@ARTICLE{TreeBASE2Ref27676,
author = {Luis Javier Chueca and Benjamin Juan Gomez-Moliner and Maria Jose Madeira and Markus Pfenninger},
title = {Molecular phylogeny of Candidula (Geomitridae) land snails inferred from mitochondrial and nuclear markers reveals the polyphyly of the genus},
year = {2018},
keywords = {Candidula; dart sac; Helicoidea; land snails; Molecular phylogeny; Polyphyly;},
doi = {10.1016/j.ympev.2017.10.022},
url = {http://www.sciencedirect.com/science/article/pii/S1055790317302890},
pmid = {},
journal = {Molecular Phylogenetics and Evolution},
volume = {118},
number = {},
pages = {357--368},
abstract = {The genus Candidula (Geomitridae), consisting of 28 species in Western Europe, has a disjunct distribution in the Iberian Peninsula, Italy, the Balkans, the Aegean Islands, and one species on the Canary Islands. Although the genus is seemingly well defined by characters of the reproductive system, the relationships within the genus are still unclear and some authors have indicated a possible subgeneric division based on the internal morphology of the dart sac. Despite substantial phylogenetic incongruence, we present a well-resolved molecular phylogeny of Candidula based on two mitochondrial genes (COI and 16S rRNA), the nuclear rDNA region (5.8S rNRA + ITS2 + 28S rRNA) and seven additional nuclear DNA regions isolated specifically for this genus (60SL13, 60SL17, 60SL7, RPL14, 40SS6, 60SL9, 60SL13a), in total 5595 bp.
Two major clades were recovered including Candidula species, grouped into six monophyletic entities that have been defined as six new genera belonging to different tribes within Helicellinae. One major clade grouped species from southern France and Italy with the widely distributed species C. unifasciata. The second major clade grouped all the species from the Iberian Peninsula, including C. intersecta and C. gigaxii. Candidula ultima from the Canary Islands was recovered as separated lineage within the latter clade and related to African taxa. The incorporation of additional geomitrid genera allowed us to demonstrate the polyphyly of the genus Candidula. Moreover, we could show that similar structures of the stimulatory apparatus of the genital system in different taxa do not necessarily indicate a close phylogenetic relationship in the Geomitridae. More genera of the family are needed to clarify their evolutionary relationships, and to fully understand the evolution of the stimulatory apparatus of the genital system within the Geomitridae.
}
}
Taxa for Study 21648
Citation title:
"Molecular phylogeny of Candidula (Geomitridae) land snails inferred from mitochondrial and nuclear markers reveals the polyphyly of the genus".
Study name:
"Molecular phylogeny of Candidula (Geomitridae) land snails inferred from mitochondrial and nuclear markers reveals the polyphyly of the genus".
This study is part of submission 21648
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
3275557 |
Canariella hispidula 2167 |
|
|
3275670 |
Candidula arganica 1425 |
|
|
3275602 |
Candidula arganica 1441 |
|
|
3275619 |
Candidula arganica 1871 |
|
|
3275561 |
Candidula arrabidensis 1620 |
|
|
3275625 |
Candidula arrabidensis 1621 |
|
|
3275650 |
Candidula belemensis 1718 |
|
|
3275615 |
Candidula belemensis 1732 |
|
|
3275634 |
Candidula belemensis 1733 |
|
|
3275623 |
Candidula belemensis 1743 |
|
|
3275652 |
Candidula belemensis 1744 |
|
|
3275559 |
Candidula camporroblensis 1480 |
|
|
3275660 |
Candidula camporroblensis 1492 |
|
|
3275571 |
Candidula camporroblensis 1500 |
|
|
3275645 |
Candidula camporroblensis 1511 |
|
|
3275655 |
Candidula camporroblensis 1855 |
|
|
3275672 |
Candidula camporroblensis 1858 |
|
|
3275590 |
Candidula camporroblensis 1860 |
|
|
3275649 |
Candidula cavannae 1521 |
|
|
3275562 |
Candidula cavannae 1522 |
|
|
3275627 |
Candidula cavannae 1523 |
|
|
3275588 |
Candidula codia 1532 |
228093
|
5599034
|
3275582 |
Candidula corbellai 1537 |
|
|
3275639 |
Candidula corbellai 1539 |
|
|
3275565 |
Candidula coudensis 1864 |
|
|
3275578 |
Candidula fiorii 1547 |
|
|
3275632 |
Candidula fiorii 1548 |
|
|
3275667 |
Candidula gigaxii 1552 |
100453
|
5639187
|
3275666 |
Candidula gigaxii 1553 |
100453
|
5639187
|
3275556 |
Candidula gigaxii 1554 |
100453
|
5639187
|
3275665 |
Candidula gigaxii 1555 |
100453
|
5639187
|
3275656 |
Candidula gigaxii 1556 |
100453
|
5639187
|
3275570 |
Candidula gigaxii 1557 |
100453
|
5639187
|
3275647 |
Candidula grovesiana 1559 |
|
|
3275587 |
Candidula grovesiana 1573 |
|
|
3275579 |
Candidula grovesiana 1574 |
|
|
3275617 |
Candidula grovesiana 1575 |
|
|
3275567 |
Candidula intersecta 1576 |
228090
|
2688805
|
3275658 |
Candidula intersecta 1587 |
228090
|
2688805
|
3275642 |
Candidula intersecta 1597 |
228090
|
2688805
|
3275576 |
Candidula intersecta 1604 |
228090
|
2688805
|
3275653 |
Candidula intersecta 1610 |
228090
|
2688805
|
3275612 |
Candidula intersecta 1618 |
228090
|
2688805
|
3275597 |
Candidula najerensis 1640 |
|
|
3275604 |
Candidula najerensis 1645 |
|
|
3275663 |
Candidula najerensis 1659 |
|
|
3275646 |
Candidula najerensis 1692 |
|
|
3275621 |
Candidula najerensis 1693 |
|
|
3275583 |
Candidula najerensis 1698 |
|
|
3275657 |
Candidula najerensis 1699 |
|
|
3275654 |
Candidula najerensis 1856 |
|
|
3275644 |
Candidula olisippensis 1714 |
228094
|
5973169
|
3275624 |
Candidula olisippensis 1715 |
228094
|
5973169
|
3275661 |
Candidula olisippensis 1716 |
228094
|
5973169
|
3275603 |
Candidula ponsulensis 1634 |
|
|
3275669 |
Candidula rocandioi 1754 |
|
|
3275641 |
Candidula rocandioi 1755 |
|
|
3275638 |
Candidula rocandioi 1762 |
|
|
3275575 |
Candidula rocandioi 1868 |
|
|
3275622 |
Candidula rocandioi 1869 |
|
|
3275616 |
Candidula rocandioi 1870 |
|
|
3275574 |
Candidula rugosiuscula 1873 |
228091
|
5973167
|
3275633 |
Candidula rugosiuscula 1874 |
228091
|
5973167
|
3275580 |
Candidula rugosiuscula 1875 |
228091
|
5973167
|
3275668 |
Candidula scabiosula 1476 |
|
|
3275640 |
Candidula scabiosula 1477 |
|
|
3275605 |
Candidula scabiosula 1866 |
|
|
3275589 |
Candidula setubalensis 1777 |
|
|
3275651 |
Candidula setubalensis 1785 |
|
|
3275631 |
Candidula setubalensis 1786 |
|
|
3275635 |
Candidula spadae 1789 |
228092
|
5973168
|
3275599 |
Candidula spadae 1790 |
228092
|
5973168
|
3275628 |
Candidula spadae 1791 |
228092
|
5973168
|
3275614 |
Candidula spadae 1795 |
228092
|
5973168
|
3275659 |
Candidula spadae 1796 |
228092
|
5973168
|
3275613 |
Candidula ultima 1802 |
|
|
3275620 |
Candidula ultima 1807 |
|
|
3275610 |
Candidula unifasciata 1812 |
100452
|
5521616
|
3275636 |
Candidula unifasciata 1829 |
100452
|
5521616
|
3275596 |
Candidula unifasciata 1839 |
100452
|
5521616
|
3275630 |
Candidula unifasciata 1840 |
100452
|
5521616
|
3275618 |
Candidula unifasciata 1845 |
100452
|
5521616
|
3275637 |
Candidula unifasciata 1872 |
100452
|
5521616
|
3275584 |
Cernuella aginnica 1882 |
|
|
3275600 |
Cernuella neglecta 1019 |
265983
|
5488369
|
3275591 |
Cernuella virgata 1883 |
145650
|
2690500
|
3275569 |
Cernuella virgata 1884 |
145650
|
2690500
|
3275664 |
Cernuella virgata 1897 |
145650
|
2690500
|
3275586 |
Cernuellopsis ghisottii 1885 |
293453
|
5980249
|
3275554 |
Cochlidella acuta 1003 |
|
|
3275581 |
Discula polymorpha 2192 |
|
|
3275607 |
Helicella iberica 1888 |
|
|
3275563 |
Helicella itala 1887 |
76043
|
5575951
|
3275671 |
Helicella itala 1898 |
76043
|
5575951
|
3275601 |
Helicella ordunensis 1889 |
|
|
3275592 |
Helicella orzai 1026 |
|
|
3275573 |
Helicella valdeonna 1890 |
|
|
3275594 |
Helicopsis turcica 010211FR04 |
|
|
3275595 |
Hygromia lymbata 1027 |
|
|
3275566 |
Microxeromagna lowei 1891 |
|
|
3275626 |
Microxeromagna lowei 1899 |
|
|
3275648 |
Microxeromagna lowei 1900 |
|
|
3275629 |
Microxeromagna lowei 1901 |
|
|
3275598 |
Ponentina relevata 1034 |
|
|
3275560 |
Pyrenaearia carascalensis 1880 |
|
|
3275568 |
Trochoidea elegans 1310 |
266004
|
2688813
|
3275662 |
Trochoidea elegans 1895 |
266004
|
2688813
|
3275593 |
Trochoidea pyramidata 120110XT04 |
266005
|
5977490
|
3275643 |
Xeotricha gonzalezi 1886 |
|
|
3275585 |
Xerocrassa barceloi 1892 |
|
|
3275572 |
Xerocrassa cisternasi redonae 1894 |
|
|
3275606 |
Xerocrassa majoricensis 1300 |
|
|
3275558 |
Xerocrassa penchinati 1893 |
|
|
3275577 |
Xerosecta adolfi 1036 |
|
|
3275608 |
Xerosecta arigonis 1896 |
293447
|
5994316
|
3275609 |
Xerosecta promissa 1375 |
|
|
3275564 |
Xerosecta roboudiana 1037 |
|
|
3275555 |
Xerotricha apicina 2157 |
293461
|
5614809
|
3275611 |
Xerotricha gonzalezi 1886 |
|
|