@ARTICLE{TreeBASE2Ref27676,
author = {Luis Javier Chueca and Benjamin Juan Gomez-Moliner and Maria Jose Madeira and Markus Pfenninger},
title = {Molecular phylogeny of Candidula (Geomitridae) land snails inferred from mitochondrial and nuclear markers reveals the polyphyly of the genus},
year = {2018},
keywords = {Candidula; dart sac; Helicoidea; land snails; Molecular phylogeny; Polyphyly;},
doi = {10.1016/j.ympev.2017.10.022},
url = {http://www.sciencedirect.com/science/article/pii/S1055790317302890},
pmid = {},
journal = {Molecular Phylogenetics and Evolution},
volume = {118},
number = {},
pages = {357--368},
abstract = {The genus Candidula (Geomitridae), consisting of 28 species in Western Europe, has a disjunct distribution in the Iberian Peninsula, Italy, the Balkans, the Aegean Islands, and one species on the Canary Islands. Although the genus is seemingly well defined by characters of the reproductive system, the relationships within the genus are still unclear and some authors have indicated a possible subgeneric division based on the internal morphology of the dart sac. Despite substantial phylogenetic incongruence, we present a well-resolved molecular phylogeny of Candidula based on two mitochondrial genes (COI and 16S rRNA), the nuclear rDNA region (5.8S rNRA + ITS2 + 28S rRNA) and seven additional nuclear DNA regions isolated specifically for this genus (60SL13, 60SL17, 60SL7, RPL14, 40SS6, 60SL9, 60SL13a), in total 5595 bp.
Two major clades were recovered including Candidula species, grouped into six monophyletic entities that have been defined as six new genera belonging to different tribes within Helicellinae. One major clade grouped species from southern France and Italy with the widely distributed species C. unifasciata. The second major clade grouped all the species from the Iberian Peninsula, including C. intersecta and C. gigaxii. Candidula ultima from the Canary Islands was recovered as separated lineage within the latter clade and related to African taxa. The incorporation of additional geomitrid genera allowed us to demonstrate the polyphyly of the genus Candidula. Moreover, we could show that similar structures of the stimulatory apparatus of the genital system in different taxa do not necessarily indicate a close phylogenetic relationship in the Geomitridae. More genera of the family are needed to clarify their evolutionary relationships, and to fully understand the evolution of the stimulatory apparatus of the genital system within the Geomitridae.
}
}
Taxa for tree 123601 of Study 21648

Citation title:
"Molecular phylogeny of Candidula (Geomitridae) land snails inferred from mitochondrial and nuclear markers reveals the polyphyly of the genus".

Study name:
"Molecular phylogeny of Candidula (Geomitridae) land snails inferred from mitochondrial and nuclear markers reveals the polyphyly of the genus".

This study is part of submission 21648
(Status: Published).
Taxa
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ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
1289331 |
Entonaema pallida AM9005911 |
477507
|
3160553
|
1289349 |
Entonaema pallida E8902E |
477507
|
3160553
|
1289356 |
Entonaema pallida PP92a |
477507
|
3160553
|
1289337 |
Fungal sp. ARIZ B400cA |
|
|
1289360 |
Fungal sp. ARIZ B400cC |
|
|
1289365 |
Fungus sp. 135 |
|
|
1289329 |
Fungus sp. 139 |
|
|
1289345 |
Fungus sp. 178 |
|
|
1289339 |
Fungus sp. 1809 |
|
|
1289335 |
Fungus sp. 438 |
|
|
1289358 |
Fungus sp. ARIZ B309 |
|
|
1289330 |
Fungus sp. ARIZ B311 |
|
|
1289364 |
Fungus sp. ARIZ B351 |
|
|
1289332 |
Fungus sp. ARIZ B353 |
|
|
1289342 |
Fungus sp. ARIZ B371 |
|
|
1289354 |
Fungus sp. ARIZ B435 |
|
|
1289350 |
Fungus sp. ARIZ B485 |
|
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1289369 |
Fungus sp. ARIZ B486 |
|
|
1289348 |
Fungus sp. ARIZ B494 |
|
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1289346 |
Fungus sp. ARIZ B541 |
|
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1289359 |
Fungus sp. ARIZ B544 |
|
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1289347 |
Fungus sp. F5071 |
|
|
1289362 |
Fungus sp. P1301A |
|
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1289357 |
Fungus sp. P1309B |
|
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1289351 |
Fungus sp. P1309D |
|
|
1289368 |
Fungus sp. P1315F |
|
|
1289334 |
Fungus sp. P1316C |
|
|
1289366 |
Fungus sp. P1702A |
|
|
1289361 |
Fungus sp.ARIZ B236cC |
|
|
1289363 |
Sordariomycetes sp. 204 |
|
|
1289336 |
Sordariomycetes sp. 314 |
|
|
1289341 |
Sordariomycetes sp. 314 JN4118061 |
|
|
1289367 |
Sordariomycetes sp. 314 JQ7602011 |
|
|
1289343 |
Sordariomycetes sp. 314 JQ7602331 |
|
|
1289333 |
Sordariomycetes sp. 314 JQ7602491 |
|
|
1289352 |
Sordariomycetes sp. 314 JQ7602601 |
|
|
1289338 |
Sordariomycetes sp. 314 JQ7603101 |
|
|
1289355 |
Sordariomycetes sp. 314 JQ7604121 |
|
|
1289340 |
Sordariomycetes sp. 314 JQ7606711 |
|
|
1289344 |
Sordariomycetes sp. 438 |
|
|
1289353 |
Xylaria hypoxylon AFTOLID |
37992
|
3126698
|