@ARTICLE{TreeBASE2Ref25978,
author = {Sandra Denman and Glynn Barrett and Susan A Kirk and James E. McDonald and Martin P. A. Coetzee},
title = {Identification of Armillaria species on oak in Britain: Implications for Oak Health},
year = {2016},
keywords = {},
doi = {},
url = {http://},
pmid = {},
journal = {International Journal of Forest Research},
volume = {},
number = {},
pages = {},
abstract = {The identity of 51 isolates of Armillaria obtained from 16 Quercus robur trees located at nine sites in England was determined using MLSA of three gene regions. Sequences of the ITS 1, IGS-1 and EF-1 gene regions were obtained by PCR amplification and sequencing, and phylogenetic trees were generated based on Maximum Likelihood and Bayesian inference of phylogenies. Four Armillaria species were isolated: A. gallica, A. mellea, A. ostoyae and A. tabescens. Armillaria gallica was isolated most frequently (40/51 isolates) but only from trees in woodlands. Armillaria mellea was isolated infrequently (3/51), only from trees in gardens, whereas A. tabescens, which was also isolated infrequently (4/51), was obtained from trees either in a garden or a parkland location. Armillaria ostoyae (4/51 isolates) was co-isolated with A. gallica raising interesting questions about the synecology of these species. The distribution of these four species of Armillaria in Britain and their possible roles in pathogenicity on oak are discussed. It is concluded that future studies are necessary to determine the role of Armillaria in Oak Declines, and that A. gallica should be a key focus but that other Armillaria species should not be excluded and investigation should include polymicrobial interactions with other microbes including bacteria and other Armillaria species.}
}
Taxa for tree 96573 of Study 19411

Citation title:
"Identification of Armillaria species on oak in Britain: Implications for Oak Health".

Study name:
"Identification of Armillaria species on oak in Britain: Implications for Oak Health".

This study is part of submission 19411
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
2327175 |
Armillaria borealis A1 JN657467 |
|
|
2327145 |
Armillaria borealis A2 HQ232287 |
|
|
2327159 |
Armillaria borealis A5 JN657468 |
|
|
2327185 |
Armillaria borealis A618 JN657469 |
|
|
2327179 |
Armillaria borealis A722 JN657470 |
|
|
2327155 |
Armillaria cepistipes B2 HQ232288 |
|
|
2327161 |
Armillaria cepistipes B3 JN657445 |
|
|
2327171 |
Armillaria cepistipes B5 JN657446 |
|
|
2327158 |
Armillaria cepistipes C13AE JN657447 |
|
|
2327147 |
Armillaria cepistipes C19AS2 JN657448 |
|
|
2327198 |
Armillaria cepistipes C5CS1 JN657450 |
|
|
2327188 |
Armillaria cepistipes S11AE JN657451 |
|
|
2327180 |
Armillaria cepistipes Y16AE JN657449 |
|
|
2327200 |
Armillaria gallica C1AS JN657456 |
|
|
2327136 |
Armillaria gallica E4 JN657452 |
|
|
2327152 |
Armillaria gallica E5 HQ232291 |
|
|
2327131 |
Armillaria gallica E6 JN657453 |
|
|
2327170 |
Armillaria gallica HY1 JN657454 |
|
|
2327202 |
Armillaria gallica HY2a JN657455 |
|
|
2327176 |
Armillaria gallica Y11DS1 JN657457 |
|
|
2327204 |
Armillaria gallica YC7S1 JN657458 |
|
|
2327122 |
Armillaria gallica CW18 |
47427
|
3044768
|
2327132 |
Armillaria gallica CW19 |
47427
|
3044768
|
2327183 |
Armillaria gallica CW21 |
47427
|
3044768
|
2327181 |
Armillaria gallica CW25 |
47427
|
3044768
|
2327160 |
Armillaria gallica CW27 |
47427
|
3044768
|
2327193 |
Armillaria gallica CW30 |
47427
|
3044768
|
2327126 |
Armillaria gallica CW33 |
47427
|
3044768
|
2327143 |
Armillaria gallica CW36 |
47427
|
3044768
|
2327154 |
Armillaria gallica CW37 |
47427
|
3044768
|
2327165 |
Armillaria gallica CW41 |
47427
|
3044768
|
2327207 |
Armillaria gallica CW49 |
47427
|
3044768
|
2327123 |
Armillaria gallica CW50 |
47427
|
3044768
|
2327150 |
Armillaria gallica CW51 |
47427
|
3044768
|
2327192 |
Armillaria gallica CW52 |
47427
|
3044768
|
2327166 |
Armillaria gallica FOD16 6 |
47427
|
3044768
|
2327146 |
Armillaria gallica FOD5 30 |
47427
|
3044768
|
2327142 |
Armillaria gallica FOD5 31 |
47427
|
3044768
|
2327157 |
Armillaria gallica FOD5 32 |
47427
|
3044768
|
2327189 |
Armillaria gallica FOD5 33 |
47427
|
3044768
|
2327130 |
Armillaria gallica FOD8 13 |
47427
|
3044768
|
2327151 |
Armillaria gallica FOD8 18 |
47427
|
3044768
|
2327141 |
Armillaria gallica FOD8 20 |
47427
|
3044768
|
2327127 |
Armillaria gallica FOD8 21 |
47427
|
3044768
|
2327133 |
Armillaria gallica GW19 |
47427
|
3044768
|
2327190 |
Armillaria gallica GW20 |
47427
|
3044768
|
2327125 |
Armillaria gallica MC22 |
47427
|
3044768
|
2327167 |
Armillaria gallica MC23 |
47427
|
3044768
|
2327201 |
Armillaria gallica MC24 |
47427
|
3044768
|
2327186 |
Armillaria gallica MC25 |
47427
|
3044768
|
2327205 |
Armillaria gallica MC26 |
47427
|
3044768
|
2327168 |
Armillaria gallica MC27 |
47427
|
3044768
|
2327206 |
Armillaria gallica MC28 |
47427
|
3044768
|
2327177 |
Armillaria gallica MC3 |
47427
|
3044768
|
2327195 |
Armillaria gallica MC5 |
47427
|
3044768
|
2327144 |
Armillaria gallica RW1 |
47427
|
3044768
|
2327169 |
Armillaria gallica RW2 |
47427
|
3044768
|
2327199 |
Armillaria gallica RW3 |
47427
|
3044768
|
2327178 |
Armillaria gallica RW4 |
47427
|
3044768
|
2327194 |
Armillaria gallica RW5 |
47427
|
3044768
|
2327197 |
Armillaria gallica RW60 |
47427
|
3044768
|
2327184 |
Armillaria mellea D1 JN657464 |
|
|
2327137 |
Armillaria mellea D4 HQ232290 |
|
|
2327156 |
Armillaria mellea D5 JN657465 |
|
|
2327187 |
Armillaria mellea HY3 JN657466 |
|
|
2327135 |
Armillaria mellea MCOLLINS12 |
47429
|
3094706
|
2327139 |
Armillaria mellea MCOLLINS15 |
47429
|
3094706
|
2327140 |
Armillaria mellea MK7 |
47429
|
3094706
|
2327172 |
Armillaria ostoyae C2 JN657459 |
|
|
2327153 |
Armillaria ostoyae C4 JN657460 |
|
|
2327191 |
Armillaria ostoyae C5 HQ232289 |
|
|
2327138 |
Armillaria ostoyae D20 JN657463 |
|
|
2327182 |
Armillaria ostoyae HpAg1 JN657462 |
|
|
2327129 |
Armillaria ostoyae Y17DS JN657461 |
|
|
2327124 |
Armillaria ostoyae CW48 |
47428
|
3048159
|
2327162 |
Armillaria ostoyae CW53 |
47428
|
3048159
|
2327149 |
Armillaria ostoyae CW54 |
47428
|
3048159
|
2327134 |
Armillaria ostoyae CW55 |
47428
|
3048159
|
2327173 |
Armillaria tabescens HAt1S5 HQ232292 |
|
|
2327148 |
Armillaria tabescens HAt2S5 HQ232293 |
|
|
2327196 |
Armillaria tabescens HAt5S3 HQ232294 |
|
|
2327128 |
Armillaria tabescens H21 |
47431
|
3264069
|
2327163 |
Armillaria tabescens OH86 |
47431
|
3264069
|
2327164 |
Armillaria tabescens OH87 |
47431
|
3264069
|
2327203 |
Armillaria tabescens OH88 |
47431
|
3264069
|
2327174 |
Moniliophthora roreri AY916746 |
221103
|
3197064
|