@ARTICLE{TreeBASE2Ref21668,
author = {Lien Bertier and Henk Brouwer and Arthur W.A.M. de Cock and David E.L. Cooke and Christer Olsson and Monica Hofte},
title = {The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops},
year = {2013},
keywords = {Phytophthora; species description; host specificity; phylogeny; low temperatures; vegetables },
doi = {10.3767/003158513X668554},
url = {http://www.persoonia.org/Issue/31/03.pdf},
pmid = {},
journal = {Persoonia: Molecular Phylogeny and Evolution of Fungi},
volume = {31},
number = {},
pages = {63--76},
abstract = {Despite its association with important agricultural crops, Phytophthora clade 8b is a poorly studied group of species. The clade currently consists of three officially described species (Phytophthora porri, Phytophthora brassicae and Phytophthora primulae) that are host-specific pathogens of leek, cabbages and Primula spp., respectively. However, over the past few decades, several other clade 8b-like Phytophthoras have been found on a variety of different host plants that were all grown at low temperatures in winter seasons. In this study, a collection of 30 of these isolates was subjected to a phylogenetic study using two loci (the rDNA ITS region and the mitochondrial coxI gene). This analysis revealed a clear clustering of isolates according to their host plants. To verify whether these isolates belong to separate species, a detailed morphological study was conducted. On the basis of genetic and morphological differences and host specificity, we now propose the official description of three new species in clade 8b: Phytophthora dauci sp. nov., Phytophthora cichorii sp. nov. and Phytophthora lactucae sp. nov. Two other groups of isolates (Phytophthora taxon castitis and Phytophthora taxon parsley) might also represent new species but the data available at this time is insufficient for an official description. This brings Phytophthora clade 8b to a group of six species that are all host-specific, slow-growing and specifically infect herbaceous crops at low temperatures.}
}
Taxa for Study 13805

Citation title:
"The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops".

Study name:
"The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops".

This study is part of submission 13805
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
975187 |
Phytophthora austrocedrae CBS 122911 |
|
|
975167 |
Phytophthora brassicae CBS 112277 |
187813
|
3948732
|
975179 |
Phytophthora brassicae CBS 113350 |
187813
|
3948732
|
975188 |
Phytophthora brassicae CBS 127274 |
187813
|
3948732
|
975176 |
Phytophthora brassicae CBS 212.82 |
187813
|
3948732
|
975156 |
Phytophthora brassicae CBS 782.97 |
187813
|
3948732
|
975165 |
Phytophthora cichorii CBS 114345 |
|
|
975171 |
Phytophthora cichorii CBS 115029 |
|
|
975178 |
Phytophthora cichorii CBS 115030 |
|
|
975160 |
Phytophthora cichorii CBS 133815 |
|
|
975161 |
Phytophthora cryptogea CBS 418.71 |
4786
|
3129314
|
975199 |
Phytophthora dauci CBS 114039 |
|
|
975169 |
Phytophthora dauci CBS 127102 |
|
|
975195 |
Phytophthora drechsleri CBS 292.35 |
4794
|
3146142
|
975190 |
Phytophthora erythroseptica CBS 129.23 |
111171
|
3129370
|
975192 |
Phytophthora foliorum CBS 121655 |
415976
|
10330402
|
975181 |
Phytophthora hibernalis CBS 522.77 |
175300
|
3156512
|
975189 |
Phytophthora lactucae BPIC1985 |
|
|
975198 |
Phytophthora lactucae BPIC1986 |
|
|
975182 |
Phytophthora lactucae BPIC1988 |
|
|
975184 |
Phytophthora lactucae BPIC1991 |
|
|
975166 |
Phytophthora lactucae BPIC1992 |
|
|
975196 |
Phytophthora medicaginis CBS 117685 |
54510
|
3041871
|
975164 |
Phytophthora megasperma CBS 367.79 |
4788
|
3158893
|
975177 |
Phytophthora obscura JP09059 |
|
|
975170 |
Phytophthora porri CBS 114100 |
129359
|
3161723
|
975157 |
Phytophthora porri CBS 116662 |
129359
|
3161723
|
975193 |
Phytophthora porri CBS 127099 |
129359
|
3161723
|
975183 |
Phytophthora porri CBS 127101 |
129359
|
3161723
|
975185 |
Phytophthora porri CBS 802.95 |
129359
|
3161723
|
975180 |
Phytophthora primulae CBS 110162 |
129360
|
3184329
|
975174 |
Phytophthora primulae CBS 110167 |
129360
|
3184329
|
975175 |
Phytophthora primulae CBS 114346 |
129360
|
3184329
|
975197 |
Phytophthora primulae CBS 116663 |
129360
|
3184329
|
975173 |
Phytophthora primulae CBS 620.97 |
129360
|
3184329
|
975186 |
Phytophthora ramorum CBS 109278 |
164328
|
3362768
|
975159 |
Phytophthora sansomea CBS 957.87 |
358102
|
5985454
|
975200 |
Phytophthora sansomeana CBS 957.87 |
358102
|
5985454
|
975194 |
Phytophthora syringae CBS 110161 |
67594
|
3098457
|
975172 |
Phytophthora syringae CBS 114110 |
67594
|
3098457
|
975163 |
Phytophthora taxon castitis CBS 131246 |
|
|
975168 |
Phytophthora taxon castitis CBS 688.79 |
|
|
975191 |
Phytophthora taxon parsley BPIC2584 |
|
|
975162 |
Phytophthora taxon parsley CBS 114156 |
|
|
975158 |
Phytophthora trifolii CBS 117687 |
54511
|
3041872
|