@ARTICLE{TreeBASE2Ref24891,
author = {Lukasz Banasiak and Aneta Wojewodzka and Jakub Baczynski and Jean-Pierre Reduron and Marcin Piwczynski and Renata Kurzyna-Mlynik and Rafal Gutaker and Agnieszka Czarnocka-Cieciura and Sylwia Kosmala-Grzechnik and Krzysztof Spalik},
title = {Phylogeny of Apiaceae subtribe Daucinae and the taxonomic delineation of its genera},
year = {2016},
keywords = {cpDNA; Daucus; Laserpitieae; Laserpitium; nrDNA ITS; Scandiceae; taxonomy},
doi = {10.12705/653.8},
url = {http://},
pmid = {},
journal = {Taxon},
volume = {65},
number = {3},
pages = {563--585},
abstract = {Scandiceae subtribe Daucinae encompasses umbellifers that have fruits with prominent secondary ridges projecting
into wings (former tribe Laserpitieae) or spines (former tribe Caucalideae pro parte). It comprises several economically or
medicinally important genera including Cuminum, Daucus, Laser, Laserpitium and Thapsia among others. Recent molecular
studies, based mostly on nrDNA ITS sequences, revealed that neither Daucus nor Laserpitium are monophyletic. To address
issues of relationships and apply respective nomenclatural changes, we obtained additional ITS sequences as well as independent
data from three plastid markers?rps16 intron, rpoC1 intron and rpoB-trnC intergenic spacer?for a comprehensive
sample of the subtribe. We examined data for 260 accessions representing all genera of Daucinae and 81 of its ca. 93 species.
Phylogenetic trees were estimated using maximum likelihood and Bayesian inference methods. The results indicate that former
Laserpitieae constitute a paraphyletic grade at the base of the spiny-fruited members of Daucinae while traditionally delimited
Daucus and Laserpitium are polyphyletic. To maintain a monophyletic Daucus, we suggest including the following genera and
species into its synonymy: Agrocharis, Melanoselinum, Monizia, Pachyctenium, Pseudorlaya, Rouya, Tornabenea, Athamanta
dellacellae and Cryptotaenia elegans. The species of Laserpitium occur in seven clades and only six species of the Laserpitium
s.str. clade retain the generic name. Several species are transferred to Ekimia, Laser and Thapsia; additionally, a monospecific
genus Siler is restored and a new genus, Silphiodaucus, is established. The inclusion of Ammodaucus into Thapsia suggested
in an earlier study is not supported. The position of Laserpitium pseudomeum requires further study.}
}
Taxa for tree 93888 of Study 18012
Citation title:
"Phylogeny of Apiaceae subtribe Daucinae and the taxonomic delineation of its genera".
Study name:
"Phylogeny of Apiaceae subtribe Daucinae and the taxonomic delineation of its genera".
This study is part of submission 18012
(Status: Published).
Taxa
Return to complete tree view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
2185245 |
Agrocharis incognita 245 |
79154
|
5863472
|
2185298 |
Agrocharis incognita 46 |
79154
|
5863472
|
2185309 |
Agrocharis pedunculata 247 |
79156
|
5957459
|
2185271 |
Ammodaucus leucotrichus 12 |
79158
|
5416572
|
2185296 |
Anthriscus sylvestris 83 |
48027
|
2652870
|
2185275 |
Athamanta della cellae 435 |
|
|
2185237 |
Cryptotaenia elegans 39 |
386067
|
10502738
|
2185323 |
Cuminum cyminum 339 |
52462
|
2666477
|
2185319 |
Cuminum cyminum G7 |
52462
|
2666477
|
2185263 |
Cuminum setifolium 20 |
79163
|
5957460
|
2185280 |
Daucus arcanus 260 |
180806
|
5967636
|
2185274 |
Daucus aureus G18 |
79164
|
5832848
|
2185228 |
Daucus bicolor 41 |
79165
|
5832850
|
2185320 |
Daucus broteri 276 |
79166
|
5832856
|
2185244 |
Daucus broteri 277 |
79166
|
5832856
|
2185249 |
Daucus broteri 440 |
79166
|
5832856
|
2185489 |
Daucus carota azoricus 610 Daucus carota halophilus 9 |
|
|
2185494 |
Daucus carota carota 32 443 444 Daucus carota commutatus 3 |
|
|
2185226 |
Daucus carota carota G98 |
|
|
2185310 |
Daucus carota gadecaei 34 |
|
|
2185485 |
Daucus carota gummifer 445 Daucus carota hispanicus G30 |
|
|
2185326 |
Daucus carota maritimus 448 |
|
|
2185283 |
Daucus conchitae 236 |
180803
|
5967635
|
2185269 |
Daucus crinitus 14 |
79167
|
5832865
|
2185247 |
Daucus durieua 40 |
79168
|
5832867
|
2185257 |
Daucus durieua 453 |
79168
|
5832867
|
2185287 |
Daucus durieua G38 |
79168
|
5832867
|
2185315 |
Daucus glochidiatus 455 |
180807
|
5863497
|
2185302 |
Daucus glochidiatus 456 |
180807
|
5863497
|
2185486 |
Daucus guttatus 238 458 |
79165
|
5863499
|
2185240 |
Daucus involucratus 37 |
180804
|
5894278
|
2185492 |
Daucus involucratus 460 272 |
180804
|
5894278
|
2185261 |
Daucus littoralis 461 |
|
5862255
|
2185253 |
Daucus littoralis 8 |
|
5862255
|
2185301 |
Daucus mauritii G45 |
|
|
2185313 |
Daucus montanus 17 |
79169
|
3441199
|
2185252 |
Daucus muricatus 271 |
79170
|
5832884
|
2185322 |
Daucus muricatus 281 |
79170
|
5832884
|
2185454 |
Daucus muricatus G50 |
79170
|
5832884
|
2185429 |
Daucus muricatus G51 |
79170
|
5832884
|
2185491 |
Daucus pusillus 466 G53 |
79171
|
2652772
|
2185233 |
Daucus pusillus G52 |
79171
|
2652772
|
2185487 |
Daucus setifolius 237 G56 |
512624
|
3441200
|
2185223 |
Daucus setifolius 467 |
512624
|
3441200
|
2185259 |
Daucus syrticus 468 |
180799
|
5992458
|
2185292 |
Daucus tenuisectus 266 |
180800
|
5967633
|
2185236 |
Daucus virgatus 659 |
|
|
2185235 |
Ekimia bornmuelleri 655 |
|
|
2185317 |
Ferula communis 195 |
54829
|
1672346
|
2185324 |
Ferula olivacea 363 |
92053
|
5958700
|
2185258 |
Glaucosciadium cordifolium 221 |
371399
|
10503815
|
2185267 |
Glaucosciadium insigne 74 |
|
|
2185289 |
Laser trilobum 611 |
63011
|
5955818
|
2185256 |
Laser trilobum G61 |
63011
|
5955818
|
2185286 |
Laserpitium affine 480 |
|
8697701
|
2185305 |
Laserpitium archangelica 481 |
|
5944828
|
2185295 |
Laserpitium carduchorum 483 |
|
|
2185231 |
Laserpitium eliasii eliasii 484 |
|
|
2185242 |
Laserpitium eliasii ordunae 485 |
|
|
2185300 |
Laserpitium eliasii thalictrifolium 486 |
|
|
2185279 |
Laserpitium gallicum angustissimum 488 |
|
|
2185282 |
Laserpitium gallicum gallicum 487 |
|
|
2185268 |
Laserpitium gallicum orospedanum 489 |
|
|
2185299 |
Laserpitium gallicum paradoxum 490 |
|
|
2185312 |
Laserpitium hispidum 494 |
54718
|
5954972
|
2185264 |
Laserpitium krapfii gaudinii 497 |
|
|
2185311 |
Laserpitium krapfii krapfii 496 |
|
|
2185284 |
Laserpitium latifolium 498 |
48039
|
5889930
|
2185488 |
Laserpitium nestleri flabellatum 505 Laserpitium nestleri lainzii 506 |
|
|
2185314 |
Laserpitium nestleri nestleri 501 |
|
|
2185241 |
Laserpitium petrophilum 509 |
109128
|
5991518
|
2185325 |
Laserpitium prutenicum prutenicum 649 |
|
|
2185277 |
Laserpitium pseudomeum 513 |
|
5944861
|
2185262 |
Laserpitium siler 515 |
40869
|
5944863
|
2185306 |
Laserpitium siler 516 |
40869
|
5944863
|
2185318 |
Laserpitium siler 517 |
40869
|
5944863
|
2185251 |
Laserpitium siler G70 |
40869
|
5944863
|
2185243 |
Laserpitium stevenii 518 |
|
8697749
|
2185297 |
Leutea avicennae 67 |
|
|
2185493 |
Melanoselinum decipiens G72 G73 |
92057
|
5958702
|
2185490 |
Monizia edulis 13 G74 |
92059
|
5958703
|
2185254 |
Orlaya daucoides G75 |
79178
|
5863508
|
2185288 |
Orlaya grandiflora 258 |
40863
|
5846622
|
2185230 |
Polylophium panjutinii G82 |
63031
|
5955828
|
2185250 |
Rouya polygama 523 |
|
5945068
|
2185234 |
Thapsia garganica 525 |
79022
|
1673197
|
2185224 |
Thapsia garganica 526 |
79022
|
1673197
|
2185294 |
Thapsia garganica 527 |
79022
|
1673197
|
2185281 |
Thapsia gummifera 520 |
|
|
2185285 |
Thapsia meoides 473 |
|
|
2185238 |
Thapsia scabra 479 |
|
|
2185327 |
Thapsia sp 471 |
|
|
2185303 |
Thapsia tenuifolia 469 |
|
8693257
|
2185304 |
Thapsia thapsioides 477 |
|
|
2185273 |
Thapsia thapsioides 478 |
|
|
2185265 |
Thapsia transtagana 524 |
512634
|
10507595
|
2185321 |
Thapsia villosa dissecta 528 |
|
|
2185316 |
Tornabenea annua 521 |
386045
|
10507737
|