@ARTICLE{TreeBASE2Ref28308,
author = {Rodolfo Salas-Lizana and Ryoko Oono},
title = { A comparative analysis of Lophodermium fissuratum sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes},
year = {2018},
keywords = {Leotiomycetes, Rhytismatales, phylogeny, ITS-LSU, ACT, new taxon},
doi = {10.1080/00275514.2018.1499991},
url = {http://},
pmid = {},
journal = {Mycologia},
volume = {110},
number = {5},
pages = {797--810},
abstract = {Lophodermium is a large fungal genus consisting of over 100 named species with ca. 38 of these commonly found as endophytes of pine needles. In this study, we use both morphological and sequencing data to describe a new Lophodermium species associated with haploxylon pines from the Pacific Northwest. This new species resembled the morphology of L. nitens, another commonly occurring species from the same geographic regions and host species. They both present dark subcuticular ascocarps without lips. However, the upper walls of their ascocarps are different, as the new species forms an inward v-shape folding, not present in L. nitens. Phylogenies using nuc rDNA internal transcribed spacer barcodes (ITS1-5.8S-ITS2 = ITS), partial D1-D2 domains of nuc rDNA 28S and partial sequences of the nuc actin gene confirmed that this species represents a unique lineage not closely related to L. nitens. We discuss the current state of the phylogeny in light of all currently available sequences from pine-associated Lophodermium species. }
}
Citation for Study 22507
Citation title:
" A comparative analysis of Lophodermium fissuratum sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes".
Study name:
" A comparative analysis of Lophodermium fissuratum sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes".
This study is part of submission 22507
(Status: Published).
Citation
Salas-lizana R., & Oono R. 2018. A comparative analysis of Lophodermium fissuratum sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes. Mycologia, 110(5): 797-810.
Authors
-
Salas-lizana R.
(submitter)
-
Oono R.
8058935064
Abstract
Lophodermium is a large fungal genus consisting of over 100 named species with ca. 38 of these commonly found as endophytes of pine needles. In this study, we use both morphological and sequencing data to describe a new Lophodermium species associated with haploxylon pines from the Pacific Northwest. This new species resembled the morphology of L. nitens, another commonly occurring species from the same geographic regions and host species. They both present dark subcuticular ascocarps without lips. However, the upper walls of their ascocarps are different, as the new species forms an inward v-shape folding, not present in L. nitens. Phylogenies using nuc rDNA internal transcribed spacer barcodes (ITS1-5.8S-ITS2 = ITS), partial D1-D2 domains of nuc rDNA 28S and partial sequences of the nuc actin gene confirmed that this species represents a unique lineage not closely related to L. nitens. We discuss the current state of the phylogeny in light of all currently available sequences from pine-associated Lophodermium species.
Keywords
Leotiomycetes, Rhytismatales, phylogeny, ITS-LSU, ACT, new taxon
External links
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- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S22507
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- Show BibTeX reference
@ARTICLE{TreeBASE2Ref28308,
author = {Rodolfo Salas-Lizana and Ryoko Oono},
title = { A comparative analysis of Lophodermium fissuratum sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes},
year = {2018},
keywords = {Leotiomycetes, Rhytismatales, phylogeny, ITS-LSU, ACT, new taxon},
doi = {10.1080/00275514.2018.1499991},
url = {http://},
pmid = {},
journal = {Mycologia},
volume = {110},
number = {5},
pages = {797--810},
abstract = {Lophodermium is a large fungal genus consisting of over 100 named species with ca. 38 of these commonly found as endophytes of pine needles. In this study, we use both morphological and sequencing data to describe a new Lophodermium species associated with haploxylon pines from the Pacific Northwest. This new species resembled the morphology of L. nitens, another commonly occurring species from the same geographic regions and host species. They both present dark subcuticular ascocarps without lips. However, the upper walls of their ascocarps are different, as the new species forms an inward v-shape folding, not present in L. nitens. Phylogenies using nuc rDNA internal transcribed spacer barcodes (ITS1-5.8S-ITS2 = ITS), partial D1-D2 domains of nuc rDNA 28S and partial sequences of the nuc actin gene confirmed that this species represents a unique lineage not closely related to L. nitens. We discuss the current state of the phylogeny in light of all currently available sequences from pine-associated Lophodermium species. }
}
- Show RIS reference
TY - JOUR
ID - 28308
AU - Salas-Lizana,Rodolfo
AU - Oono,Ryoko
T1 - A comparative analysis of Lophodermium fissuratum sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes
PY - 2018
KW - Leotiomycetes
KW - Rhytismatales
KW - phylogeny
KW - ITS-LSU
KW - ACT
KW - new taxon
UR - http://dx.doi.org/10.1080/00275514.2018.1499991
N2 - Lophodermium is a large fungal genus consisting of over 100 named species with ca. 38 of these commonly found as endophytes of pine needles. In this study, we use both morphological and sequencing data to describe a new Lophodermium species associated with haploxylon pines from the Pacific Northwest. This new species resembled the morphology of L. nitens, another commonly occurring species from the same geographic regions and host species. They both present dark subcuticular ascocarps without lips. However, the upper walls of their ascocarps are different, as the new species forms an inward v-shape folding, not present in L. nitens. Phylogenies using nuc rDNA internal transcribed spacer barcodes (ITS1-5.8S-ITS2 = ITS), partial D1-D2 domains of nuc rDNA 28S and partial sequences of the nuc actin gene confirmed that this species represents a unique lineage not closely related to L. nitens. We discuss the current state of the phylogeny in light of all currently available sequences from pine-associated Lophodermium species.
L3 - 10.1080/00275514.2018.1499991
JF - Mycologia
VL - 110
IS - 5
SP - 797
EP - 810
ER -
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