@ARTICLE{TreeBASE2Ref25203,
author = {Pablo Alvarado and Julio Cabero and Gabriel Moreno and Zolt?n Bratek and Nicolas Van Vooren and Vasileios Kaounas and Giorgos Konstantinidis and Carlo Agnello and Zsolt Mer?nyi and Matthew E. Smith and Alfredo Vizzini and James M. Trappe},
title = {Phylogenetic overview of the genus Genea (Pezizales, Ascomycota) with an emphasis on European taxa},
year = {2015},
keywords = {},
doi = {},
url = {http://},
pmid = {},
journal = {Mycologia},
volume = {},
number = {},
pages = {},
abstract = {We constructed a comprehensive phylogeny of the genus Genea, with new molecular data from samples collected in several countries in temperate and Mediterranean Europe, as well as North America. Type specimens and original material from the authors of most species were examined to support identifications. The molecular identity of the most common species in Genea was compared with internal transcribed spacer rDNA (ITS), ribosomal large subunit (nuc 28S) and translation elongation factor 1-α gene (TEF1) profiles of ten recently proposed taxa (G. brunneocarpa, G. compressa, G. dentata, G. fageticola, G. lobulata, G. oxygala, G. pinicola, G. pseudobalsleyi, G. pseudoverrucosa and G. tuberculata), supporting their status as independent species. Genea mexicana and G. thaxteri on the one hand, and Genea sphaerica and G. lespiaultii on the other, are closely related. Multiple genetic lineages were recorded for G. verrucosa and G. fragrans, but we found no morphological traits to discriminate among them, so we tentatively interpreted them as cryptic species. A key to the genus Genea is provided to facilitate identification of the recently described species. We provide macroscopic images of fresh specimens and of representative spores of most species. Finally, we conducted a molecular analysis of the divergence time for the genus Genea and discuss the implications of our results. }
}
Taxa for Study 18402

Citation title:
"Phylogenetic overview of the genus Genea (Pezizales, Ascomycota) with an emphasis on European taxa".

Study name:
"Phylogenetic overview of the genus Genea (Pezizales, Ascomycota) with an emphasis on European taxa".

This study is part of submission 18402
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
2035430 |
Genabea cerebriformis DQ218303 |
291282
|
3193998
|
2035613 |
Genabea fragilis MA29808 |
|
|
2035604 |
Genabea fragilis MA56986 |
|
|
2035600 |
Genea anthracina JC22 |
|
|
2035586 |
Genea arenaria DQ206833 |
351132
|
3080231
|
2035433 |
Genea arenaria DQ206842 |
351132
|
3080231
|
2035444 |
Genea arenaria DQ206858 |
351132
|
3080231
|
2035608 |
Genea arenaria DQ206966 |
351132
|
3080231
|
2035602 |
Genea arenaria DQ206969 |
351132
|
3080231
|
2035609 |
Genea arenaria DQ220332 |
351132
|
3080231
|
2035467 |
Genea arenaria GH20001215 |
351132
|
3080231
|
2035571 |
Genea arenaria GK4346 |
351132
|
3080231
|
2035463 |
Genea arenaria JC31 |
351132
|
3080231
|
2035420 |
Genea arenaria JC7 |
351132
|
3080231
|
2035475 |
Genea arenaria JC8 |
351132
|
3080231
|
2035603 |
Genea arenaria KC012675 KC109233 |
351132
|
3080231
|
2035411 |
Genea arenaria MES222 |
351132
|
3080231
|
2035531 |
Genea arenaria NVG |
|
|
2035565 |
Genea arenaria NVH |
|
|
2035400 |
Genea arenaria NVL |
|
|
2035453 |
Genea arenaria RM1140 |
351132
|
3080231
|
2035412 |
Genea arenaria RM2194 |
351132
|
3080231
|
2035414 |
Genea balselyi Balsley9 15 |
|
|
2035597 |
Genea balsleyi ALV2413 |
352915
|
10289887
|
2035465 |
Genea balsleyi DQ218302 |
352915
|
10289887
|
2035593 |
Genea bihymeniata DQ206963 |
351643
|
10289179
|
2035596 |
Genea brachyteca DMFL08 |
|
|
2035447 |
Genea brunneocarpa AH42934 |
|
|
2035441 |
Genea brunneocarpa JC35 |
|
|
2035422 |
Genea brunneocarpa JC6 |
|
|
2035474 |
Genea brunneocarpa VK2922 |
|
|
2035505 |
Genea cazaresii DQ206863 |
351644
|
10289181
|
2035468 |
Genea cf anthracina GH20100829 |
|
|
2035547 |
Genea cf anthracina JC22 |
|
|
2035492 |
Genea cf anthracina JC3 |
|
|
2035416 |
Genea cf brachyteca DMFL08 4 |
|
|
2035562 |
Genea cf subbaetica VK1342 |
|
|
2035610 |
Genea cf subbaetica VK3291 |
|
|
2035541 |
Genea cf subbaetica ZB1523 |
|
|
2035519 |
Genea cf thaxteri MES284 |
|
|
2035567 |
Genea cf thaxteri MES335 |
|
|
2035482 |
Genea compressa AH42944 |
|
|
2035542 |
Genea compressa JC28 |
|
|
2035513 |
Genea compressa ZB1790 |
|
|
2035523 |
Genea compressa ZB3332 |
|
|
2035445 |
Genea dentata GH20060610 |
|
|
2035569 |
Genea dentata JC19 |
|
|
2035568 |
Genea dentata NVR |
|
|
2035451 |
Genea fageticola GK4129 |
|
|
2035556 |
Genea fageticola H139 |
|
|
2035405 |
Genea fragrans AH39100 |
|
|
2035478 |
Genea fragrans AH42932 |
|
|
2035536 |
Genea fragrans AH42945 |
|
|
2035526 |
Genea fragrans GH20110810 |
|
|
2035446 |
Genea fragrans GH20130301 |
|
|
2035428 |
Genea fragrans GK4439 |
|
|
2035437 |
Genea fragrans GK5905 |
|
|
2035499 |
Genea fragrans JC18 |
|
|
2035418 |
Genea fragrans JC21 |
|
|
2035438 |
Genea fragrans JF908018 |
|
|
2035425 |
Genea fragrans NVC |
|
|
2035521 |
Genea fragrans NVQ |
|
|
2035561 |
Genea fragrans ZB1323 |
|
|
2035549 |
Genea fragrans ZB1585 |
|
|
2035491 |
Genea fragrans ZB1989 |
|
|
2035421 |
Genea fragrans ZB2490 |
|
|
2035401 |
Genea fragrans ZB2501 |
|
|
2035404 |
Genea fragrans ZB3833 |
|
|
2035577 |
Genea gardneri AY830857 |
323697
|
5994952
|
2035508 |
Genea gardneri DQ206850 |
323697
|
5994952
|
2035555 |
Genea gardneri DQ206851 |
323697
|
5994952
|
2035493 |
Genea gardneri DQ206860 |
323697
|
5994952
|
2035500 |
Genea gardneri DQ249869 |
323697
|
5994952
|
2035595 |
Genea gardneri KC012676 KC109234 |
323697
|
5994952
|
2035480 |
Genea harknessii AY927851 |
304344
|
3080422
|
2035448 |
Genea harknessii DQ218283 |
304344
|
3080422
|
2035583 |
Genea harknessii DQ218284 |
304344
|
3080422
|
2035407 |
Genea harknessii DQ218285 |
304344
|
3080422
|
2035525 |
Genea harknessii DQ218289 |
304344
|
3080422
|
2035580 |
Genea harknessii DQ218290 |
304344
|
3080422
|
2035528 |
Genea harknessii DQ218292 |
304344
|
3080422
|
2035494 |
Genea harknessii DQ218293 |
304344
|
3080422
|
2035439 |
Genea harknessii DQ218294 |
304344
|
3080422
|
2035497 |
Genea harknessii DQ218296 |
304344
|
3080422
|
2035510 |
Genea harknessii DQ218301 |
304344
|
3080422
|
2035598 |
Genea harknessii DQ220334 |
304344
|
3080422
|
2035495 |
Genea harknessii MES648 |
304344
|
3080422
|
2035462 |
Genea hispidula AJ969622 |
328501
|
3080780
|
2035566 |
Genea hispidula AJ969623 |
328501
|
3080780
|
2035454 |
Genea hispidula GH20050713 |
328501
|
3080780
|
2035515 |
Genea hispidula HM189748 |
328501
|
3080780
|
2035585 |
Genea hispidula HM189753 |
328501
|
3080780
|
2035406 |
Genea hispidula JC23 |
328501
|
3080780
|
2035563 |
Genea hispidula JF908019 |
328501
|
3080780
|
2035498 |
Genea hispidula MES268 |
328501
|
3080780
|
2035572 |
Genea hispidula NVO |
|
|
2035518 |
Genea hispidula NVP |
|
|
2035534 |
Genea lespiaultii GH20040718 |
|
|
2035501 |
Genea lespiaultii NVI |
|
|
2035484 |
Genea lespiaultii NVJ |
|
|
2035559 |
Genea lespiaultii RM2140 |
|
|
2035590 |
Genea lespiaultii ZB2788 |
|
|
2035443 |
Genea lespiaultii ZB3343 |
|
|
2035514 |
Genea lespiaultii ZB397 |
|
|
2035546 |
Genea lespiaultii ZB406 |
|
|
2035487 |
Genea lobulata AH42940 |
|
|
2035517 |
Genea lobulata BM1043 |
|
|
2035581 |
Genea lobulata GK5078 |
|
|
2035574 |
Genea lobulata GK5384 |
|
|
2035530 |
Genea lobulata GK5770 |
|
|
2035520 |
Genea lobulata JC2 |
|
|
2035557 |
Genea lobulata JC4 |
|
|
2035483 |
Genea lobulata JC9 |
|
|
2035464 |
Genea lobulata PSS3501 |
|
|
2035470 |
Genea lobulata PSS3502 |
|
|
2035509 |
Genea lobulata VK2122 |
|
|
2035540 |
Genea lobulata VK2213 |
|
|
2035527 |
Genea lobulata VK2238 |
|
|
2035550 |
Genea lobulata VK2239 |
|
|
2035502 |
Genea mexicana CA03 |
|
|
2035554 |
Genea mexicana CA04 |
|
|
2035490 |
Genea mexicana HQ184958 |
|
|
2035472 |
Genea mexicana HQ184959 |
|
|
2035539 |
Genea mexicana JC13 |
|
|
2035543 |
Genea mexicana JC15 |
|
|
2035558 |
Genea mexicana JC24 |
|
|
2035452 |
Genea mexicana JC25 |
|
|
2035560 |
Genea mexicana JC26 |
|
|
2035582 |
Genea mexicana JC30 |
|
|
2035473 |
Genea mexicana JC5 |
|
|
2035431 |
Genea mexicana RM2231 |
|
|
2035606 |
Genea oxygala AVM1745 |
|
|
2035601 |
Genea oxygala AVM1842 |
|
|
2035537 |
Genea papillosa JF908020 |
|
|
2035419 |
Genea pinicola JC12 |
|
|
2035538 |
Genea pinicola VK2865 |
|
|
2035512 |
Genea pinicola VK825 |
|
|
2035535 |
Genea pseudobalsleyi CA01 |
|
|
2035455 |
Genea pseudobalsleyi JC29 |
|
|
2035459 |
Genea pseudobalsleyi ZB1458 |
|
|
2035588 |
Genea pseudobalsleyi ZB3804 |
|
|
2035402 |
Genea pseudobalsleyi ZB4192 |
|
|
2035579 |
Genea pseudoverrucosa AH39104 |
|
|
2035410 |
Genea pseudoverrucosa GK5088 |
|
|
2035476 |
Genea pseudoverrucosa GK5286 |
|
|
2035486 |
Genea pseudoverrucosa NVD |
|
|
2035524 |
Genea pseudoverrucosa ZB1473 |
|
|
2035533 |
Genea pseudoverrucosa ZB1948 |
|
|
2035591 |
Genea pseudoverrucosa ZB2386 |
|
|
2035564 |
Genea pseudoverrucosa ZB3445 |
|
|
2035408 |
Genea sp AY920529 |
|
|
2035614 |
Genea sp DQ220333 |
|
|
2035403 |
Genea sp FN669199 |
|
|
2035457 |
Genea sphaerica GH20100613 |
|
|
2035435 |
Genea sphaerica GH20100724 |
|
|
2035578 |
Genea sphaerica NVA |
|
|
2035551 |
Genea sphaerica NVF |
|
|
2035605 |
Genea thaxteri CA3 |
|
|
2035599 |
Genea thaxteri CA4 |
|
|
2035592 |
Genea thaxteri JC5 |
|
|
2035573 |
Genea thaxteroconfusa AVM1745 |
|
|
2035553 |
Genea thaxteroconfusa AVM1842 |
|
|
2035449 |
Genea thaxteroconfusa JC14 |
|
|
2035429 |
Genea tuberculata JC32 |
|
|
2035417 |
Genea tuberculata JC33 |
|
|
2035434 |
Genea tuberculata JC34 |
|
|
2035466 |
Genea vagans AH42939 |
|
|
2035458 |
Genea vagans H136 |
|
|
2035529 |
Genea vagans JC10 |
|
|
2035507 |
Genea vagans JC17 |
|
|
2035607 |
Genea vagans JMV20090922 6 |
|
|
2035532 |
Genea vagans JMV200909226 |
|
|
2035481 |
Genea vagans NVE |
|
|
2035589 |
Genea verrucosa AH38982 |
328502
|
1449711
|
2035576 |
Genea verrucosa AH38983 |
328502
|
1449711
|
2035506 |
Genea verrucosa AH42933 |
328502
|
1449711
|
2035570 |
Genea verrucosa AH42936 |
328502
|
1449711
|
2035485 |
Genea verrucosa AH42941 |
328502
|
1449711
|
2035544 |
Genea verrucosa AH42942 |
328502
|
1449711
|
2035545 |
Genea verrucosa AH42943 |
328502
|
1449711
|
2035461 |
Genea verrucosa AJ969624 |
328502
|
1449711
|
2035511 |
Genea verrucosa ALV2961 |
328502
|
1449711
|
2035456 |
Genea verrucosa ALV3164 |
328502
|
1449711
|
2035504 |
Genea verrucosa AM2452 |
328502
|
1449711
|
2035489 |
Genea verrucosa CA5 |
328502
|
1449711
|
2035432 |
Genea verrucosa CA6 |
328502
|
1449711
|
2035584 |
Genea verrucosa CA7 |
328502
|
1449711
|
2035611 |
Genea verrucosa DQ220335 |
328502
|
1449711
|
2035575 |
Genea verrucosa GK3806 |
328502
|
1449711
|
2035479 |
Genea verrucosa GK4684 |
328502
|
1449711
|
2035469 |
Genea verrucosa GK4960 |
328502
|
1449711
|
2035488 |
Genea verrucosa GK5776 |
328502
|
1449711
|
2035413 |
Genea verrucosa JC1 |
328502
|
1449711
|
2035471 |
Genea verrucosa JC11 |
328502
|
1449711
|
2035503 |
Genea verrucosa JC20 |
328502
|
1449711
|
2035427 |
Genea verrucosa NVM |
|
|
2035423 |
Genea verrucosa PSS3701 |
328502
|
1449711
|
2035496 |
Genea verrucosa PSS3702 |
328502
|
1449711
|
2035426 |
Genea verrucosa PSS3703 |
328502
|
1449711
|
2035548 |
Genea verrucosa PSS3704 |
328502
|
1449711
|
2035409 |
Genea verrucosa RM2113 |
328502
|
1449711
|
2035440 |
Genea verrucosa RM2117 |
328502
|
1449711
|
2035442 |
Genea verrucosa RM2131 |
328502
|
1449711
|
2035522 |
Genea verrucosa VK2132 |
328502
|
1449711
|
2035460 |
Genea verrucosa VK2231 |
328502
|
1449711
|
2035436 |
Genea verrucosa ZB1958 |
328502
|
1449711
|
2035594 |
Gilkeya compacta DQ206862 |
137250
|
10181692
|
2035415 |
Gilkeya compacta FJ789598 |
137250
|
10181692
|
2035450 |
Gilkeya sp JQ393054 |
|
|
2035612 |
Lasiobolidium spirale DQ220363 K |
352998
|
3195723
|
2035587 |
Uncultured AJ969436 |
|
|
2035477 |
Uncultured AY634166 |
|
|
2035552 |
Uncultured FJ197017 |
|
|
2035516 |
Uncultured HE687046 |
|
|
2035424 |
Uncultured JX625255 |
|
|