@ARTICLE{TreeBASE2Ref19586,
author = {Sepideh Massoumi Alamouti and Vincent Wang and Scott DiGuistini and Diana L Six and J?rg Bohlmann and Richard C. Hamelin and Nicolas Feau and Colette Breuil},
title = {Gene genealogies reveal cryptic species and host preferences for the pine fungal pathogen Grosmannia clavigera},
year = {2011},
keywords = {Grosmannia clavigera, fungal pathogen, cryptic species, Mountain pine beetle, host adaptation, pine tree},
doi = {},
url = {http://},
pmid = {},
journal = {Molecular Ecology},
volume = {},
number = {},
pages = {},
abstract = {Grosmannia clavigera is a fungal pathogen of pine forests in western North America and a symbiotic associate of two sister bark beetles: Dendroctonus ponderosae and D. jeffreyi. This fungus and its beetle associate D. ponderosae are expanding in large epidemics in western North America. Using the fungal genome sequence and gene annotations, we assessed whether fungal isolates from the two beetles inhabiting different species of pine in epidemic regions of western Canada and the USA, as well as in localized populations outside of the current epidemic, represent different genetic lineages. We characterized nucleotide variations in 67 genomic regions and selected 15 for the phylogenetic analysis. Using concordance of gene genealogies and distinct ecological characteristics, we identified two sibling phylogenetic species: Gc and Gs. Where the closely-related Pinus ponderosa and P. jeffreyi are infested by localized populations of their respective beetles, Gc is present. In contrast, Gs is an exclusive associate of D. ponderosae mainly present on its primary host tree P. contorta; however, in the current epidemic areas, is also found in other pine species. These results suggest that the host tree species and the beetle population dynamics may be important factors associated with the genetic divergence and diversity of fungal partners in the beetle-tree ecosystems. Gc represents the original G. clavigera holotype, and Gs should be described as a new species. }
}
Taxa for Study 11355

Citation title:
"Gene genealogies reveal cryptic species and host preferences for the pine fungal pathogen Grosmannia clavigera".

Study name:
"Gene genealogies reveal cryptic species and host preferences for the pine fungal pathogen Grosmannia clavigera".

This study is part of submission 11345
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
516406 |
Grosmannia aurea UB |
|
|
516379 |
Grosmannia clavigera B16 |
226899
|
10222770
|
516419 |
Grosmannia clavigera C08 |
226899
|
10222770
|
516391 |
Grosmannia clavigera C09 |
226899
|
10222770
|
516365 |
Grosmannia clavigera C10 |
226899
|
10222770
|
516377 |
Grosmannia clavigera C11 |
226899
|
10222770
|
516351 |
Grosmannia clavigera C12 |
226899
|
10222770
|
516367 |
Grosmannia clavigera C13 |
226899
|
10222770
|
516372 |
Grosmannia clavigera C14 |
226899
|
10222770
|
516407 |
Grosmannia clavigera C15 |
226899
|
10222770
|
516386 |
Grosmannia clavigera C16 |
226899
|
10222770
|
516370 |
Grosmannia clavigera C17 |
226899
|
10222770
|
516364 |
Grosmannia clavigera C18 |
226899
|
10222770
|
516410 |
Grosmannia clavigera C19 |
226899
|
10222770
|
516404 |
Grosmannia clavigera C20 |
226899
|
10222770
|
516355 |
Grosmannia clavigera C21 |
226899
|
10222770
|
516418 |
Grosmannia clavigera C22 |
226899
|
10222770
|
516393 |
Grosmannia clavigera C23 |
226899
|
10222770
|
516408 |
Grosmannia clavigera C24 |
226899
|
10222770
|
516352 |
Grosmannia clavigera C25 |
226899
|
10222770
|
516384 |
Grosmannia clavigera D01 |
226899
|
10222770
|
516363 |
Grosmannia clavigera D02 |
226899
|
10222770
|
516354 |
Grosmannia clavigera D03 |
226899
|
10222770
|
516423 |
Grosmannia clavigera Gc ATCC |
226899
|
10222770
|
516420 |
Grosmannia clavigera Gc11351 |
226899
|
10222770
|
516360 |
Grosmannia sp A01 |
|
|
516397 |
Grosmannia sp A02 |
|
|
516389 |
Grosmannia sp A03 |
|
|
516392 |
Grosmannia sp A04 |
|
|
516409 |
Grosmannia sp A05 |
|
|
516373 |
Grosmannia sp A06 |
|
|
516414 |
Grosmannia sp A07 |
|
|
516415 |
Grosmannia sp A08 |
|
|
516375 |
Grosmannia sp A09 |
|
|
516368 |
Grosmannia sp A10 |
|
|
516411 |
Grosmannia sp A11 |
|
|
516378 |
Grosmannia sp A12 |
|
|
516388 |
Grosmannia sp B01 |
|
|
516359 |
Grosmannia sp B02 |
|
|
516369 |
Grosmannia sp B03 |
|
|
516387 |
Grosmannia sp B04 |
|
|
516380 |
Grosmannia sp B05 |
|
|
516381 |
Grosmannia sp B06 |
|
|
516390 |
Grosmannia sp B07 |
|
|
516405 |
Grosmannia sp B08 |
|
|
516412 |
Grosmannia sp B09 |
|
|
516361 |
Grosmannia sp B10 |
|
|
516357 |
Grosmannia sp B11 |
|
|
516353 |
Grosmannia sp B12 |
|
|
516399 |
Grosmannia sp B13 |
|
|
516401 |
Grosmannia sp B14 |
|
|
516398 |
Grosmannia sp B15 |
|
|
516350 |
Grosmannia sp C01 |
|
|
516376 |
Grosmannia sp C02 |
|
|
516383 |
Grosmannia sp C03 |
|
|
516385 |
Grosmannia sp C04 |
|
|
516382 |
Grosmannia sp C05 |
|
|
516356 |
Grosmannia sp C06 |
|
|
516362 |
Grosmannia sp C07 |
|
|
516421 |
Grosmannia sp Gs11150 |
|
|
516425 |
Grosmannia sp Gs11151 |
|
|
516428 |
Grosmannia sp Gs11152 |
|
|
516424 |
Grosmannia sp Gs11153 |
|
|
516422 |
Grosmannia sp Gs11154 |
|
|
516426 |
Grosmannia sp Gs11155 |
|
|
516427 |
Grosmannia sp Gs11347 |
|
|
516403 |
Grosmannia sp I01 |
|
|
516416 |
Grosmannia sp I02 |
|
|
516396 |
Grosmannia sp M01 |
|
|
516395 |
Grosmannia sp M02 |
|
|
516417 |
Grosmannia sp Z01 |
|
|
516374 |
Grosmannia sp Z02 |
|
|
516358 |
Leptographium longiclavatum LB |
300481
|
5980867
|
516413 |
Leptographium longiclavatum LC |
300481
|
5980867
|
516371 |
Leptographium terebrantis TB1 |
96390
|
3195935
|
516366 |
Leptographium terebrantis TB2 |
96390
|
3195935
|
516394 |
Leptographium terebrantis TC1 |
96390
|
3195935
|
516402 |
Leptographium wingfieldii WF |
155675
|
3039765
|
516400 |
Leptographium wingfieldii WG |
155675
|
3039765
|