@ARTICLE{TreeBASE2Ref25015,
author = {Emily Walsh and Jing Luo and Abhishek Naik and Thomas Preteroti and Ning Zhang},
title = {Barrenia, a new genus associated with roots of switchgrass and pine in the oligotrophic pine barrens },
year = {2015},
keywords = {Dark septate endophytes; Grass; Growth promotion; Leotiomycetes; Phylogeny; Taxonomy },
doi = {},
url = {http://},
pmid = {},
journal = {Fungal Biology},
volume = {},
number = {},
pages = {},
abstract = {A new genus Barrenia is described based on multi-gene phylogenetic analyses, phenotypic and ecological characters. Isolated from roots of switchgrass and pitch pine in the acidic and oligotrophic New Jersey Pine Barrens in this study, Barrenia likely has a wide distribution because its internal transcribed spacer (ITS) sequence has high similarity with a number of GenBank sequences from various ecological studies. The majority of these matching samples were from roots of plants in acidic, nutrient-poor environments, as well as from managed sugarcane plantations. Phylogenetic analyses based on ITS, LSU and RPB1 sequence data strongly support that Barrenia is a monophyletic clade in Helotiales, distinct from any known taxa. Barrenia is phylogenetically close to Acidomelania, Loramyces, Mollisia, and Phialocephala fortinii - Acephala applanata species complex (PAC), the dark septate endophytes. Barrenia can be distinguished from Loramyces and Mollisia by its association with living plant roots. Taxa in PAC also are root endophytes but they have complex phialid arrangements that appear to be lacking in Barrenia. Plant-fungal interaction experiments showed that Barrenia panicia and Acidomelania panicicola significantly promoted root hair growth in switchgrass. Results from this work will facilitate ecological and evolutionary studies on root-associated fungi. }
}
Taxa for Study 18173

Citation title:
"Barrenia, a new genus associated with roots of switchgrass and pine in the oligotrophic pine barrens ".

Study name:
"Barrenia, a new genus associated with roots of switchgrass and pine in the oligotrophic pine barrens ".

This study is part of submission 18173
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
1985885 |
Acephala applanata AY078145 |
327282
|
5983547
|
1985879 |
Acephala applanata AY078151 |
327282
|
5983547
|
1985848 |
Acephala applanata KF951051 |
327282
|
5983547
|
1985880 |
Acephala macrosclerotiorum HM189719 |
|
|
1985881 |
Acephala sp. GU973749 Sugarcane root Brazil |
|
|
1985883 |
Acephala sp. HQ889709 Cymbidium insigne root China |
|
|
1985860 |
Acidomelania panicicola KF874619 |
|
|
1985875 |
Acidomelania panicicola KF874620 |
|
|
1985840 |
Acidomelania panicicola KF874621 |
|
|
1985851 |
Acidomelania panicicola KF874622 |
|
|
1985849 |
Barrenia panicia AL5m2 |
|
|
1985871 |
Barrenia panicia CM11M2 |
|
|
1985838 |
Barrenia panicia CM11m2 |
|
|
1985859 |
Barrenia panicia WSF1R37 |
|
|
1985853 |
Barrenia taeda CM14P64 |
|
|
1985827 |
Barrenia taeda WSF14P13 |
|
|
1985856 |
Barrenia taeda WSF14P22 |
|
|
1985833 |
Botryotinia fuckeliana AY544651 |
40559
|
3168178
|
1985846 |
Bulgaria inquinans DQ470960 |
73172
|
3056535
|
1985834 |
Chlorovibrissea sp DQ257352 |
|
|
1985852 |
Collembolispora aristata KC005811 |
|
|
1985858 |
Cudoniella clavus DQ470944 |
315222
|
3207455
|
1985877 |
Cudoniella clavus DQ491502 |
315222
|
3207455
|
1985862 |
Dermea acerina AF141164 |
108551
|
3035090
|
1985847 |
Dermea acerina DQ247801 |
108551
|
3035090
|
1985836 |
Fabrella tsugae AF356694 |
66499
|
3871589
|
1985835 |
Hyaloscypha aureliella EU940152 |
47748
|
3041828
|
1985874 |
Hyaloscypha aureliella JN943611 |
47748
|
3041828
|
1985844 |
Hyaloscypha vitreola FJ477058 |
585615
|
3038645
|
1985828 |
Lachnum virgineum AY544646 |
47828
|
3230098
|
1985864 |
Lachnum virgineum DQ491485 |
47828
|
3230098
|
1985842 |
Lambertella subrenispora DQ470978 |
38464
|
1137594
|
1985837 |
Leotia lubrica AY544644 |
39932
|
3076237
|
1985857 |
Loramyces macrosporus DQ470957 |
380016
|
3220911
|
1985866 |
Loramyces macrosporus DQ471005 |
380016
|
3220911
|
1985841 |
Microglossum rufum DQ470981 |
211506
|
3037906
|
1985850 |
Mollisia cinerea DQ470942 |
186290
|
3871596
|
1985865 |
Mollisia cinerea DQ491498 |
186290
|
3871596
|
1985843 |
Mollisia dextrinospora HM116757 |
237556
|
3030096
|
1985832 |
Monilinia laxa AY544670 |
61186
|
3034674
|
1985878 |
Monilinia laxa EF153017 |
61186
|
3034674
|
1985854 |
Neobulgaria lilacina EU940141 |
0
|
3197685
|
1985845 |
Neobulgaria pura FJ176865 |
45434
|
3162140
|
1985830 |
Neofabraea malicorticis AY544662 |
108569
|
3276961
|
1985855 |
Phialocephala dimorphospora AB671465 |
80717
|
3213781
|
1985839 |
Phialocephala fortinii AB671466 |
62722
|
3021896
|
1985876 |
Phialocephala fortinii AB671499 |
62722
|
3021896
|
1985882 |
Phialocephala scopiformis AF486126 |
149040
|
3262201
|
1985884 |
Phialocephala sp. JQ272328 Rhododendron root USA |
|
|
1985826 |
Spathularia velutipes FJ997861 |
133506
|
3104394
|
1985829 |
Varicosporium elodeae JN941371 |
252464
|
3127246
|
1985863 |
Vibrissea truncorum EU434855 |
315230
|
3112839
|
1985831 |
Vibrissea truncorum FJ176874 |
315230
|
3112839
|