@ARTICLE{TreeBASE2Ref2138,
author = {Jorge Manuel Santos and Alan John Lander Phillips},
title = {Resolving the complex of Diaporthe (Phomopsis) species occurring on Foeniculum vulgare in Portugal.},
year = {2009},
keywords = {},
doi = {},
url = {http://www.fungaldiversity.org/fdp/sfdp/FD34-7.pdf},
pmid = {},
journal = {Fungal Diversity},
volume = {34},
number = {},
pages = {111--125},
abstract = {Diaporthe species and their Phomopsis anamorphs are endophytes and pathogens on a wide range of plant hosts, and are responsible for several diseases, some of which are of economic importance. Species in this genus have been described mainly on the basis of host association, and to a lesser extent on their micromorphology. However, studies have revealed that host association is of minor taxonomic importance, due to the wide host ranges of some species. Moreover, more than one species can occur on a single host. On the other hand, morphological characters are not always suitable for species definition because of their plasticity and overlap between different species. Foeniculum vulgare is an herbaceous plant known to harbour a complex of Diaporthe and Phomopsis species. In this study, this complex is resolved and several taxa are delineated. An intensive sampling of Diaporthe species and Phomopsis anamorphs found on F. vulgare in Portugal was done and a collection of isolates was established in culture. Isolates were characterised and grouped according to their microsatellite-primed PCR (MSP-PCR) profiles. Representative isolates were subsequently selected for a molecular phylogeny based on the rDNA ITS region (ITS15.8SITS2). Combining morphological, cultural and molecular data, four species were distinguished from F. vulgare. Diaporthe angelicae is proved to be the most common pathogen of this host in Portugal. Diaporthe lusitanicae is newly described, whereas the teleomorph of Phomopsis theicola was shown to be distinct from Diaporthe theicola, and is described as Diaporthe neotheicola.}
}
Taxa for Study 2201
Citation title:
"Resolving the complex of Diaporthe (Phomopsis) species occurring on Foeniculum vulgare in Portugal.".
This study was previously identified under the legacy study ID S2209
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
94692 |
Diaporthe ambigua AY485744 |
73123
|
3097777
|
94680 |
Diaporthe ambigua DQ286268 |
73123
|
3097777
|
94656 |
Diaporthe ambigua Di C002 9 |
73123
|
3097777
|
94665 |
Diaporthe ambigua Di C003 10 |
73123
|
3097777
|
94688 |
Diaporthe angelicae AY196778 |
230357
|
3280025
|
94662 |
Diaporthe angelicae AY196779 |
230357
|
3280025
|
94666 |
Diaporthe angelicae Ph C032 1 |
230357
|
3280025
|
94689 |
Diaporthe angelicae Ph C068 2 |
230357
|
3280025
|
94682 |
Diaporthe angelicae Ph C094 2 |
230357
|
3280025
|
94671 |
Diaporthe angelicae Ph C098 2 |
230357
|
3280025
|
94658 |
Diaporthe angelicae Ph C118 1 |
230357
|
3280025
|
94664 |
Diaporthe angelicae Ph C121 1 |
230357
|
3280025
|
94679 |
Diaporthe angelicae Ph C133 1 |
230357
|
3280025
|
94670 |
Diaporthe angelicae Ph C135 1 |
230357
|
3280025
|
94669 |
Diaporthe angelicae Ph C142 2 |
230357
|
3280025
|
94686 |
Diaporthe angelicae Ph C150 1 |
230357
|
3280025
|
94675 |
Diaporthe angelicae Ph C159 1 |
230357
|
3280025
|
94687 |
Diaporthe angelicae Ph C165 2 |
230357
|
3280025
|
94681 |
Diaporthe angelicae Ph C166 1 |
230357
|
3280025
|
94668 |
Diaporthe angelicae Ph C168 1 |
230357
|
3280025
|
94678 |
Diaporthe helianthi AY485748 |
158607
|
3915928
|
94677 |
Diaporthe helianthi AY485749 |
158607
|
3915928
|
94672 |
Diaporthe lusitanicae Di C001 5 |
|
|
94676 |
Diaporthe lusitanicae Ph C086 2 |
|
|
94655 |
Diaporthe lusitanicae Ph C170 1 |
|
|
94660 |
Diaporthe neotheicola Di C004 5 |
|
|
94663 |
Diaporthe sp EU311605 |
|
|
94667 |
Diaporthe sp EU311606 |
|
|
94659 |
Leucostoma persoonii DQ996042 |
5119
|
3147776
|
94657 |
Phomopsis sp AB302247 |
|
|
94674 |
Phomopsis sp AF102999 |
|
|
94684 |
Phomopsis sp DQ286285 |
|
|
94673 |
Phomopsis sp EU002917 |
|
|
94661 |
Phomopsis sp EU512922 |
|
|
94685 |
Phomopsis sp7 AY485742 |
|
|
94690 |
Phomopsis theicola AY485723 |
359331
|
3284573
|
94683 |
Phomopsis theicola DQ286286 |
359331
|
3284573
|
94691 |
Valsa ceratosperma DQ241769 |
117550
|
3152064
|