@ARTICLE{TreeBASE2Ref24841,
author = {Marcin Piatek and Matthias Lutz and Nourou Yorou},
title = {A molecular phylogenetic framework for Anthracocystis (Ustilaginales), including five new combinations (inter alia for the asexual Pseudozyma flocculosa), and description of Anthracocystis grodzinskae sp. nov.},
year = {2015},
keywords = {Anthracocystis Phylogeny Plant pathogens Pseudozyma flocculosa Smut fungi Ustilaginomycotina Yeasts},
doi = {},
url = {http://},
pmid = {},
journal = {Mycological Progress},
volume = {},
number = {},
pages = {},
abstract = {The genus Anthracocystis (Ustilaginales, Ustilaginaceae) was recently reinstated for grass-infecting species of smut fungi that have sori with a peridium composed of mostly fungal cells, filiform or slender columellae, persistent spore balls usually composed of dimorphic spores, and lacking sterile cells between spore balls. In this study Anthracocystis grodzinskae sp. nov. on Euclasta condylotricha is described and illustrated from the Sudanian savanna biome in Benin (West Africa). The new species is compared with two other smut fungi known on Euclasta condylotricha, namely Sporisorium euclastae and Anthracocystis ischaemoides, in Zambia. It differs from these species in a number of morphological characters that are discussed in detail. The systematic position of A. grodzinskae in relation to other species of Anthracocystis was determined in a phylogenetic analysis with a concatenated supermatrix of the internal transcribed spacer (ITS) and large subunit regions (LSU) of ribosomal DNA. The dataset included all representatives of Anthracocystis for which sequences were available in NCBI?s GenBank and that were linked to reliably identified source specimens, related yeast species, and unnamed yeast strains or environmental sequences. The phylogenetic hypothesis derived from the dataset is intended to serve as a backbone tree for Anthracocystis. The alignment included 19 ITS and 13 LSU sequences that represented sequences from type specimens (holotypes, isotypes or paratypes). These type sequences are recommended to be deposited in the RefSeq Targeted Loci database. This study provides the first explicit evidence that several asexual species are nested within the Anthracocystis lineage. The yeast sequences were scattered in different subclades of Anthracocystis and none of them could be directly assigned to a teleomorphic species. Only one of these yeast anamorphs was assigned to a species, namely Pseudozyma flocculosa, an important model fungus with a sequenced genome and used as a biocontrol agent against powdery mildews. In line with the current code of nomenclature, and following recent practice in merging yeast species with sexual species under the older generic name, this yeast is recombined into Anthracocystis as A. flocculosa. Additionally, new combinations are proposed for four teliosporic species (Anthracocystis andrewmitchellii, A. christineae, A. kenyana, A. warambiense).}
}
Taxa for tree 89090 of Study 17942

Citation title:
"A molecular phylogenetic framework for Anthracocystis (Ustilaginales), including five new combinations (inter alia for the asexual Pseudozyma flocculosa), and description of Anthracocystis grodzinskae sp. nov.".

Study name:
"A molecular phylogenetic framework for Anthracocystis (Ustilaginales), including five new combinations (inter alia for the asexual Pseudozyma flocculosa), and description of Anthracocystis grodzinskae sp. nov.".

This study is part of submission 17942
(Status: Published).
Taxa
Return to complete tree view
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 1925676 |
Anthracocystis abscondita HQ013090 |
|
|
| 1925722 |
Anthracocystis andrewmitchellii NR120127 JQ995370 |
|
|
| 1925715 |
Anthracocystis anthracoideispora JN367290 JN367315 |
|
|
| 1925682 |
Anthracocystis apludae AY344983 AY740136 |
|
|
| 1925675 |
Anthracocystis apludaearistatae AY740045 AY740098 |
|
|
| 1925702 |
Anthracocystis bothriochloae HQ013092 |
|
|
| 1925712 |
Anthracocystis caledonica HQ013093 |
|
|
| 1925705 |
Anthracocystis cenchri AY344972 AF453943 |
|
|
| 1925713 |
Anthracocystis cenchrielymoidis HQ013094 HQ013122 |
|
|
| 1925687 |
Anthracocystis chrysopogonis AY344973 AY740131 |
|
|
| 1925671 |
Anthracocystis cymbopogonisbombycini HQ013099 |
|
|
| 1925719 |
Anthracocystis destruens AF045871 |
|
3276583
|
| 1925726 |
Anthracocystis destruens AY344976 AY747077 |
|
3276583
|
| 1925717 |
Anthracocystis elionuri AY740157 AY740157 |
|
|
| 1925691 |
Anthracocystis enteromorpha AY740158 AY740158 |
|
|
| 1925704 |
Anthracocystis everhartii AY740159 AY740159 |
|
|
| 1925725 |
Anthracocystis fallax AY333940 |
|
|
| 1925718 |
Anthracocystis fallax AY333941 |
|
|
| 1925711 |
Anthracocystis fallax AY333942 |
|
|
| 1925685 |
Anthracocystis flocculosa AB089364 AB089365 |
|
|
| 1925680 |
Anthracocystis flocculosa DQ411535 AY745712 |
|
|
| 1925730 |
Anthracocystis formosana AY344979 AY740134 |
|
|
| 1925690 |
Anthracocystis gayana JN872445 JN872445 |
|
|
| 1925688 |
Anthracocystis grodzinskae KP297998 KP297996 |
|
|
| 1925703 |
Anthracocystis grodzinskae KP297999 KP297997 |
|
|
| 1925723 |
Anthracocystis heteropogonicola HQ013101 HQ013135 |
|
|
| 1925710 |
Anthracocystis hwangensis AY740051 AY740104 |
|
|
| 1925689 |
Anthracocystis loudetiaepedicellatae AY740053 AY740106 |
|
|
| 1925709 |
Anthracocystis mexicana AY998101 |
|
|
| 1925731 |
Anthracocystis mutabile HQ013105 |
|
|
| 1925708 |
Anthracocystis ovaria AY740020 AJ236137 |
|
|
| 1925699 |
Anthracocystis panicileucophaei AY344986 |
|
|
| 1925683 |
Anthracocystis panicileucophaei AY740035 AY740088 |
|
|
| 1925707 |
Anthracocystis panicileucophaei AY998102 |
|
|
| 1925678 |
Anthracocystis penniseti AY344971 AY740130 |
|
|
| 1925724 |
Anthracocystis polliniae AY344987 AY740138 |
|
|
| 1925733 |
Anthracocystis provincialis AY344988 AY747076 |
|
|
| 1925692 |
Anthracocystis pseudanthistiriae JN367295 JN367320 |
|
|
| 1925684 |
Anthracocystis sehimatis HQ013110 |
|
|
| 1925695 |
Anthracocystis setariae HQ013111 |
|
|
| 1925714 |
Anthracocystis sp KF055229 KF055230 |
|
|
| 1925728 |
Anthracocystis sp KF055231 KF055232 |
|
|
| 1925696 |
Anthracocystis themedaearguentis AY344991 AY740140 |
|
|
| 1925677 |
Anthracocystis trispicatae HQ013113 |
|
|
| 1925673 |
Anthracocystis tumefaciens AY333943 |
|
|
| 1925674 |
Anthracocystis tumefaciens AY333944 |
|
|
| 1925732 |
Anthracocystis tumefaciens AY333945 |
|
|
| 1925679 |
Anthracocystis tumefaciens AY344969 AY740128 |
|
|
| 1925720 |
Anthracocystis walkeri JN367297 JN367322 |
|
|
| 1925734 |
Anthracocystis whiteochloae HQ013115 |
|
|
| 1925694 |
Anthracocystis xerofasciculata HQ013117 |
|
|
| 1925670 |
Langdonia confusa HQ013095 HQ013132 |
|
|
| 1925706 |
Triodiomyces triodiae AY740074 AY740126 |
|
|
| 1925681 |
Ustilaginaceae sp EF060742 |
|
|
| 1925716 |
Ustilaginales sp EF060455 |
|
|
| 1925697 |
Ustilaginales sp EF060922 |
|
|
| 1925701 |
Ustilaginales sp EF060953 |
|
|
| 1925686 |
Ustilaginales sp EF060955 |
|
|
| 1925693 |
uncultured fungus clone JX389323 |
|
|
| 1925721 |
uncultured soil fungus clone DQ421310 |
|
|
| 1925700 |
yeast isolate AB726473 |
|
|
| 1925727 |
yeast isolate AB863531 |
|
|
| 1925729 |
yeast isolate AM160638 |
|
|
| 1925698 |
yeast isolate JF292447 HQ641273 |
|
|
| 1925672 |
yeast isolate JQ993391 |
|
|