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Citation for Study 661

Citation title: "A comparison of Peronospora parasitica (downy mildew) isolates from Arabidopsis thaliana and Brassica oleracea using amplified fragment length polymorphism and fingerprint and internal transcribed spacer 1 sequence analyses.".

This study was previously identified under the legacy study ID S495 (Status: Published).

Citation

Rehmany A., Lynn J., Tr M., Holub E., & Beynon J. 2000. A comparison of Peronospora parasitica (downy mildew) isolates from Arabidopsis thaliana and Brassica oleracea using amplified fragment length polymorphism and fingerprint and internal transcribed spacer 1 sequence analyses. Fungal Genetics and Biology, 30(2): 95?103.

Authors

Rehmany A.
Lynn J.
Tr M.
Holub E.
Beynon J.

Abstract

Amplified fragment length polymorphism (AFLP) fingerprints and internal transcribed spacer 1 (ITS1) sequences from 27 Peronospora parasitica isolates (collected from Arabidopsis thaliana or Brassica oleracea), 5 Albugo candida isolates (from the same hosts and from Capsella bursa-pastoris), and 1 Bremia lactucae isolate (from Lactuca sativa) were compared. The AFLP analysis divided the isolates into five groups that correlated with taxonomic species and, in most cases, with host origin. The only exception was a group consisting of A. candida isolates from both B. oleracea and C. bursa-pastoris. ITS1 sequence analysis divided the isolates into the same five groups, demonstrated the divergence between P. parasitica isolates from A. thaliana and B. oleracea, and, using previously published ITS1 sequences, clearly showed the relationship between A. candida isolates from different hosts.

Keywords

phylogenetic tree; Peronosporales; oomycete

External links

DOI: 10.1006/fgbi.2000.1216

About this resource

Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S661
Other versions: Nexus NeXML

Show BibTeX reference

		@ARTICLE{TreeBASE2Ref17192,
	 author = {Anne P.  Rehmany and James R.  Lynn and M.  Tr and Eric B.  Holub and Jim L.  Beynon},
	 title = {A comparison of Peronospora parasitica (downy mildew) isolates from Arabidopsis thaliana and Brassica oleracea using amplified fragment length polymorphism and fingerprint and internal transcribed spacer 1 sequence analyses.},
	 year = {2000},
	 keywords = {phylogenetic tree; Peronosporales; oomycete},
	 doi = {10.1006/fgbi.2000.1216    },
	 url = {},
	 pmid = {},
	 journal = {Fungal Genetics and Biology},
	 volume = {30},
	 number = {2},
	 pages = {95?103},
	 abstract = {Amplified fragment length polymorphism (AFLP) fingerprints and internal transcribed spacer 1 (ITS1) sequences from 27 Peronospora parasitica isolates (collected from Arabidopsis thaliana or Brassica oleracea), 5 Albugo candida isolates (from the same hosts and from Capsella bursa-pastoris), and 1 Bremia lactucae isolate (from Lactuca sativa) were compared. The AFLP analysis divided the isolates into five groups that correlated with taxonomic species and, in most cases, with host origin. The only exception was a group consisting of A. candida isolates from both B. oleracea and C. bursa-pastoris. ITS1 sequence analysis divided the isolates into the same five groups, demonstrated the divergence between P. parasitica isolates from A. thaliana and B. oleracea, and, using previously published ITS1 sequences, clearly showed the relationship between A. candida isolates from different hosts. }
}

Show RIS reference

		TY  - JOUR
ID  - 17192
AU  - Rehmany,Anne P. 
AU  - Lynn,James R. 
AU  - Tr,M. 
AU  - Holub,Eric B. 
AU  - Beynon,Jim L. 
T1  - A comparison of Peronospora parasitica (downy mildew) isolates from Arabidopsis thaliana and Brassica oleracea using amplified fragment length polymorphism and fingerprint and internal transcribed spacer 1 sequence analyses.
PY  - 2000
KW  - phylogenetic tree; Peronosporales; oomycete
UR  - http://dx.doi.org/10.1006/fgbi.2000.1216    
N2  - Amplified fragment length polymorphism (AFLP) fingerprints and internal transcribed spacer 1 (ITS1) sequences from 27 Peronospora parasitica isolates (collected from Arabidopsis thaliana or Brassica oleracea), 5 Albugo candida isolates (from the same hosts and from Capsella bursa-pastoris), and 1 Bremia lactucae isolate (from Lactuca sativa) were compared. The AFLP analysis divided the isolates into five groups that correlated with taxonomic species and, in most cases, with host origin. The only exception was a group consisting of A. candida isolates from both B. oleracea and C. bursa-pastoris. ITS1 sequence analysis divided the isolates into the same five groups, demonstrated the divergence between P. parasitica isolates from A. thaliana and B. oleracea, and, using previously published ITS1 sequences, clearly showed the relationship between A. candida isolates from different hosts. 
L3  - 10.1006/fgbi.2000.1216    
JF  - Fungal Genetics and Biology
VL  - 30
IS  - 2
ER  -