@ARTICLE{TreeBASE2Ref26509,
author = {Pieter De Maayer and Don A Cowan},
title = {Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus},
year = {2016},
keywords = {Geobacillus; flagellin; post-translational modification; glycosylation; glycosyltransferase; pseudaminic acid},
doi = {},
url = {http://},
pmid = {},
journal = {BMC Genomics},
volume = {},
number = {},
pages = {},
abstract = {Background: Protein glycosylation involves the post-translational attachment of sugar chains to target proteins and has been observed in all three domains of life. Post-translational glycosylation of flagellin, the main structural protein of the flagellum, is a common characteristic among many Gram-negative bacteria and Archaea. Several distinct functions have been ascribed to flagellin glycosylation, including stabilisation and maintenance of the flagellar filament, motility, surface recognition, adhesion, and virulence. However, little is known about this trait among Gram-positive bacteria.
Results: Using comparative genomic approaches the flagellin glycosylation loci of multiple strains of the Gram-positive thermophilic genus Geobacillus were identified and characterized. Eighteen of thirty-six compared strains of the genus carry these loci, which show evidence of horizontal acquisition. The Geobacillus flagellin glycosylation islands (FGIs) can be clustered into five distinct types, which are predicted to encode highly variable glycans decorated with distinct and heavily modified sugars.
Conclusions: Our comparative genomic analyses showed that, while not universal, flagellin glycosylation islands are relatively common among members of the genus Geobacillus and that the encoded flagellin glycans are highly variable. This suggests that flagellin glycosylation plays an important role in the lifestyles of members of this thermophilic genus.
}
}
Taxa for matrix 38840 of Study 20124

Citation title:
"Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus".

Study name:
"Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus".

This study is part of submission 20124
(Status: Published).
Taxa
Return to matrix row view
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 2532950 |
Bacillus subtilis 168 |
1423
|
229777
|
| 2532941 |
Geobacillus caldoxylosilyticus CIC9 |
81408
|
2555902
|
| 2532981 |
Geobacillus caldoxylosilyticus DSM12041T |
81408
|
2555902
|
| 2532978 |
Geobacillus kaustophilus DSM7263T |
1462
|
2555903
|
| 2532954 |
Geobacillus kaustophilus GBlys |
|
|
| 2532947 |
Geobacillus kaustophilus HTA426 |
1462
|
2555903
|
| 2532942 |
Geobacillus lituanicus DSM15325T |
169283
|
3520104
|
| 2532943 |
Geobacillus sp. 10 |
|
|
| 2532955 |
Geobacillus sp. A8 |
|
|
| 2532969 |
Geobacillus sp. B23 |
|
|
| 2532951 |
Geobacillus sp. C56T2 |
|
|
| 2532975 |
Geobacillus sp. C56T3 |
|
|
| 2532979 |
Geobacillus sp. CAMR12739 |
|
|
| 2532965 |
Geobacillus sp. CAMR5420 |
|
|
| 2532964 |
Geobacillus sp. CCBUS3UF5 |
|
|
| 2532963 |
Geobacillus sp. Et74 |
|
|
| 2532960 |
Geobacillus sp. FW23 |
|
|
| 2532970 |
Geobacillus sp. GHH01 |
|
|
| 2532967 |
Geobacillus sp. JF8 |
|
|
| 2532944 |
Geobacillus sp. MAS1 |
|
|
| 2532948 |
Geobacillus sp. NUB3621 |
|
|
| 2532980 |
Geobacillus sp. PSS1 |
|
|
| 2532945 |
Geobacillus sp. PSS2 |
|
|
| 2532971 |
Geobacillus sp. WSUCF1 |
|
|
| 2532968 |
Geobacillus sp. Y412MC52 |
|
|
| 2532956 |
Geobacillus sp. Y412MC61 |
|
|
| 2532983 |
Geobacillus stearothermophilus 22 |
1422
|
2555904
|
| 2532952 |
Geobacillus stearothermophilus 53 |
1422
|
2555904
|
| 2532962 |
Geobacillus stearothermophilus ATCC12980T |
1422
|
2555904
|
| 2532974 |
Geobacillus stearothermophilus ATCC7953 |
1422
|
2555904
|
| 2532961 |
Geobacillus subterraneus DSM13552T |
129338
|
2555905
|
| 2532976 |
Geobacillus thermantarcticus D1T |
657269
|
|
| 2532984 |
Geobacillus thermocatenulatus DSM730T |
33938
|
2555906
|
| 2532966 |
Geobacillus thermocatenulatus GS1 |
33938
|
2555906
|
| 2532946 |
Geobacillus thermodenitrificans DSM465T |
33940
|
2555907
|
| 2532953 |
Geobacillus thermodenitrificans G11MC16 |
33940
|
2555907
|
| 2532985 |
Geobacillus thermodenitrificans NG802 |
33940
|
2555907
|
| 2532973 |
Geobacillus thermoglucosidans C56YS93 |
|
|
| 2532972 |
Geobacillus thermoglucosidans DSM2542T |
|
|
| 2532957 |
Geobacillus thermoglucosidans TNO0920 |
|
|
| 2532959 |
Geobacillus thermoglucosidans Y41MC1 |
|
|
| 2532958 |
Geobacillus thermoleovorans DSM5366T |
33941
|
2555909
|
| 2532949 |
Geobacillus toebii DSM14590T |
153151
|
3017407
|
| 2532982 |
Geobacillus toebii WCH70 |
153151
|
3017407
|
| 2532977 |
Geobacillus uzenensis XT |
|
|
| 2532986 |
Geobacillus vulcani DSM13174T |
135517
|
3520576
|