@ARTICLE{TreeBASE2Ref17126,
author = {Amy Jo Powell and David J Jacobson and D. O. Natvig},
title = {Ancestral polymorphism and linkage disequilbrium at the het-6 region in pseudohomothallic Neurospora tetrasperma},
year = {2007},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Fungal Genetics and Biology},
volume = {},
number = {},
pages = {},
abstract = {In species of Neurospora, non-self recognition is mediated by at least 11 heterokaryon (het) incompatibility loci. Previously, we identified ancient allelic variation at het-c in pseudohomothallic N. tetrasperma, which confirmed outcrossing in this species. Here, we report distinct ancestral alleles at het-6 and un-24, two closely linked genes with het incompatibility function in N. crassa. The pattern of variation at het-6 and un-24 in N. tetrasperma is similar to that observed for N. crassa, where two ancestral allele specificities exist for each locus, Oak Ridge (het-6OR, un-24OR) and Panama (het-6PA, un-24PA). Only het-6OR/un-24OR and het-6PA/un-24PA allele combinations have been observed. The absence of recombinant haplotypes (e.g., het-6OR/un-24PA) appears to derive from an ancestral chromosomal rearrangement that limits recombination. Allelic variation at this het locus in N. tetrasperma provides further evidence of outcrossing in this predominantly selfing organism and indicates that selection maintains allelic diversity at het loci.}
}
Taxa for Study 1775

Citation title:
"Ancestral polymorphism and linkage disequilbrium at the het-6 region in pseudohomothallic Neurospora tetrasperma".

This study was previously identified under the legacy study ID S1747
(Status: Published).
Taxa
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 47005 |
Neurospora crassa het-6 Oak Ridge |
5141
|
3153358
|
| 47014 |
Neurospora crassa het-6 Panama |
5141
|
3153358
|
| 46998 |
Neurospora crassa un-24 Oak Ridge |
5141
|
3153358
|
| 46997 |
Neurospora crassa un-24 Panama |
5141
|
3153358
|
| 47011 |
Neurospora tetrasperma 85 het-6 Oak Ridge |
40127
|
3148726
|
| 47003 |
Neurospora tetrasperma 85 un-24 Oak Ridge |
40127
|
3148726
|
| 47015 |
Neurospora tetrasperma Borneo het-6 Oak Ridge |
40127
|
3148726
|
| 47002 |
Neurospora tetrasperma Borneo un-24 Oak Ridge |
40127
|
3148726
|
| 47007 |
Neurospora tetrasperma Coba het-6 Panama |
40127
|
3148726
|
| 47000 |
Neurospora tetrasperma P2356 un-24 Panama |
40127
|
3148726
|
| 47009 |
Neurospora tetrasperma P505 het-6 Oak Ridge |
40127
|
3148726
|
| 47004 |
Neurospora tetrasperma P505 un-24 Oak Ridge |
40127
|
3148726
|
| 47012 |
Neurospora tetrasperma P510 het-6 Oak Ridge |
40127
|
3148726
|
| 47006 |
Neurospora tetrasperma P514 het-6 Oak Ridge |
40127
|
3148726
|
| 47001 |
Neurospora tetrasperma P514 un-24 Oak Ridge |
40127
|
3148726
|
| 46999 |
Neurospora tetrasperma P535 Panama |
40127
|
3148726
|
| 47010 |
Neurospora tetrasperma P535 het-6 Panama |
40127
|
3148726
|
| 47013 |
Neurospora tetrasperma P556 het-6 Panama |
40127
|
3148726
|
| 46996 |
Neurospora tetrasperma P556 un-24 Panama |
40127
|
3148726
|
| 46995 |
Neurospora tetrasperma P581 Panama |
40127
|
3148726
|
| 47008 |
Neurospora tetrasperma P581 het-6 Panama |
40127
|
3148726
|