003. Phylogenetic analyses of Fusarium species in the section Sporotrichiella based on partial sequences of the translation elongation factor-1 alpha gene. International Journal of Food Microbiology, 95(3): 287-295.
Authors
-
Knutsen A.
-
Torp M.
-
Holst-jensen A.
Abstract
Phylogenetic relationships between four Fusarium species were studied using parts of the nuclear EF-1a-gene as a phylogenetic marker. Sequences from12 isolates of F. poae, 10 isolates of F. sporotrichioides and12 isolates of F. langsetiae yielded 4, 5 and 5 genotypes respectively. In addition we included one isolate of F. kyushuense. The aligned sequences were subjected to neighbor-joining, maximum parsimony and maximum likelihood analyses. The results from the different analyses were highly concordant due to a harmonic dataset. A likelihood test on all the topologies revealed that none of them could be rejected. All the analyses support the suggestion of F. langsethiae as a separate taxon in the Fusarium section Sporotrichiella. They also reveal that F. langsethiae is more related to F. sporotrichioides than to F. poae, and that F. kyushuense is more related to F. poae than to F. sporotrichioides although morphological characters could lead you to believe the opposite.
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- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S1968
- Other versions:
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- Show BibTeX reference
@ARTICLE{TreeBASE2Ref16152,
author = {Ann Kristin Knutsen and Mona Torp and Arne Holst-Jensen},
title = {Phylogenetic analyses of Fusarium species in the section Sporotrichiella based on partial sequences of the translation elongation factor-1 alpha gene},
year = {2003},
keywords = {},
doi = {10.1016/j.ijfoodmicro.2003.12.007},
url = {},
pmid = {},
journal = {International Journal of Food Microbiology},
volume = {95},
number = {3},
pages = {287--295},
abstract = {Phylogenetic relationships between four Fusarium species were studied using parts of the nuclear EF-1a-gene as a phylogenetic marker. Sequences from12 isolates of F. poae, 10 isolates of F. sporotrichioides and12 isolates of F. langsetiae yielded 4, 5 and 5 genotypes respectively. In addition we included one isolate of F. kyushuense. The aligned sequences were subjected to neighbor-joining, maximum parsimony and maximum likelihood analyses. The results from the different analyses were highly concordant due to a harmonic dataset. A likelihood test on all the topologies revealed that none of them could be rejected. All the analyses support the suggestion of F. langsethiae as a separate taxon in the Fusarium section Sporotrichiella. They also reveal that F. langsethiae is more related to F. sporotrichioides than to F. poae, and that F. kyushuense is more related to F. poae than to F. sporotrichioides although morphological characters could lead you to believe the opposite.}
}
- Show RIS reference
TY - JOUR
ID - 16152
AU - Knutsen,Ann Kristin
AU - Torp,Mona
AU - Holst-Jensen,Arne
T1 - Phylogenetic analyses of Fusarium species in the section Sporotrichiella based on partial sequences of the translation elongation factor-1 alpha gene
PY - 2003
KW -
UR -
N2 - Phylogenetic relationships between four Fusarium species were studied using parts of the nuclear EF-1a-gene as a phylogenetic marker. Sequences from12 isolates of F. poae, 10 isolates of F. sporotrichioides and12 isolates of F. langsetiae yielded 4, 5 and 5 genotypes respectively. In addition we included one isolate of F. kyushuense. The aligned sequences were subjected to neighbor-joining, maximum parsimony and maximum likelihood analyses. The results from the different analyses were highly concordant due to a harmonic dataset. A likelihood test on all the topologies revealed that none of them could be rejected. All the analyses support the suggestion of F. langsethiae as a separate taxon in the Fusarium section Sporotrichiella. They also reveal that F. langsethiae is more related to F. sporotrichioides than to F. poae, and that F. kyushuense is more related to F. poae than to F. sporotrichioides although morphological characters could lead you to believe the opposite.
L3 - 10.1016/j.ijfoodmicro.2003.12.007
JF - International Journal of Food Microbiology
VL - 95
IS - 3
SP - 287
EP - 295
ER -
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