@ARTICLE{TreeBASE2Ref14900,
author = {Gustavo Caetano-Anoll?s and D. Caetano-Anoll?s},
title = {An evolutionarily structured universe of protein architecture.},
year = {2003},
keywords = {},
doi = {10.1101/gr.1161903},
url = {},
pmid = {12840035 },
journal = {Genome Research},
volume = {13},
number = {7},
pages = {1563--1571},
abstract = {Protein structural diversity encompasses a finite set of architectural designs. Embedded in these topologies are evolutionary histories that we here uncover using cladistic principles and measurements of protein-fold usage and sharing. The reconstructed phylogenies are inherently rooted and depict histories of protein and proteome diversification. Proteome phylogenies showed two monophyletic sister-groups delimiting Bacteria and Archaea, and a topology rooted in Eucarya. This suggests three dramatic evolutionary events and a common ancestor with a eukaryotic-like, gene-rich, and relatively modern organization. Conversely, a general phylogeny of protein architectures showed that structural classes of globular proteins appeared early in evolution and in defined order, the alpha/beta class being the first. While most ancestral folds shared a common architecture of barrels or interleaved beta-sheets and alpha-helices, many were clearly derived, such as polyhedral folds in the all-alpha class and beta-sandwiches, beta-propellers, and beta-prisms in all-beta proteins. We also describe transformation pathways of architectures that are prevalently used in nature. For example, beta-barrels with increased curl and stagger were favored evolutionary outcomes in the all-beta class. Interestingly, we found cases where structural change followed the alpha-to-beta tendency uncovered in the tree of architectures. We finally traced the total number of enzymatic functions associated with folds in the trees and showed there was a general link between structure and enzymatic function.}
}
Taxa for Study 1018

Citation title:
"An evolutionarily structured universe of protein architecture.".

This study was previously identified under the legacy study ID S909
(Status: Published).
Taxa
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 234875 |
Aeropyrum pernix |
56636
|
2553800
|
| 234987 |
Aquifex aeolicus |
224324
|
5326010
|
| 235238 |
Arabidopsis thaliana |
3702
|
2774350
|
| 235392 |
Archaeoglobus fulgidus |
224325
|
5325437
|
| 235012 |
Bacillus subtilis |
1423
|
229777
|
| 235297 |
Borrelia burgdorferi |
139
|
2554496
|
| 235081 |
Caenorhabditis elegans |
6239
|
497404
|
| 235292 |
Chlamydia pneumoniae |
91614
|
3865819
|
| 235054 |
Clostridium acetobutylicum |
1488
|
2554916
|
| 8705 |
Deinococcus radiodurans |
1299
|
2555272
|
| 235191 |
Drosophila melanogaster |
7227
|
2614985
|
| 235330 |
Escherichia coli |
562
|
2555646
|
| 11323 |
Haemophilus influenzae |
727
|
2555998
|
| 15043 |
Halobacterium sp |
2239
|
2556045
|
| 234958 |
Helicobacter pylori |
210
|
2556161
|
| 235308 |
Methanobacterium thermoautotrophicum |
145262
|
2833378
|
| 235328 |
Methanococcus jannaschii |
243232
|
5325698
|
| 234906 |
Mycobacterium tuberculosis |
1773
|
3865940
|
| 15048 |
Mycoplasma genitalium |
2097
|
2557196
|
| 15049 |
Mycoplasma pneumoniae |
2104
|
2557240
|
| 234870 |
Neurospora crassa |
5141
|
3153358
|
| 235344 |
Pyrococcus horikoshii |
53953
|
2558179
|
| 235222 |
Rickettsia prowazekii |
782
|
3866003
|
| 15585 |
SCOP 1.59 a.1.1 |
|
|
| 15213 |
SCOP 1.59 a.100.1 |
|
|
| 15068 |
SCOP 1.59 a.101.1 |
|
|
| 15300 |
SCOP 1.59 a.102 |
|
|
| 15590 |
SCOP 1.59 a.103.1 |
|
|
| 15436 |
SCOP 1.59 a.104.1 |
|
|
| 15587 |
SCOP 1.59 a.105 |
|
|
| 15226 |
SCOP 1.59 a.107.1 |
|
|
| 15155 |
SCOP 1.59 a.108 |
|
|
| 15446 |
SCOP 1.59 a.109.1 |
|
|
| 15404 |
SCOP 1.59 a.11 |
|
|
| 15306 |
SCOP 1.59 a.110.1 |
|
|
| 15177 |
SCOP 1.59 a.111 |
|
|
| 15559 |
SCOP 1.59 a.112 |
|
|
| 15495 |
SCOP 1.59 a.113.1 |
|
|
| 15393 |
SCOP 1.59 a.114.1 |
|
|
| 15302 |
SCOP 1.59 a.115.1 |
|
|
| 15513 |
SCOP 1.59 a.116.1 |
|
|
| 15130 |
SCOP 1.59 a.117.1 |
|
|
| 15167 |
SCOP 1.59 a.118 |
|
|
| 15527 |
SCOP 1.59 a.119.1 |
|
|
| 15578 |
SCOP 1.59 a.12.1 |
|
|
| 15127 |
SCOP 1.59 a.121.1 |
|
|
| 15504 |
SCOP 1.59 a.122.1 |
|
|
| 15193 |
SCOP 1.59 a.123.1 |
|
|
| 15263 |
SCOP 1.59 a.124.1 |
|
|
| 15119 |
SCOP 1.59 a.125.1 |
|
|
| 15441 |
SCOP 1.59 a.127.1 |
|
|
| 15154 |
SCOP 1.59 a.128.1 |
|
|
| 15261 |
SCOP 1.59 a.129.1 |
|
|
| 15189 |
SCOP 1.59 a.13.1 |
|
|
| 15409 |
SCOP 1.59 a.130.1 |
|
|
| 15546 |
SCOP 1.59 a.132.1 |
|
|
| 15410 |
SCOP 1.59 a.133.1 |
|
|
| 15265 |
SCOP 1.59 a.137 |
|
|
| 15499 |
SCOP 1.59 a.138.1 |
|
|
| 15359 |
SCOP 1.59 a.14.1 |
|
|
| 15175 |
SCOP 1.59 a.15.1 |
|
|
| 15138 |
SCOP 1.59 a.16.1 |
|
|
| 15472 |
SCOP 1.59 a.19.1 |
|
|
| 15178 |
SCOP 1.59 a.2 |
|
|
| 15051 |
SCOP 1.59 a.20 |
|
|
| 15457 |
SCOP 1.59 a.21.1 |
|
|
| 15574 |
SCOP 1.59 a.22.1 |
|
|
| 15528 |
SCOP 1.59 a.23 |
|
|
| 15473 |
SCOP 1.59 a.24 |
|
|
| 15277 |
SCOP 1.59 a.25.1 |
|
|
| 15482 |
SCOP 1.59 a.26.1 |
|
|
| 15460 |
SCOP 1.59 a.27.1 |
|
|
| 15599 |
SCOP 1.59 a.28.1 |
|
|
| 15601 |
SCOP 1.59 a.29 |
|
|
| 15560 |
SCOP 1.59 a.3.1 |
|
|
| 15402 |
SCOP 1.59 a.30 |
|
|
| 15291 |
SCOP 1.59 a.31.1 |
|
|
| 15097 |
SCOP 1.59 a.32.1 |
|
|
| 15334 |
SCOP 1.59 a.34.1 |
|
|
| 15396 |
SCOP 1.59 a.35.1 |
|
|
| 15465 |
SCOP 1.59 a.36.1 |
|
|
| 15092 |
SCOP 1.59 a.37.1 |
|
|
| 15537 |
SCOP 1.59 a.38.1 |
|
|
| 15547 |
SCOP 1.59 a.39 |
|
|
| 15591 |
SCOP 1.59 a.4 |
|
|
| 15173 |
SCOP 1.59 a.40.1 |
|
|
| 15091 |
SCOP 1.59 a.41.1 |
|
|
| 15507 |
SCOP 1.59 a.43.1 |
|
|
| 15382 |
SCOP 1.59 a.44.1 |
|
|
| 15474 |
SCOP 1.59 a.45.1 |
|
|
| 15307 |
SCOP 1.59 a.46 |
|
|
| 15159 |
SCOP 1.59 a.47 |
|
|
| 15313 |
SCOP 1.59 a.48 |
|
|
| 15326 |
SCOP 1.59 a.5 |
|
|
| 15095 |
SCOP 1.59 a.50.1 |
|
|
| 15236 |
SCOP 1.59 a.51.1 |
|
|
| 15320 |
SCOP 1.59 a.52.1 |
|
|
| 15258 |
SCOP 1.59 a.54.1 |
|
|
| 15445 |
SCOP 1.59 a.55.1 |
|
|
| 15567 |
SCOP 1.59 a.56.1 |
|
|
| 15241 |
SCOP 1.59 a.57.1 |
|
|
| 15295 |
SCOP 1.59 a.58.1 |
|
|
| 15194 |
SCOP 1.59 a.59.1 |
|
|
| 15056 |
SCOP 1.59 a.6.1 |
|
|
| 15342 |
SCOP 1.59 a.60 |
|
|
| 15144 |
SCOP 1.59 a.63.1 |
|
|
| 15353 |
SCOP 1.59 a.64.1 |
|
|
| 15156 |
SCOP 1.59 a.65.1 |
|
|
| 15529 |
SCOP 1.59 a.66.1 |
|
|
| 15073 |
SCOP 1.59 a.68.1 |
|
|
| 15101 |
SCOP 1.59 a.69.1 |
|
|
| 15151 |
SCOP 1.59 a.7 |
|
|
| 15180 |
SCOP 1.59 a.70.1 |
|
|
| 15183 |
SCOP 1.59 a.71.1 |
|
|
| 15561 |
SCOP 1.59 a.72.1 |
|
|
| 15122 |
SCOP 1.59 a.73.1 |
|
|
| 15426 |
SCOP 1.59 a.74.1 |
|
|
| 15230 |
SCOP 1.59 a.75.1 |
|
|
| 15079 |
SCOP 1.59 a.76.1 |
|
|
| 15509 |
SCOP 1.59 a.77.1 |
|
|
| 15600 |
SCOP 1.59 a.78.1 |
|
|
| 15252 |
SCOP 1.59 a.79.1 |
|
|
| 15157 |
SCOP 1.59 a.8.1 |
|
|
| 15335 |
SCOP 1.59 a.80.1 |
|
|
| 15417 |
SCOP 1.59 a.81.1 |
|
|
| 15492 |
SCOP 1.59 a.82.1 |
|
|
| 15084 |
SCOP 1.59 a.83.1 |
|
|
| 15072 |
SCOP 1.59 a.84.1 |
|
|
| 15548 |
SCOP 1.59 a.85.1 |
|
|
| 15314 |
SCOP 1.59 a.86.1 |
|
|
| 15052 |
SCOP 1.59 a.87.1 |
|
|
| 15292 |
SCOP 1.59 a.89.1 |
|
|
| 15215 |
SCOP 1.59 a.9.1 |
|
|
| 15532 |
SCOP 1.59 a.91.1 |
|
|
| 15375 |
SCOP 1.59 a.92.1 |
|
|
| 15166 |
SCOP 1.59 a.93.1 |
|
|
| 15304 |
SCOP 1.59 a.94.1 |
|
|
| 15503 |
SCOP 1.59 a.95.1 |
|
|
| 15190 |
SCOP 1.59 a.96.1 |
|
|
| 15518 |
SCOP 1.59 a.97.1 |
|
|
| 15579 |
SCOP 1.59 a.98.1 |
|
|
| 15424 |
SCOP 1.59 a.99.1 |
|
|
| 15254 |
SCOP 1.59 b.1 |
|
|
| 15162 |
SCOP 1.59 b.10.1 |
|
|
| 15562 |
SCOP 1.59 b.11.1 |
|
|
| 15164 |
SCOP 1.59 b.12.1 |
|
|
| 15429 |
SCOP 1.59 b.13.x |
|
|
| 15498 |
SCOP 1.59 b.14.1 |
|
|
| 15522 |
SCOP 1.59 b.15.1 |
|
|
| 15491 |
SCOP 1.59 b.16.1 |
|
|
| 15438 |
SCOP 1.59 b.17.1 |
|
|
| 15448 |
SCOP 1.59 b.18.1 |
|
|
| 15325 |
SCOP 1.59 b.19.1 |
|
|
| 15184 |
SCOP 1.59 b.2 |
|
|
| 15573 |
SCOP 1.59 b.21.1 |
|
|
| 15247 |
SCOP 1.59 b.22.1 |
|
|
| 15128 |
SCOP 1.59 b.23.1 |
|
|
| 15525 |
SCOP 1.59 b.24.1 |
|
|
| 15195 |
SCOP 1.59 b.25 |
|
|
| 15418 |
SCOP 1.59 b.26.1 |
|
|
| 15080 |
SCOP 1.59 b.27.1 |
|
|
| 15058 |
SCOP 1.59 b.29.1 |
|
|
| 15227 |
SCOP 1.59 b.3 |
|
|
| 15267 |
SCOP 1.59 b.30 |
|
|
| 15081 |
SCOP 1.59 b.33.1 |
|
|
| 15349 |
SCOP 1.59 b.34 |
|
|
| 15093 |
SCOP 1.59 b.35 |
|
|
| 15378 |
SCOP 1.59 b.36.1 |
|
|
| 15406 |
SCOP 1.59 b.37.1 |
|
|
| 15294 |
SCOP 1.59 b.38.1 |
|
|
| 15394 |
SCOP 1.59 b.39.1 |
|
|
| 15416 |
SCOP 1.59 b.4.1 |
|
|
| 15430 |
SCOP 1.59 b.40 |
|
|
| 15471 |
SCOP 1.59 b.41.1 |
|
|
| 15510 |
SCOP 1.59 b.42 |
|
|
| 15403 |
SCOP 1.59 b.43 |
|
|
| 15534 |
SCOP 1.59 b.44.1 |
|
|
| 15514 |
SCOP 1.59 b.45.1 |
|
|
| 15160 |
SCOP 1.59 b.46.1 |
|
|
| 15224 |
SCOP 1.59 b.47.1 |
|
|
| 15329 |
SCOP 1.59 b.48.1 |
|
|
| 15171 |
SCOP 1.59 b.49 |
|
|
| 15455 |
SCOP 1.59 b.50.1 |
|
|
| 15486 |
SCOP 1.59 b.51.1 |
|
|
| 15452 |
SCOP 1.59 b.52 |
|
|
| 15502 |
SCOP 1.59 b.53.1 |
|
|
| 15197 |
SCOP 1.59 b.54.1 |
|
|
| 15085 |
SCOP 1.59 b.55.1 |
|
|
| 15588 |
SCOP 1.59 b.56.1 |
|
|
| 15102 |
SCOP 1.59 b.58.1 |
|
|
| 15207 |
SCOP 1.59 b.6.1 |
|
|
| 15408 |
SCOP 1.59 b.60.1 |
|
|
| 15328 |
SCOP 1.59 b.62.1 |
|
|
| 15508 |
SCOP 1.59 b.63.1 |
|
|
| 15540 |
SCOP 1.59 b.64.1 |
|
|
| 15147 |
SCOP 1.59 b.66.1 |
|
|
| 15463 |
SCOP 1.59 b.68 |
|
|
| 15397 |
SCOP 1.59 b.69 |
|
|
| 15531 |
SCOP 1.59 b.7.1 |
|
|
| 15554 |
SCOP 1.59 b.70 |
|
|
| 15067 |
SCOP 1.59 b.71.1 |
|
|
| 15357 |
SCOP 1.59 b.72 |
|
|
| 15346 |
SCOP 1.59 b.73.1 |
|
|
| 15549 |
SCOP 1.59 b.74.1 |
|
|
| 15279 |
SCOP 1.59 b.75.1 |
|
|
| 15373 |
SCOP 1.59 b.77.1 |
|
|
| 15385 |
SCOP 1.59 b.78.1 |
|
|
| 15232 |
SCOP 1.59 b.79.1 |
|
|
| 15201 |
SCOP 1.59 b.8.1 |
|
|
| 15126 |
SCOP 1.59 b.80 |
|
|
| 15176 |
SCOP 1.59 b.81 |
|
|
| 15454 |
SCOP 1.59 b.82 |
|
|
| 15198 |
SCOP 1.59 b.84 |
|
|
| 15450 |
SCOP 1.59 b.85 |
|
|
| 15536 |
SCOP 1.59 b.86.1 |
|
|
| 15196 |
SCOP 1.59 b.87.1 |
|
|
| 15203 |
SCOP 1.59 b.88.1 |
|
|
| 15137 |
SCOP 1.59 b.89.1 |
|
|
| 15112 |
SCOP 1.59 b.92.1 |
|
|
| 15211 |
SCOP 1.59 b.93.1 |
|
|
| 15255 |
SCOP 1.59 c.1 |
|
|
| 15116 |
SCOP 1.59 c.10 |
|
|
| 15094 |
SCOP 1.59 c.108.1 |
|
|
| 15107 |
SCOP 1.59 c.11 |
|
|
| 15209 |
SCOP 1.59 c.12 |
|
|
| 15519 |
SCOP 1.59 c.13 |
|
|
| 15333 |
SCOP 1.59 c.14.1 |
|
|
| 15462 |
SCOP 1.59 c.15.1 |
|
|
| 15208 |
SCOP 1.59 c.16.1 |
|
|
| 15399 |
SCOP 1.59 c.17.1 |
|
|
| 15497 |
SCOP 1.59 c.18.1 |
|
|
| 15485 |
SCOP 1.59 c.19.1 |
|
|
| 15235 |
SCOP 1.59 c.2.1 |
|
|
| 15539 |
SCOP 1.59 c.20.1 |
|
|
| 15305 |
SCOP 1.59 c.21.1 |
|
|
| 15293 |
SCOP 1.59 c.22.1 |
|
|
| 15237 |
SCOP 1.59 c.23 |
|
|
| 15447 |
SCOP 1.59 c.24.1 |
|
|
| 15517 |
SCOP 1.59 c.25.1 |
|
|
| 15234 |
SCOP 1.59 c.26 |
|
|
| 15274 |
SCOP 1.59 c.27.1 |
|
|
| 15223 |
SCOP 1.59 c.28.1 |
|
|
| 15323 |
SCOP 1.59 c.29.1 |
|
|
| 15185 |
SCOP 1.59 c.3.1 |
|
|
| 15521 |
SCOP 1.59 c.30.1 |
|
|
| 15311 |
SCOP 1.59 c.31.1 |
|
|
| 15339 |
SCOP 1.59 c.32.1 |
|
|
| 15262 |
SCOP 1.59 c.33.1 |
|
|
| 15139 |
SCOP 1.59 c.34.1 |
|
|
| 15526 |
SCOP 1.59 c.35.1 |
|
|
| 15161 |
SCOP 1.59 c.36.1 |
|
|
| 15421 |
SCOP 1.59 c.37.1 |
|
|
| 15238 |
SCOP 1.59 c.38.1 |
|
|
| 15118 |
SCOP 1.59 c.39.1 |
|
|
| 15331 |
SCOP 1.59 c.4.1 |
|
|
| 15563 |
SCOP 1.59 c.40.1 |
|
|
| 15106 |
SCOP 1.59 c.41.1 |
|
|
| 15568 |
SCOP 1.59 c.42.1 |
|
|
| 15202 |
SCOP 1.59 c.43.1 |
|
|
| 15571 |
SCOP 1.59 c.44 |
|
|
| 15506 |
SCOP 1.59 c.45.1 |
|
|
| 15324 |
SCOP 1.59 c.46.1 |
|
|
| 15242 |
SCOP 1.59 c.47 |
|
|
| 15366 |
SCOP 1.59 c.48.1 |
|
|
| 15594 |
SCOP 1.59 c.49 |
|
|
| 15392 |
SCOP 1.59 c.5.1 |
|
|
| 15206 |
SCOP 1.59 c.50.1 |
|
|
| 15308 |
SCOP 1.59 c.51 |
|
|
| 15218 |
SCOP 1.59 c.52 |
|
|
| 15210 |
SCOP 1.59 c.52.2 |
|
|
| 15309 |
SCOP 1.59 c.52.3 |
|
|
| 15233 |
SCOP 1.59 c.53 |
|
|
| 15398 |
SCOP 1.59 c.54.1 |
|
|
| 15169 |
SCOP 1.59 c.55 |
|
|
| 15543 |
SCOP 1.59 c.56 |
|
|
| 15538 |
SCOP 1.59 c.57.1 |
|
|
| 15074 |
SCOP 1.59 c.58.1 |
|
|
| 15270 |
SCOP 1.59 c.59.1 |
|
|
| 15343 |
SCOP 1.59 c.6.1 |
|
|
| 15152 |
SCOP 1.59 c.60.1 |
|
|
| 15350 |
SCOP 1.59 c.61.1 |
|
|
| 15381 |
SCOP 1.59 c.62.1 |
|
|
| 15075 |
SCOP 1.59 c.63.1 |
|
|
| 15348 |
SCOP 1.59 c.64.1 |
|
|
| 15413 |
SCOP 1.59 c.65.1 |
|
|
| 15205 |
SCOP 1.59 c.66.1 |
|
|
| 15257 |
SCOP 1.59 c.67.1 |
|
|
| 15273 |
SCOP 1.59 c.68.1 |
|
|
| 15484 |
SCOP 1.59 c.69.1 |
|
|
| 15542 |
SCOP 1.59 c.7.1 |
|
|
| 15059 |
SCOP 1.59 c.70.1 |
|
|
| 15114 |
SCOP 1.59 c.71.1 |
|
|
| 15098 |
SCOP 1.59 c.72 |
|
|
| 15487 |
SCOP 1.59 c.73.1 |
|
|
| 15100 |
SCOP 1.59 c.74.1 |
|
|
| 15580 |
SCOP 1.59 c.75.1 |
|
|
| 15443 |
SCOP 1.59 c.76.1 |
|
|
| 15141 |
SCOP 1.59 c.77.1 |
|
|
| 15352 |
SCOP 1.59 c.78 |
|
|
| 15372 |
SCOP 1.59 c.79.1 |
|
|
| 15256 |
SCOP 1.59 c.8 |
|
|
| 15371 |
SCOP 1.59 c.80.1 |
|
|
| 15558 |
SCOP 1.59 c.81.1 |
|
|
| 15289 |
SCOP 1.59 c.82.1 |
|
|
| 15451 |
SCOP 1.59 c.83.1 |
|
|
| 15150 |
SCOP 1.59 c.84.1 |
|
|
| 15221 |
SCOP 1.59 c.85.1 |
|
|
| 15132 |
SCOP 1.59 c.86.1 |
|
|
| 15423 |
SCOP 1.59 c.87.1 |
|
|
| 15186 |
SCOP 1.59 c.88.1 |
|
|
| 15337 |
SCOP 1.59 c.89.1 |
|
|
| 15405 |
SCOP 1.59 c.9 |
|
|
| 15105 |
SCOP 1.59 c.90.1 |
|
|
| 15070 |
SCOP 1.59 c.91.1 |
|
|
| 15090 |
SCOP 1.59 c.92 |
|
|
| 15530 |
SCOP 1.59 c.93.1 |
|
|
| 15299 |
SCOP 1.59 c.94.1 |
|
|
| 15204 |
SCOP 1.59 c.95.1 |
|
|
| 15598 |
SCOP 1.59 c.96.1 |
|
|
| 15364 |
SCOP 1.59 c.97 |
|
|
| 15285 |
SCOP 1.59 d.1.1 |
|
|
| 15437 |
SCOP 1.59 d.10.1 |
|
|
| 15170 |
SCOP 1.59 d.100.1 |
|
|
| 15153 |
SCOP 1.59 d.101.1 |
|
|
| 15113 |
SCOP 1.59 d.102.1 |
|
|
| 15569 |
SCOP 1.59 d.103.1 |
|
|
| 15322 |
SCOP 1.59 d.104.1 |
|
|
| 15108 |
SCOP 1.59 d.105.1 |
|
|
| 15414 |
SCOP 1.59 d.106.1 |
|
|
| 15453 |
SCOP 1.59 d.107.1 |
|
|
| 15298 |
SCOP 1.59 d.108.1 |
|
|
| 15501 |
SCOP 1.59 d.109.1 |
|
|
| 15420 |
SCOP 1.59 d.11.1 |
|
|
| 15363 |
SCOP 1.59 d.110 |
|
|
| 15111 |
SCOP 1.59 d.111.1 |
|
|
| 15576 |
SCOP 1.59 d.112.1 |
|
|
| 15146 |
SCOP 1.59 d.113.1 |
|
|
| 15589 |
SCOP 1.59 d.114.1 |
|
|
| 15109 |
SCOP 1.59 d.115.1 |
|
|
| 15341 |
SCOP 1.59 d.116.1 |
|
|
| 15411 |
SCOP 1.59 d.117.1 |
|
|
| 15412 |
SCOP 1.59 d.118.1 |
|
|
| 15065 |
SCOP 1.59 d.12.1 |
|
|
| 15597 |
SCOP 1.59 d.120.1 |
|
|
| 15354 |
SCOP 1.59 d.122.1 |
|
|
| 15131 |
SCOP 1.59 d.123.1 |
|
|
| 15288 |
SCOP 1.59 d.124.1 |
|
|
| 15376 |
SCOP 1.59 d.125.1 |
|
|
| 15188 |
SCOP 1.59 d.126.1 |
|
|
| 15217 |
SCOP 1.59 d.127.1 |
|
|
| 15136 |
SCOP 1.59 d.128.1 |
|
|
| 15317 |
SCOP 1.59 d.129 |
|
|
| 15191 |
SCOP 1.59 d.13.1 |
|
|
| 15407 |
SCOP 1.59 d.130.1 |
|
|
| 15053 |
SCOP 1.59 d.131.1 |
|
|
| 15290 |
SCOP 1.59 d.132.1 |
|
|
| 15260 |
SCOP 1.59 d.133.1 |
|
|
| 15581 |
SCOP 1.59 d.134.1 |
|
|
| 15544 |
SCOP 1.59 d.135.1 |
|
|
| 15316 |
SCOP 1.59 d.136.1 |
|
|
| 15456 |
SCOP 1.59 d.137.1 |
|
|
| 15449 |
SCOP 1.59 d.138.1 |
|
|
| 15069 |
SCOP 1.59 d.139.1 |
|
|
| 15383 |
SCOP 1.59 d.14.1 |
|
|
| 15214 |
SCOP 1.59 d.140.1 |
|
|
| 15422 |
SCOP 1.59 d.141.1 |
|
|
| 15089 |
SCOP 1.59 d.142 |
|
|
| 15583 |
SCOP 1.59 d.143.1 |
|
|
| 15370 |
SCOP 1.59 d.144.1 |
|
|
| 15259 |
SCOP 1.59 d.145.1 |
|
|
| 15281 |
SCOP 1.59 d.146.1 |
|
|
| 15467 |
SCOP 1.59 d.147.1 |
|
|
| 15565 |
SCOP 1.59 d.148.1 |
|
|
| 15440 |
SCOP 1.59 d.15 |
|
|
| 15219 |
SCOP 1.59 d.150.1 |
|
|
| 15356 |
SCOP 1.59 d.151.1 |
|
|
| 15062 |
SCOP 1.59 d.152.1 |
|
|
| 15351 |
SCOP 1.59 d.153.1 |
|
|
| 15319 |
SCOP 1.59 d.154.1 |
|
|
| 15158 |
SCOP 1.59 d.156.1 |
|
|
| 15172 |
SCOP 1.59 d.157.1 |
|
|
| 15248 |
SCOP 1.59 d.158.1 |
|
|
| 15129 |
SCOP 1.59 d.159.1 |
|
|
| 15480 |
SCOP 1.59 d.16.1 |
|
|
| 15268 |
SCOP 1.59 d.160.1 |
|
|
| 15433 |
SCOP 1.59 d.161.1 |
|
|
| 15368 |
SCOP 1.59 d.162.1 |
|
|
| 15220 |
SCOP 1.59 d.163.1 |
|
|
| 15063 |
SCOP 1.59 d.164.1 |
|
|
| 15082 |
SCOP 1.59 d.165.1 |
|
|
| 15187 |
SCOP 1.59 d.166.1 |
|
|
| 15140 |
SCOP 1.59 d.167.1 |
|
|
| 15125 |
SCOP 1.59 d.168.1 |
|
|
| 15520 |
SCOP 1.59 d.169.1 |
|
|
| 15199 |
SCOP 1.59 d.17 |
|
|
| 15264 |
SCOP 1.59 d.170 |
|
|
| 15400 |
SCOP 1.59 d.171.1 |
|
|
| 15275 |
SCOP 1.59 d.173.1 |
|
|
| 15490 |
SCOP 1.59 d.174.1 |
|
|
| 15103 |
SCOP 1.59 d.175.1 |
|
|
| 15374 |
SCOP 1.59 d.176.1 |
|
|
| 15086 |
SCOP 1.59 d.177.1 |
|
|
| 15345 |
SCOP 1.59 d.178.1 |
|
|
| 15390 |
SCOP 1.59 d.179.1 |
|
|
| 15096 |
SCOP 1.59 d.18.1 |
|
|
| 15231 |
SCOP 1.59 d.181.1 |
|
|
| 15253 |
SCOP 1.59 d.185.1 |
|
|
| 15123 |
SCOP 1.59 d.2.1 |
|
|
| 15269 |
SCOP 1.59 d.20 |
|
|
| 15435 |
SCOP 1.59 d.21.1 |
|
|
| 15428 |
SCOP 1.59 d.23.1 |
|
|
| 15512 |
SCOP 1.59 d.24.1 |
|
|
| 15388 |
SCOP 1.59 d.25.1 |
|
|
| 15088 |
SCOP 1.59 d.26 |
|
|
| 15055 |
SCOP 1.59 d.27.1 |
|
|
| 15535 |
SCOP 1.59 d.28.1 |
|
|
| 15284 |
SCOP 1.59 d.29.1 |
|
|
| 15276 |
SCOP 1.59 d.3.1 |
|
|
| 15459 |
SCOP 1.59 d.30.1 |
|
|
| 15239 |
SCOP 1.59 d.31.1 |
|
|
| 15272 |
SCOP 1.59 d.32.1 |
|
|
| 15115 |
SCOP 1.59 d.33.1 |
|
|
| 15245 |
SCOP 1.59 d.34.1 |
|
|
| 15555 |
SCOP 1.59 d.35.1 |
|
|
| 15481 |
SCOP 1.59 d.36.1 |
|
|
| 15377 |
SCOP 1.59 d.37.1 |
|
|
| 15386 |
SCOP 1.59 d.38.1 |
|
|
| 15280 |
SCOP 1.59 d.39 |
|
|
| 15464 |
SCOP 1.59 d.4.1 |
|
|
| 15358 |
SCOP 1.59 d.40.1 |
|
|
| 15442 |
SCOP 1.59 d.41 |
|
|
| 15249 |
SCOP 1.59 d.42.1 |
|
|
| 15577 |
SCOP 1.59 d.43.1 |
|
|
| 15240 |
SCOP 1.59 d.44.1 |
|
|
| 15434 |
SCOP 1.59 d.45.1 |
|
|
| 15278 |
SCOP 1.59 d.47.1 |
|
|
| 15182 |
SCOP 1.59 d.48 |
|
|
| 15415 |
SCOP 1.59 d.49.1 |
|
|
| 15246 |
SCOP 1.59 d.5.1 |
|
|
| 15266 |
SCOP 1.59 d.50 |
|
|
| 15575 |
SCOP 1.59 d.51.1 |
|
|
| 15104 |
SCOP 1.59 d.52 |
|
|
| 15362 |
SCOP 1.59 d.52.3 |
|
|
| 15287 |
SCOP 1.59 d.53.1 |
|
|
| 15391 |
SCOP 1.59 d.54.1 |
|
|
| 15505 |
SCOP 1.59 d.55.1 |
|
|
| 15134 |
SCOP 1.59 d.56.1 |
|
|
| 15344 |
SCOP 1.59 d.57.1 |
|
|
| 15584 |
SCOP 1.59 d.58 |
|
|
| 15117 |
SCOP 1.59 d.59.1 |
|
|
| 15243 |
SCOP 1.59 d.6.1 |
|
|
| 15054 |
SCOP 1.59 d.60.1 |
|
|
| 15586 |
SCOP 1.59 d.61.1 |
|
|
| 15432 |
SCOP 1.59 d.63.1 |
|
|
| 15124 |
SCOP 1.59 d.64.1 |
|
|
| 15310 |
SCOP 1.59 d.65.1 |
|
|
| 15244 |
SCOP 1.59 d.66.1 |
|
|
| 15419 |
SCOP 1.59 d.67 |
|
|
| 15222 |
SCOP 1.59 d.68 |
|
|
| 15216 |
SCOP 1.59 d.69.1 |
|
|
| 15225 |
SCOP 1.59 d.7.1 |
|
|
| 15327 |
SCOP 1.59 d.71.1 |
|
|
| 15120 |
SCOP 1.59 d.72.1 |
|
|
| 15572 |
SCOP 1.59 d.73.1 |
|
|
| 15541 |
SCOP 1.59 d.74 |
|
|
| 15545 |
SCOP 1.59 d.75 |
|
|
| 15489 |
SCOP 1.59 d.76.1 |
|
|
| 15389 |
SCOP 1.59 d.77.1 |
|
|
| 15582 |
SCOP 1.59 d.78.1 |
|
|
| 15550 |
SCOP 1.59 d.79 |
|
|
| 15251 |
SCOP 1.59 d.8.1 |
|
|
| 15099 |
SCOP 1.59 d.80.1 |
|
|
| 15315 |
SCOP 1.59 d.81.1 |
|
|
| 15427 |
SCOP 1.59 d.82 |
|
|
| 15271 |
SCOP 1.59 d.83.1 |
|
|
| 15060 |
SCOP 1.59 d.84.1 |
|
|
| 15228 |
SCOP 1.59 d.86.1 |
|
|
| 15355 |
SCOP 1.59 d.87 |
|
|
| 15483 |
SCOP 1.59 d.88.1 |
|
|
| 15330 |
SCOP 1.59 d.89.1 |
|
|
| 15524 |
SCOP 1.59 d.9 |
|
|
| 15367 |
SCOP 1.59 d.90.1 |
|
|
| 15148 |
SCOP 1.59 d.91.1 |
|
|
| 15384 |
SCOP 1.59 d.92 |
|
|
| 15347 |
SCOP 1.59 d.93.1 |
|
|
| 15321 |
SCOP 1.59 d.94.1 |
|
|
| 15461 |
SCOP 1.59 d.95 |
|
|
| 15488 |
SCOP 1.59 d.96.1 |
|
|
| 15297 |
SCOP 1.59 d.97.1 |
|
|
| 15077 |
SCOP 1.59 d.98.1 |
|
|
| 15439 |
SCOP 1.59 d.99.1 |
|
|
| 15057 |
SCOP 1.59 e.1.1 |
|
|
| 15133 |
SCOP 1.59 e.10.1 |
|
|
| 15570 |
SCOP 1.59 e.11.1 |
|
|
| 15500 |
SCOP 1.59 e.12.1 |
|
|
| 15179 |
SCOP 1.59 e.13.1 |
|
|
| 15593 |
SCOP 1.59 e.14.1 |
|
|
| 15380 |
SCOP 1.59 e.15.1 |
|
|
| 15425 |
SCOP 1.59 e.16.1 |
|
|
| 15296 |
SCOP 1.59 e.17.1 |
|
|
| 15229 |
SCOP 1.59 e.18.1 |
|
|
| 15523 |
SCOP 1.59 e.19.1 |
|
|
| 15142 |
SCOP 1.59 e.2.1 |
|
|
| 15071 |
SCOP 1.59 e.20.1 |
|
|
| 15149 |
SCOP 1.59 e.21.1 |
|
|
| 15564 |
SCOP 1.59 e.22.1 |
|
|
| 15174 |
SCOP 1.59 e.23.1 |
|
|
| 15387 |
SCOP 1.59 e.24.1 |
|
|
| 15557 |
SCOP 1.59 e.25.1 |
|
|
| 15552 |
SCOP 1.59 e.26.1 |
|
|
| 15250 |
SCOP 1.59 e.3.1 |
|
|
| 15369 |
SCOP 1.59 e.4.1 |
|
|
| 15596 |
SCOP 1.59 e.5.1 |
|
|
| 15479 |
SCOP 1.59 e.6.1 |
|
|
| 15551 |
SCOP 1.59 e.7.1 |
|
|
| 15121 |
SCOP 1.59 e.8.1 |
|
|
| 15061 |
SCOP 1.59 e.9.1 |
|
|
| 15083 |
SCOP 1.59 f.1 |
|
|
| 15168 |
SCOP 1.59 f.11.1 |
|
|
| 15553 |
SCOP 1.59 f.2.1 |
|
|
| 15401 |
SCOP 1.59 f.4 |
|
|
| 15064 |
SCOP 1.59 f.5.1 |
|
|
| 15395 |
SCOP 1.59 f.6.1 |
|
|
| 15283 |
SCOP 1.59 f.7.1 |
|
|
| 15365 |
SCOP 1.59 g.1.1 |
|
|
| 15458 |
SCOP 1.59 g.10.1 |
|
|
| 15163 |
SCOP 1.59 g.11.1 |
|
|
| 15076 |
SCOP 1.59 g.12.1 |
|
|
| 15477 |
SCOP 1.59 g.13.1 |
|
|
| 15493 |
SCOP 1.59 g.14.1 |
|
|
| 15466 |
SCOP 1.59 g.15.1 |
|
|
| 15087 |
SCOP 1.59 g.16.1 |
|
|
| 15511 |
SCOP 1.59 g.17.1 |
|
|
| 15165 |
SCOP 1.59 g.18.1 |
|
|
| 15181 |
SCOP 1.59 g.19.1 |
|
|
| 15143 |
SCOP 1.59 g.20.1 |
|
|
| 15515 |
SCOP 1.59 g.21.1 |
|
|
| 15135 |
SCOP 1.59 g.22.1 |
|
|
| 15475 |
SCOP 1.59 g.23.1 |
|
|
| 15145 |
SCOP 1.59 g.24.1 |
|
|
| 15468 |
SCOP 1.59 g.27.1 |
|
|
| 15212 |
SCOP 1.59 g.28.1 |
|
|
| 15469 |
SCOP 1.59 g.3 |
|
|
| 15192 |
SCOP 1.59 g.32.1 |
|
|
| 15431 |
SCOP 1.59 g.34.1 |
|
|
| 15496 |
SCOP 1.59 g.35.1 |
|
|
| 15361 |
SCOP 1.59 g.36.1 |
|
|
| 15066 |
SCOP 1.59 g.37.1 |
|
|
| 15318 |
SCOP 1.59 g.38.1 |
|
|
| 15336 |
SCOP 1.59 g.39.1 |
|
|
| 15566 |
SCOP 1.59 g.40.1 |
|
|
| 15379 |
SCOP 1.59 g.41 |
|
|
| 15494 |
SCOP 1.59 g.42.1 |
|
|
| 15286 |
SCOP 1.59 g.44.1 |
|
|
| 15282 |
SCOP 1.59 g.45.1 |
|
|
| 15556 |
SCOP 1.59 g.47.1 |
|
|
| 15516 |
SCOP 1.59 g.48.1 |
|
|
| 15338 |
SCOP 1.59 g.49.1 |
|
|
| 15592 |
SCOP 1.59 g.50.1 |
|
|
| 15476 |
SCOP 1.59 g.52.1 |
|
|
| 15444 |
SCOP 1.59 g.53.1 |
|
|
| 15470 |
SCOP 1.59 g.54.1 |
|
|
| 15200 |
SCOP 1.59 g.6.1 |
|
|
| 15303 |
SCOP 1.59 g.7.1 |
|
|
| 15595 |
SCOP 1.59 g.8.1 |
|
|
| 15312 |
SCOP 1.59 g.9.1 |
|
|
| 15332 |
SCOP 1.59 j.24.1 |
|
|
| 15478 |
SCOP 1.59 j.27.1 |
|
|
| 15533 |
SCOP 1.59 j.42.1 |
|
|
| 15110 |
SCOP 1.59 j.46.1 |
|
|
| 15301 |
SCOP 1.59 j.49.1 |
|
|
| 15078 |
SCOP 1.59 j.54.1 |
|
|
| 15340 |
SCOP 1.59 j.7.1 |
|
|
| 15360 |
SCOP 1.59 j.78 |
|
|
| 235143 |
Saccharomyces cerevisiae |
4932
|
3872294
|
| 235092 |
Schizosaccharomyces pombe |
4896
|
3113158
|
| 234917 |
Staphylococcus aureus |
1280
|
229856
|
| 234882 |
Sulfolobus solfataricus |
273057
|
5325958
|
| 15044 |
Sulfolobus tokodaii |
273063
|
5960388
|
| 235325 |
Synechocystis sp |
1142
|
230069
|
| 235072 |
Thermoplasma acidophilum |
2303
|
5325970
|
| 235144 |
Thermotoga maritima |
2336
|
2559669
|
| 235005 |
Treponema pallidum |
160
|
2559812
|